RNA–Protein interactions for RNA: ENST00000492826.1

GCFC2-210, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 3

Gene GCFC2, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-210	ENST00000492826	AEBP2	Q6ZN18	517 aa	Predicted RBP	24.68	■■□□□ 1.54
GCFC2-210	ENST00000492826	CHIC1	Q5VXU3	224 aa		22.92	■■□□□ 1.26
GCFC2-210	ENST00000492826	SENP3	Q9H4L4	574 aa	Predicted RBP	21.02	■□□□□ 0.96
GCFC2-210	ENST00000492826	PHF23	Q9BUL5	403 aa	Predicted RBP	20.72	■□□□□ 0.91
GCFC2-210	ENST00000492826	FOXD1	Q16676	465 aa		19.73	■□□□□ 0.75
GCFC2-210	ENST00000492826	POTED	Q86YR6	584 aa		19.07	■□□□□ 0.64
GCFC2-210	ENST00000492826	MSH5	O43196	834 aa		18.57	■□□□□ 0.56
GCFC2-210	ENST00000492826	PIAS4	Q8N2W9	510 aa	Predicted RBP	18.24	■□□□□ 0.51
GCFC2-210	ENST00000492826	PPP6R1	Q9UPN7	881 aa		18.1	■□□□□ 0.49
GCFC2-210	ENST00000492826	PLPPR3	Q6T4P5	718 aa		18	■□□□□ 0.47
GCFC2-210	ENST00000492826	ADRA2B	P18089	450 aa		17.96	■□□□□ 0.47
GCFC2-210	ENST00000492826	MAPK8IP2	Q13387	824 aa	Predicted RBP	16.68	■□□□□ 0.26
GCFC2-210	ENST00000492826	DMRT2	Q9Y5R5	561 aa		16.63	■□□□□ 0.25
GCFC2-210	ENST00000492826	SCAF1	Q9H7N4	1312 aa	Known RBP	16.31	■□□□□ 0.2
GCFC2-210	ENST00000492826	CACNB1	Q02641	598 aa	Predicted RBP	16.24	■□□□□ 0.19
GCFC2-210	ENST00000492826	DCAF8L1	A6NGE4	600 aa		15.87	■□□□□ 0.13
GCFC2-210	ENST00000492826	RNF39	Q9H2S5	420 aa		15.86	■□□□□ 0.13
GCFC2-210	ENST00000492826	HOXD11	P31277	338 aa	Predicted RBP	15.83	■□□□□ 0.12
GCFC2-210	ENST00000492826	PPP4R3CP	Q6ZMV5	832 aa		15.74	■□□□□ 0.11
GCFC2-210	ENST00000492826	C1QBP	Q07021	282 aa	Known RBP	15.56	■□□□□ 0.08
GCFC2-210	ENST00000492826	CNKSR2	Q8WXI2	1034 aa		15.54	■□□□□ 0.08
GCFC2-210	ENST00000492826	RNF216	Q9NWF9	866 aa	Predicted RBP	15.54	■□□□□ 0.08
GCFC2-210	ENST00000492826	DNAJC5B	Q9UF47	199 aa		15.37	■□□□□ 0.05
GCFC2-210	ENST00000492826	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	15	□□□□□ -0.01
GCFC2-210	ENST00000492826	NCBP3	Q53F19	620 aa	Known RBP	14.89	□□□□□ -0.03
GCFC2-210	ENST00000492826	POTEH	Q6S545	545 aa		14.81	□□□□□ -0.04
GCFC2-210	ENST00000492826	NPM3	O75607	178 aa	Known RBP	14.78	□□□□□ -0.04
GCFC2-210	ENST00000492826		U3KPZ7	1027 aa	Predicted RBP	14.71	□□□□□ -0.05
GCFC2-210	ENST00000492826	DSG3	P32926	999 aa		14.68	□□□□□ -0.06
GCFC2-210	ENST00000492826	SPINK5	Q9NQ38	1064 aa	Predicted RBP	14.65	□□□□□ -0.06
GCFC2-210	ENST00000492826	CAPN15	O75808	1086 aa		14.56	□□□□□ -0.08
GCFC2-210	ENST00000492826	SLC4A2	P04920	1241 aa		14.3	□□□□□ -0.12
GCFC2-210	ENST00000492826	ABCB7	O75027	752 aa		14.22	□□□□□ -0.13
GCFC2-210	ENST00000492826	TRH	P20396	242 aa	Predicted RBP	14.22	□□□□□ -0.13
GCFC2-210	ENST00000492826	ZNF219	Q9P2Y4	722 aa	Predicted RBP	14.16	□□□□□ -0.14
GCFC2-210	ENST00000492826	APLP2	Q06481	763 aa		14.09	□□□□□ -0.15
GCFC2-210	ENST00000492826	KCNA4	P22459	653 aa		14.06	□□□□□ -0.16
GCFC2-210	ENST00000492826	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	14	□□□□□ -0.17
GCFC2-210	ENST00000492826	HNRNPUL2	Q1KMD3	747 aa	Known RBP	14	□□□□□ -0.17
GCFC2-210	ENST00000492826	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.93	□□□□□ -0.18
GCFC2-210	ENST00000492826	RBM42	Q9BTD8	480 aa	Known RBP	13.93	□□□□□ -0.18
GCFC2-210	ENST00000492826	CHRDL2	Q6WN34	429 aa		13.88	□□□□□ -0.19
GCFC2-210	ENST00000492826	POLA2	Q14181	598 aa		13.75	□□□□□ -0.21
GCFC2-210	ENST00000492826	SP7	Q8TDD2	431 aa	Predicted RBP	13.64	□□□□□ -0.23
GCFC2-210	ENST00000492826	MYCN	P04198	464 aa	Predicted RBP	13.63	□□□□□ -0.23
GCFC2-210	ENST00000492826	AKT1S1	Q96B36	256 aa		13.54	□□□□□ -0.24
GCFC2-210	ENST00000492826	PIP4P2	Q8N4L2	257 aa		13.47	□□□□□ -0.25
GCFC2-210	ENST00000492826	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.46	□□□□□ -0.25
GCFC2-210	ENST00000492826	REM2	Q8IYK8	340 aa	Predicted RBP	13.44	□□□□□ -0.26
GCFC2-210	ENST00000492826	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.36	□□□□□ -0.27
GCFC2-210	ENST00000492826	OSCAR	Q8IYS5	282 aa		13.35	□□□□□ -0.27
GCFC2-210	ENST00000492826	PITPNM1	O00562	1244 aa		13.32	□□□□□ -0.28
GCFC2-210	ENST00000492826	FXR2	P51116	673 aa	Known RBP eCLIP	13.32	□□□□□ -0.28
GCFC2-210	ENST00000492826	HAX1	O00165	279 aa		13.3	□□□□□ -0.28
GCFC2-210	ENST00000492826	FOXD4L1	Q9NU39	408 aa		13.23	□□□□□ -0.29
GCFC2-210	ENST00000492826	EVX2	Q03828	476 aa		13.22	□□□□□ -0.29
GCFC2-210	ENST00000492826	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.11	□□□□□ -0.31
GCFC2-210	ENST00000492826	ZBTB22	O15209	634 aa		12.98	□□□□□ -0.33
GCFC2-210	ENST00000492826	SPDYE2B	A6NHP3	402 aa		12.96	□□□□□ -0.33
GCFC2-210	ENST00000492826	SPDYE6	P0CI01	402 aa		12.96	□□□□□ -0.33
GCFC2-210	ENST00000492826	SPDYE2	Q495Y8	402 aa		12.96	□□□□□ -0.33
GCFC2-210	ENST00000492826	PRKAR2A	P13861	404 aa	Known RBP	12.93	□□□□□ -0.34
GCFC2-210	ENST00000492826	C19orf67	A6NJJ6	358 aa		12.91	□□□□□ -0.34
GCFC2-210	ENST00000492826	ATXN8OS	P0DMR3	200 aa		12.86	□□□□□ -0.35
GCFC2-210	ENST00000492826	GABBR2	O75899	941 aa		12.83	□□□□□ -0.36
GCFC2-210	ENST00000492826	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.83	□□□□□ -0.36
GCFC2-210	ENST00000492826	CLEC11A	Q9Y240	323 aa		12.83	□□□□□ -0.36
GCFC2-210	ENST00000492826	FBLN2	P98095	1184 aa		12.82	□□□□□ -0.36
GCFC2-210	ENST00000492826	MKRN4P	Q13434	485 aa	Predicted RBP	12.81	□□□□□ -0.36
GCFC2-210	ENST00000492826	SSUH2	Q9Y2M2	353 aa		12.79	□□□□□ -0.36
GCFC2-210	ENST00000492826	LHX8	Q68G74	356 aa		12.78	□□□□□ -0.36
GCFC2-210	ENST00000492826	CHADL	Q6NUI6	762 aa		12.71	□□□□□ -0.37
GCFC2-210	ENST00000492826	ZNF692	Q9BU19	519 aa	Predicted RBP	12.71	□□□□□ -0.37
GCFC2-210	ENST00000492826	POTEI	P0CG38	1075 aa		12.62	□□□□□ -0.39
GCFC2-210	ENST00000492826	PRR29	P0C7W0	189 aa		12.55	□□□□□ -0.4
GCFC2-210	ENST00000492826	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.52	□□□□□ -0.41
GCFC2-210	ENST00000492826	CD44	P16070	742 aa	Known RBP	12.48	□□□□□ -0.41
GCFC2-210	ENST00000492826	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.46	□□□□□ -0.41
GCFC2-210	ENST00000492826	CLCN6	P51797	869 aa		12.37	□□□□□ -0.43
GCFC2-210	ENST00000492826	PLSCR2	Q9NRY7	297 aa		12.33	□□□□□ -0.44
GCFC2-210	ENST00000492826	ZNF579	Q8NAF0	562 aa	Known RBP	12.3	□□□□□ -0.44
GCFC2-210	ENST00000492826	DCBLD2	Q96PD2	775 aa		12.29	□□□□□ -0.44
GCFC2-210	ENST00000492826	OTUD5	Q96G74	571 aa		12.22	□□□□□ -0.45
GCFC2-210	ENST00000492826	ZRANB1	Q9UGI0	708 aa		12.22	□□□□□ -0.45
GCFC2-210	ENST00000492826	GALR2	O43603	387 aa	Predicted RBP	12.2	□□□□□ -0.46
GCFC2-210	ENST00000492826	CREBZF	Q9NS37	354 aa		12.2	□□□□□ -0.46
GCFC2-210	ENST00000492826	POTEB2	H3BUK9	544 aa		12.19	□□□□□ -0.46
GCFC2-210	ENST00000492826	POTEM	A6NI47	508 aa		12.05	□□□□□ -0.48
GCFC2-210	ENST00000492826	PELP1	Q8IZL8	1130 aa	Known RBP	12.05	□□□□□ -0.48
GCFC2-210	ENST00000492826	PHF12	Q96QT6	1004 aa		12.05	□□□□□ -0.48
GCFC2-210	ENST00000492826	STAG3	Q9UJ98	1225 aa		12.02	□□□□□ -0.49
GCFC2-210	ENST00000492826	POTEG	Q6S5H5	508 aa		12.01	□□□□□ -0.49
GCFC2-210	ENST00000492826	MNX1	P50219	401 aa	Predicted RBP	11.97	□□□□□ -0.49
GCFC2-210	ENST00000492826	POTEJ	P0CG39	1038 aa		11.96	□□□□□ -0.49
GCFC2-210	ENST00000492826	PAK3	O75914	559 aa	Predicted RBP	11.93	□□□□□ -0.5
GCFC2-210	ENST00000492826	ASTL	Q6HA08	431 aa	Predicted RBP	11.91	□□□□□ -0.5
GCFC2-210	ENST00000492826	METRN	Q9UJH8	293 aa		11.88	□□□□□ -0.51
GCFC2-210	ENST00000492826	ATMIN	O43313	823 aa	Predicted RBP	11.87	□□□□□ -0.51
GCFC2-210	ENST00000492826	LCE2D	Q5TA82	110 aa	Predicted RBP	11.87	□□□□□ -0.51
GCFC2-210	ENST00000492826	CSRNP3	Q8WYN3	585 aa		11.87	□□□□□ -0.51

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