RNA–Protein interactions for RNA: ENST00000480548.5

SGIP1-209, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 5

Gene SGIP1, Length 801 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-209ENST00000480548 ZNF469Q96JG9 3925 aaPredicted RBP1.31□□□□□ -2.2
SGIP1-209ENST00000480548 PARP4Q9UKK3 1724 aaKnown RBP1.31□□□□□ -2.2
SGIP1-209ENST00000480548 FBN2P35556 2912 aa1.31□□□□□ -2.2
SGIP1-209ENST00000480548 NHSQ6T4R5 1651 aa1.3□□□□□ -2.2
SGIP1-209ENST00000480548 SFTA3P0C7M3 94 aa1.3□□□□□ -2.2
SGIP1-209ENST00000480548 CDKN2A-AS1Q9UH64 79 aa1.3□□□□□ -2.2
SGIP1-209ENST00000480548 CNOT1A5YKK6 2376 aaKnown RBP1.3□□□□□ -2.2
SGIP1-209ENST00000480548 UBL5Q9BZL1 73 aa1.29□□□□□ -2.2
SGIP1-209ENST00000480548 TPRP12270 2363 aaKnown RBP1.29□□□□□ -2.2
SGIP1-209ENST00000480548 GVINP1Q7Z2Y8 2422 aa1.29□□□□□ -2.2
SGIP1-209ENST00000480548 NDUFA3O95167 84 aa1.28□□□□□ -2.2
SGIP1-209ENST00000480548 KLK9Q2XQG4 91 aa1.28□□□□□ -2.2
SGIP1-209ENST00000480548 DEFB109BQ30KR1 87 aa1.28□□□□□ -2.2
SGIP1-209ENST00000480548 LELP1Q5T871 98 aa1.28□□□□□ -2.2
SGIP1-209ENST00000480548 CCDC180Q9P1Z9 1646 aa1.28□□□□□ -2.2
SGIP1-209ENST00000480548 TNCP24821 2201 aa1.27□□□□□ -2.21
SGIP1-209ENST00000480548 SPINK4O60575 86 aa1.27□□□□□ -2.21
SGIP1-209ENST00000480548 CSMD3Q7Z407 3707 aa1.27□□□□□ -2.21
SGIP1-209ENST00000480548 LINC01549A6NIU2 74 aa1.26□□□□□ -2.21
SGIP1-209ENST00000480548 PRH1P02810 166 aa1.26□□□□□ -2.21
SGIP1-209ENST00000480548 KRTAP2-3P0C7H8 128 aa1.26□□□□□ -2.21
SGIP1-209ENST00000480548 KRTAP2-4Q9BYR9 128 aa1.26□□□□□ -2.21
SGIP1-209ENST00000480548 KRTAP2-1Q9BYU5 128 aa1.26□□□□□ -2.21
SGIP1-209ENST00000480548 NESP48681 1621 aa1.26□□□□□ -2.21
SGIP1-209ENST00000480548 SMIM5Q71RC9 77 aa1.25□□□□□ -2.21
SGIP1-209ENST00000480548 KCNQ1DNQ9H478 68 aa1.25□□□□□ -2.21
SGIP1-209ENST00000480548 TNRC6CQ9HCJ0 1690 aaKnown RBP1.25□□□□□ -2.21
SGIP1-209ENST00000480548 AKAP6Q13023 2319 aa1.24□□□□□ -2.21
SGIP1-209ENST00000480548 NOTCH1P46531 2555 aa1.24□□□□□ -2.21
SGIP1-209ENST00000480548 PKDREJQ9NTG1 2253 aa1.23□□□□□ -2.21
SGIP1-209ENST00000480548 NRAPQ86VF7 1730 aa1.23□□□□□ -2.21
SGIP1-209ENST00000480548 DEFB131BA0A096LNP1 70 aa1.22□□□□□ -2.21
SGIP1-209ENST00000480548 MRPL33O75394 65 aaKnown RBP1.22□□□□□ -2.21
SGIP1-209ENST00000480548 SPINK1P00995 79 aa1.22□□□□□ -2.21
SGIP1-209ENST00000480548 REV3LO60673 3130 aa1.21□□□□□ -2.22
SGIP1-209ENST00000480548 WFDC13Q8IUB5 93 aa1.21□□□□□ -2.22
SGIP1-209ENST00000480548 PRO3102Q9H379 93 aa1.2□□□□□ -2.22
SGIP1-209ENST00000480548 DDX60LQ5H9U9 1706 aaKnown RBP1.2□□□□□ -2.22
SGIP1-209ENST00000480548 ETDCA0A1B0GVM5 59 aa1.19□□□□□ -2.22
SGIP1-209ENST00000480548 SMR3AQ99954 134 aa1.19□□□□□ -2.22
SGIP1-209ENST00000480548 CRCT1Q9UGL9 99 aa1.18□□□□□ -2.22
SGIP1-209ENST00000480548 TIAM1Q13009 1591 aa1.17□□□□□ -2.22
SGIP1-209ENST00000480548 LINC00158P58513 81 aa1.17□□□□□ -2.22
SGIP1-209ENST00000480548 KRTAP4-1Q9BYQ7 146 aa1.17□□□□□ -2.22
SGIP1-209ENST00000480548 ABCA6Q8N139 1617 aa1.16□□□□□ -2.22
SGIP1-209ENST00000480548 TJP1Q07157 1748 aa1.15□□□□□ -2.23
SGIP1-209ENST00000480548 CRIP1P50238 77 aa1.14□□□□□ -2.23
SGIP1-209ENST00000480548 DEFB114Q30KQ6 69 aa1.14□□□□□ -2.23
SGIP1-209ENST00000480548 CHD6Q8TD26 2715 aa1.13□□□□□ -2.23
SGIP1-209ENST00000480548 TENM4Q6N022 2769 aa1.13□□□□□ -2.23
SGIP1-209ENST00000480548 ZFYVE26Q68DK2 2539 aa1.12□□□□□ -2.23
SGIP1-209ENST00000480548 ATRQ13535 2644 aa1.11□□□□□ -2.23
SGIP1-209ENST00000480548 FCGBPQ9Y6R7 5405 aaPredicted RBP1.11□□□□□ -2.23
SGIP1-209ENST00000480548 VWFP04275 2813 aa1.11□□□□□ -2.23
SGIP1-209ENST00000480548 ABCC6O95255 1503 aa1.1□□□□□ -2.23
SGIP1-209ENST00000480548 EEA1Q15075 1411 aa1.1□□□□□ -2.23
SGIP1-209ENST00000480548 H0YAA0 97 aa1.1□□□□□ -2.23
SGIP1-209ENST00000480548 U3KQA8 63 aa1.1□□□□□ -2.23
SGIP1-209ENST00000480548 OTOGQ6ZRI0 2925 aa1.1□□□□□ -2.23
SGIP1-209ENST00000480548 RNF17Q9BXT8 1623 aaKnown RBP1.1□□□□□ -2.23
SGIP1-209ENST00000480548 C4AP0C0L4 1744 aa1.09□□□□□ -2.23
SGIP1-209ENST00000480548 C4BP0C0L5 1744 aa1.09□□□□□ -2.23
SGIP1-209ENST00000480548 GLI2P10070 1586 aa1.09□□□□□ -2.23
SGIP1-209ENST00000480548 IGF2RP11717 2491 aa1.09□□□□□ -2.23
SGIP1-209ENST00000480548 FCER1GP30273 86 aa1.08□□□□□ -2.24
SGIP1-209ENST00000480548 UNC79Q9P2D8 2635 aa1.08□□□□□ -2.24
SGIP1-209ENST00000480548 BPTFQ12830 3046 aa1.07□□□□□ -2.24
SGIP1-209ENST00000480548 ABCA10Q8WWZ4 1543 aa1.07□□□□□ -2.24
SGIP1-209ENST00000480548 PRXQ9BXM0 1461 aa1.06□□□□□ -2.24
SGIP1-209ENST00000480548 PLXNC1O60486 1568 aa1.06□□□□□ -2.24
SGIP1-209ENST00000480548 THOC2Q8NI27 1593 aaKnown RBP1.06□□□□□ -2.24
SGIP1-209ENST00000480548 TRANK1O15050 2925 aa1.06□□□□□ -2.24
SGIP1-209ENST00000480548 ALS2Q96Q42 1657 aa1.06□□□□□ -2.24
SGIP1-209ENST00000480548 SPTA1P02549 2419 aa1.06□□□□□ -2.24
SGIP1-209ENST00000480548 KNL1Q8NG31 2342 aa1.05□□□□□ -2.24
SGIP1-209ENST00000480548 CPS1P31327 1500 aa1.04□□□□□ -2.24
SGIP1-209ENST00000480548 DEPDC5O75140 1603 aa1.04□□□□□ -2.24
SGIP1-209ENST00000480548 LYNX1G3V0Z9 82 aa1.03□□□□□ -2.24
SGIP1-209ENST00000480548 K7EMI3 77 aa1.03□□□□□ -2.24
SGIP1-209ENST00000480548 NCBP2-AS2Q69YL0 99 aa1.03□□□□□ -2.24
SGIP1-209ENST00000480548 C3P01024 1663 aa1.03□□□□□ -2.24
SGIP1-209ENST00000480548 LOC730098B7Z3J9 87 aa1.02□□□□□ -2.25
SGIP1-209ENST00000480548 NMES1Q9C002 83 aa1.02□□□□□ -2.25
SGIP1-209ENST00000480548 PREX2Q70Z35 1606 aa1.01□□□□□ -2.25
SGIP1-209ENST00000480548 M0R1W7 72 aa1.01□□□□□ -2.25
SGIP1-209ENST00000480548 CSPG4Q6UVK1 2322 aa1□□□□□ -2.25
SGIP1-209ENST00000480548 SERF2P84101 59 aa1□□□□□ -2.25
SGIP1-209ENST00000480548 WNK2Q9Y3S1 2297 aa1□□□□□ -2.25
SGIP1-209ENST00000480548 NCOR1O75376 2440 aa0.99□□□□□ -2.25
SGIP1-209ENST00000480548 USP24Q9UPU5 2620 aa0.99□□□□□ -2.25
SGIP1-209ENST00000480548 IAPPP10997 89 aa0.98□□□□□ -2.25
SGIP1-209ENST00000480548 MUC5BQ9HC84 5762 aaPredicted RBP0.97□□□□□ -2.25
SGIP1-209ENST00000480548 UGGT1Q9NYU2 1555 aa0.97□□□□□ -2.25
SGIP1-209ENST00000480548 BSNQ9UPA5 3926 aa0.97□□□□□ -2.25
SGIP1-209ENST00000480548 DEFB130BP0DP73 79 aa0.97□□□□□ -2.25
SGIP1-209ENST00000480548 DEFB130AP0DP74 79 aa0.97□□□□□ -2.25
SGIP1-209ENST00000480548 LY75O60449 1722 aa0.96□□□□□ -2.26
SGIP1-209ENST00000480548 PTPN13Q12923 2485 aa0.96□□□□□ -2.26
SGIP1-209ENST00000480548 ABCA2Q9BZC7 2435 aa0.96□□□□□ -2.26
SGIP1-209ENST00000480548 CHD8Q9HCK8 2581 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms