RNA–Protein interactions for RNA: ENST00000492826.1

GCFC2-210, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-210ENST00000492826 PCLOQ9Y6V0 5065 aa-0.24□□□□□ -2.45
GCFC2-210ENST00000492826 MYO3AQ8NEV4 1616 aa-0.24□□□□□ -2.45
GCFC2-210ENST00000492826 AKAP13Q12802 2813 aa-0.24□□□□□ -2.45
GCFC2-210ENST00000492826 C4AP0C0L4 1744 aa-0.24□□□□□ -2.45
GCFC2-210ENST00000492826 C4BP0C0L5 1744 aa-0.24□□□□□ -2.45
GCFC2-210ENST00000492826 TIAM2Q8IVF5 1701 aa-0.24□□□□□ -2.45
GCFC2-210ENST00000492826 DOT1LQ8TEK3 1739 aa-0.24□□□□□ -2.45
GCFC2-210ENST00000492826 PPLO60437 1756 aa-0.24□□□□□ -2.45
GCFC2-210ENST00000492826 NBASA2RRP1 2371 aa-0.25□□□□□ -2.45
GCFC2-210ENST00000492826 SETD2Q9BYW2 2564 aaPredicted RBP-0.25□□□□□ -2.45
GCFC2-210ENST00000492826 APOBP04114 4563 aaKnown RBP-0.25□□□□□ -2.45
GCFC2-210ENST00000492826 A0A1B0GUT8 65 aa-0.25□□□□□ -2.45
GCFC2-210ENST00000492826 PLGLAQ15195 96 aa-0.25□□□□□ -2.45
GCFC2-210ENST00000492826 DNAH6Q9C0G6 4158 aa-0.25□□□□□ -2.45
GCFC2-210ENST00000492826 ALKQ9UM73 1620 aa-0.25□□□□□ -2.45
GCFC2-210ENST00000492826 CUBNO60494 3623 aa-0.25□□□□□ -2.45
GCFC2-210ENST00000492826 DNAH9Q9NYC9 4486 aa-0.26□□□□□ -2.45
GCFC2-210ENST00000492826 TRANK1O15050 2925 aa-0.26□□□□□ -2.45
GCFC2-210ENST00000492826 NBEAL1Q6ZS30 2694 aa-0.26□□□□□ -2.45
GCFC2-210ENST00000492826 CNOT1A5YKK6 2376 aaKnown RBP-0.26□□□□□ -2.45
GCFC2-210ENST00000492826 PCNX1Q96RV3 2341 aa-0.26□□□□□ -2.45
GCFC2-210ENST00000492826 LTN1O94822 1766 aa-0.26□□□□□ -2.45
GCFC2-210ENST00000492826 IQCF6A8MYZ5 107 aa-0.26□□□□□ -2.45
GCFC2-210ENST00000492826 NMSQ5H8A3 153 aa-0.26□□□□□ -2.45
GCFC2-210ENST00000492826 SACSQ9NZJ4 4579 aa-0.26□□□□□ -2.45
GCFC2-210ENST00000492826 UBR4Q5T4S7 5183 aa-0.26□□□□□ -2.45
GCFC2-210ENST00000492826 DMXL1Q9Y485 3027 aa-0.27□□□□□ -2.45
GCFC2-210ENST00000492826 ADAMTS12P58397 1594 aa-0.27□□□□□ -2.45
GCFC2-210ENST00000492826 LRRC7Q96NW7 1537 aa-0.27□□□□□ -2.45
GCFC2-210ENST00000492826 HERC1Q15751 4861 aa-0.27□□□□□ -2.45
GCFC2-210ENST00000492826 AKAP9Q99996 3911 aa-0.27□□□□□ -2.45
GCFC2-210ENST00000492826 CYB5AP00167 134 aa-0.27□□□□□ -2.45
GCFC2-210ENST00000492826 COX7BP24311 80 aa-0.27□□□□□ -2.45
GCFC2-210ENST00000492826 RPL38P63173 70 aaKnown RBP-0.27□□□□□ -2.45
GCFC2-210ENST00000492826 WFDC13Q8IUB5 93 aa-0.27□□□□□ -2.45
GCFC2-210ENST00000492826 DSPP15924 2871 aaKnown RBP-0.27□□□□□ -2.45
GCFC2-210ENST00000492826 STAB2Q8WWQ8 2551 aa-0.27□□□□□ -2.45
GCFC2-210ENST00000492826 PTPN23Q9H3S7 1636 aa-0.27□□□□□ -2.45
GCFC2-210ENST00000492826 NF1P21359 2839 aa-0.28□□□□□ -2.45
GCFC2-210ENST00000492826 USH2AO75445 5202 aa-0.28□□□□□ -2.45
GCFC2-210ENST00000492826 DNAH3Q8TD57 4116 aa-0.28□□□□□ -2.45
GCFC2-210ENST00000492826 FAT1Q14517 4588 aa-0.28□□□□□ -2.45
GCFC2-210ENST00000492826 GAFA1Q96PS6 74 aa-0.28□□□□□ -2.45
GCFC2-210ENST00000492826 V9GYS6 101 aa-0.28□□□□□ -2.45
GCFC2-210ENST00000492826 ANK3Q12955 4377 aaKnown RBP-0.28□□□□□ -2.45
GCFC2-210ENST00000492826 KALRNO60229 2985 aa-0.28□□□□□ -2.45
GCFC2-210ENST00000492826 MAGI2Q86UL8 1455 aa-0.29□□□□□ -2.46
GCFC2-210ENST00000492826 TACC2O95359 2948 aa-0.29□□□□□ -2.46
GCFC2-210ENST00000492826 TJP1Q07157 1748 aa-0.29□□□□□ -2.46
GCFC2-210ENST00000492826 VPS13DQ5THJ4 4388 aa-0.29□□□□□ -2.46
GCFC2-210ENST00000492826 SONP18583 2426 aaKnown RBP-0.29□□□□□ -2.46
GCFC2-210ENST00000492826 PREX1Q8TCU6 1659 aa-0.29□□□□□ -2.46
GCFC2-210ENST00000492826 SPRR2EP22531 72 aa-0.29□□□□□ -2.46
GCFC2-210ENST00000492826 SPRR2AP35326 72 aa-0.29□□□□□ -2.46
GCFC2-210ENST00000492826 C9orf62Q8N4C0 152 aa-0.29□□□□□ -2.46
GCFC2-210ENST00000492826 LAMA1P25391 3075 aa-0.29□□□□□ -2.46
GCFC2-210ENST00000492826 USP32Q8NFA0 1604 aa-0.29□□□□□ -2.46
GCFC2-210ENST00000492826 HECTD1Q9ULT8 2610 aa-0.29□□□□□ -2.46
GCFC2-210ENST00000492826 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.29□□□□□ -2.46
GCFC2-210ENST00000492826 HTTP42858 3142 aa-0.29□□□□□ -2.46
GCFC2-210ENST00000492826 A0A0C4DFX4 3053 aa-0.29□□□□□ -2.46
GCFC2-210ENST00000492826 ARFGEF2Q9Y6D5 1785 aa-0.29□□□□□ -2.46
GCFC2-210ENST00000492826 CEP162Q5TB80 1403 aa-0.3□□□□□ -2.46
GCFC2-210ENST00000492826 NEXMIFQ5QGS0 1516 aa-0.3□□□□□ -2.46
GCFC2-210ENST00000492826 MXRA5Q9NR99 2828 aa-0.3□□□□□ -2.46
GCFC2-210ENST00000492826 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.3□□□□□ -2.46
GCFC2-210ENST00000492826 CREBBPQ92793 2442 aa-0.3□□□□□ -2.46
GCFC2-210ENST00000492826 SPENQ96T58 3664 aaKnown RBP-0.31□□□□□ -2.46
GCFC2-210ENST00000492826 NESP48681 1621 aa-0.31□□□□□ -2.46
GCFC2-210ENST00000492826 SPTBN4Q9H254 2564 aa-0.31□□□□□ -2.46
GCFC2-210ENST00000492826 MUC17Q685J3 4493 aa-0.31□□□□□ -2.46
GCFC2-210ENST00000492826 HIVEP1P15822 2718 aa-0.31□□□□□ -2.46
GCFC2-210ENST00000492826 RGPD8O14715 1765 aaPredicted RBP-0.31□□□□□ -2.46
GCFC2-210ENST00000492826 RGPD5Q99666 1765 aa-0.31□□□□□ -2.46
GCFC2-210ENST00000492826 KRTAP19-8Q3LI54 63 aa-0.31□□□□□ -2.46
GCFC2-210ENST00000492826 PYY3Q5JQD4 70 aa-0.31□□□□□ -2.46
GCFC2-210ENST00000492826 WFDC9Q8NEX5 89 aa-0.31□□□□□ -2.46
GCFC2-210ENST00000492826 S100A16Q96FQ6 103 aaKnown RBP-0.31□□□□□ -2.46
GCFC2-210ENST00000492826 TROQ12816 1431 aaPredicted RBP-0.31□□□□□ -2.46
GCFC2-210ENST00000492826 CICQ96RK0 1608 aaPredicted RBP-0.31□□□□□ -2.46
GCFC2-210ENST00000492826 PDE4DIPQ5VU43 2346 aa-0.32□□□□□ -2.46
GCFC2-210ENST00000492826 WIZO95785 1651 aa-0.32□□□□□ -2.46
GCFC2-210ENST00000492826 PLCH1Q4KWH8 1693 aa-0.32□□□□□ -2.46
GCFC2-210ENST00000492826 LRRC9Q6ZRR7 1453 aa-0.32□□□□□ -2.46
GCFC2-210ENST00000492826 DNAH2Q9P225 4427 aa-0.32□□□□□ -2.46
GCFC2-210ENST00000492826 K7EP34 96 aa-0.32□□□□□ -2.46
GCFC2-210ENST00000492826 NBEAL2Q6ZNJ1 2754 aa-0.32□□□□□ -2.46
GCFC2-210ENST00000492826 HERC2O95714 4834 aa-0.32□□□□□ -2.46
GCFC2-210ENST00000492826 DIP2BQ9P265 1576 aa-0.32□□□□□ -2.46
GCFC2-210ENST00000492826 DNAH11Q96DT5 4516 aa-0.32□□□□□ -2.46
GCFC2-210ENST00000492826 DNAH1Q9P2D7 4330 aa-0.32□□□□□ -2.46
GCFC2-210ENST00000492826 PARP4Q9UKK3 1724 aaKnown RBP-0.33□□□□□ -2.46
GCFC2-210ENST00000492826 ATP7BP35670 1465 aa-0.33□□□□□ -2.46
GCFC2-210ENST00000492826 MYMXA0A1B0GTQ4 84 aa-0.33□□□□□ -2.46
GCFC2-210ENST00000492826 KRTAP20-2Q3LI61 65 aa-0.33□□□□□ -2.46
GCFC2-210ENST00000492826 TTC37Q6PGP7 1564 aa-0.33□□□□□ -2.46
GCFC2-210ENST00000492826 BPTFQ12830 3046 aa-0.34□□□□□ -2.46
GCFC2-210ENST00000492826 TDRG1Q3Y452 100 aa-0.34□□□□□ -2.46
GCFC2-210ENST00000492826 DDX60LQ5H9U9 1706 aaKnown RBP-0.34□□□□□ -2.46
GCFC2-210ENST00000492826 SPRR2FQ96RM1 72 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms