RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 ALMS1Q8TCU4 4167 aa0.1□□□□□ -2.39
GTF3C3-209ENST00000466862 KMT2AQ03164 3969 aa0.1□□□□□ -2.39
GTF3C3-209ENST00000466862 RRBP1Q9P2E9 1410 aaKnown RBP0.1□□□□□ -2.39
GTF3C3-209ENST00000466862 IGSF10Q6WRI0 2623 aa0.1□□□□□ -2.39
GTF3C3-209ENST00000466862 UBR5O95071 2799 aaPredicted RBP0.1□□□□□ -2.39
GTF3C3-209ENST00000466862 TIAM2Q8IVF5 1701 aa0.1□□□□□ -2.39
GTF3C3-209ENST00000466862 PRKDCP78527 4128 aaKnown RBP0.1□□□□□ -2.39
GTF3C3-209ENST00000466862 DMBT1Q9UGM3 2413 aaPredicted RBP0.09□□□□□ -2.39
GTF3C3-209ENST00000466862 ABCC1P33527 1531 aa0.09□□□□□ -2.39
GTF3C3-209ENST00000466862 TNRC6CQ9HCJ0 1690 aaKnown RBP0.09□□□□□ -2.39
GTF3C3-209ENST00000466862 IFI6P09912 130 aa0.09□□□□□ -2.4
GTF3C3-209ENST00000466862 DEFB121Q5J5C9 76 aa0.09□□□□□ -2.4
GTF3C3-209ENST00000466862 ATP5EP2Q5VTU8 51 aa0.09□□□□□ -2.4
GTF3C3-209ENST00000466862 CDKN2A-AS1Q9UH64 79 aa0.09□□□□□ -2.4
GTF3C3-209ENST00000466862 NWD1Q149M9 1564 aa0.09□□□□□ -2.4
GTF3C3-209ENST00000466862 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.09□□□□□ -2.42e-12■■■■■ 46.8
GTF3C3-209ENST00000466862 RGPD8O14715 1765 aaPredicted RBP0.09□□□□□ -2.4
GTF3C3-209ENST00000466862 RGPD5Q99666 1765 aa0.09□□□□□ -2.4
GTF3C3-209ENST00000466862 ARFGEF2Q9Y6D5 1785 aa0.09□□□□□ -2.4
GTF3C3-209ENST00000466862 ABCA2Q9BZC7 2435 aa0.08□□□□□ -2.4
GTF3C3-209ENST00000466862 CSPG4Q6UVK1 2322 aa0.08□□□□□ -2.4
GTF3C3-209ENST00000466862 PKD1L1Q8TDX9 2849 aa0.08□□□□□ -2.4
GTF3C3-209ENST00000466862 CACNA1AO00555 2505 aa0.08□□□□□ -2.4
GTF3C3-209ENST00000466862 A0A087WXM4 84 aa0.08□□□□□ -2.4
GTF3C3-209ENST00000466862 NDUFA3O95167 84 aa0.08□□□□□ -2.4
GTF3C3-209ENST00000466862 SPRR2DP22532 72 aa0.08□□□□□ -2.4
GTF3C3-209ENST00000466862 WFDC13Q8IUB5 93 aa0.08□□□□□ -2.4
GTF3C3-209ENST00000466862 HSPG2P98160 4391 aa0.08□□□□□ -2.4
GTF3C3-209ENST00000466862 NESP48681 1621 aa0.08□□□□□ -2.4
GTF3C3-209ENST00000466862 LRP1BQ9NZR2 4599 aa0.08□□□□□ -2.4
GTF3C3-209ENST00000466862 PTPN13Q12923 2485 aa0.08□□□□□ -2.4
GTF3C3-209ENST00000466862 MAP3K1Q13233 1512 aa0.08□□□□□ -2.4
GTF3C3-209ENST00000466862 C4AP0C0L4 1744 aa0.07□□□□□ -2.4
GTF3C3-209ENST00000466862 C4BP0C0L5 1744 aa0.07□□□□□ -2.4
GTF3C3-209ENST00000466862 ABCA8O94911 1581 aa0.07□□□□□ -2.4
GTF3C3-209ENST00000466862 UMAD1C9J7I0 102 aa0.07□□□□□ -2.4
GTF3C3-209ENST00000466862 M0R2T5 61 aa0.07□□□□□ -2.4
GTF3C3-209ENST00000466862 SMIM13P0DJ93 91 aa0.07□□□□□ -2.4
GTF3C3-209ENST00000466862 NREPQ16612 68 aa0.07□□□□□ -2.4
GTF3C3-209ENST00000466862 CFAP43Q8NDM7 1665 aa0.07□□□□□ -2.4
GTF3C3-209ENST00000466862 LRRIQ1Q96JM4 1722 aa0.07□□□□□ -2.4
GTF3C3-209ENST00000466862 HECTD4Q9Y4D8 3996 aa0.06□□□□□ -2.4
GTF3C3-209ENST00000466862 ATRQ13535 2644 aa0.06□□□□□ -2.4
GTF3C3-209ENST00000466862 PTPN23Q9H3S7 1636 aa0.06□□□□□ -2.4
GTF3C3-209ENST00000466862 ANKARQ7Z5J8 1434 aa0.06□□□□□ -2.4
GTF3C3-209ENST00000466862 PLCH1Q4KWH8 1693 aa0.06□□□□□ -2.4
GTF3C3-209ENST00000466862 CCDC88BA6NC98 1476 aa0.06□□□□□ -2.4
GTF3C3-209ENST00000466862 IFI27P40305 119 aaPredicted RBP0.06□□□□□ -2.4
GTF3C3-209ENST00000466862 COX6B2Q6YFQ2 88 aa0.06□□□□□ -2.4
GTF3C3-209ENST00000466862 C18orf32Q8TCD1 76 aa0.06□□□□□ -2.4
GTF3C3-209ENST00000466862 SPRR2GQ9BYE4 73 aa0.06□□□□□ -2.4
GTF3C3-209ENST00000466862 RICTORQ6R327 1708 aa0.06□□□□□ -2.4
GTF3C3-209ENST00000466862 SCN11AQ9UI33 1791 aa0.06□□□□□ -2.4
GTF3C3-209ENST00000466862 COL7A1Q02388 2944 aa0.06□□□□□ -2.4
GTF3C3-209ENST00000466862 LCE6AA0A183 80 aa0.05□□□□□ -2.4
GTF3C3-209ENST00000466862 NDUFA4O00483 81 aa0.05□□□□□ -2.4
GTF3C3-209ENST00000466862 ADAMTS12P58397 1594 aa0.05□□□□□ -2.4
GTF3C3-209ENST00000466862 SPTA1P02549 2419 aa0.05□□□□□ -2.4
GTF3C3-209ENST00000466862 EP300Q09472 2414 aaPredicted RBP0.05□□□□□ -2.4
GTF3C3-209ENST00000466862 IQGAP3Q86VI3 1631 aa0.05□□□□□ -2.4
GTF3C3-209ENST00000466862 LRP2P98164 4655 aa0.05□□□□□ -2.4
GTF3C3-209ENST00000466862 CD163L1Q9NR16 1453 aa0.04□□□□□ -2.4
GTF3C3-209ENST00000466862 HMGA1P17096 107 aaKnown RBP0.04□□□□□ -2.4
GTF3C3-209ENST00000466862 DEFB135Q30KP9 77 aa0.04□□□□□ -2.4
GTF3C3-209ENST00000466862 MYO5CQ9NQX4 1742 aa0.04□□□□□ -2.4
GTF3C3-209ENST00000466862 CICQ96RK0 1608 aaPredicted RBP0.03□□□□□ -2.4
GTF3C3-209ENST00000466862 EIF2AK4Q9P2K8 1649 aaKnown RBP0.03□□□□□ -2.4
GTF3C3-209ENST00000466862 DEFA5Q01523 94 aa0.03□□□□□ -2.4
GTF3C3-209ENST00000466862 PRO3102Q9H379 93 aa0.03□□□□□ -2.4
GTF3C3-209ENST00000466862 DDX60LQ5H9U9 1706 aaKnown RBP0.03□□□□□ -2.4
GTF3C3-209ENST00000466862 LMTK2Q8IWU2 1503 aa0.03□□□□□ -2.41
GTF3C3-209ENST00000466862 CHD8Q9HCK8 2581 aa0.02□□□□□ -2.41
GTF3C3-209ENST00000466862 PLXNC1O60486 1568 aa0.02□□□□□ -2.41
GTF3C3-209ENST00000466862 CNOT1A5YKK6 2376 aaKnown RBP0.02□□□□□ -2.41
GTF3C3-209ENST00000466862 H3BVH4 76 aa0.02□□□□□ -2.41
GTF3C3-209ENST00000466862 FLNCQ14315 2725 aa0.02□□□□□ -2.41
GTF3C3-209ENST00000466862 ANKRD50Q9ULJ7 1429 aa0.02□□□□□ -2.41
GTF3C3-209ENST00000466862 UGGT2Q9NYU1 1516 aa0.02□□□□□ -2.41
GTF3C3-209ENST00000466862 KNL1Q8NG31 2342 aa0.01□□□□□ -2.41
GTF3C3-209ENST00000466862 H0YAA0 97 aa0.01□□□□□ -2.41
GTF3C3-209ENST00000466862 C3orf79P0CE67 100 aa0.01□□□□□ -2.41
GTF3C3-209ENST00000466862 SPRR2BP35325 72 aa0.01□□□□□ -2.41
GTF3C3-209ENST00000466862 LINC00158P58513 81 aa0.01□□□□□ -2.41
GTF3C3-209ENST00000466862 TRANK1O15050 2925 aa0.01□□□□□ -2.41
GTF3C3-209ENST00000466862 DCHS2Q6V1P9 2916 aa0.01□□□□□ -2.41
GTF3C3-209ENST00000466862 WIZO95785 1651 aa0.01□□□□□ -2.41
GTF3C3-209ENST00000466862 PARP4Q9UKK3 1724 aaKnown RBP0.01□□□□□ -2.41
GTF3C3-209ENST00000466862 COL6A3P12111 3177 aa0□□□□□ -2.41
GTF3C3-209ENST00000466862 HFM1A2PYH4 1435 aa0□□□□□ -2.41
GTF3C3-209ENST00000466862 MAP1BP46821 2468 aaKnown RBP0□□□□□ -2.41
GTF3C3-209ENST00000466862 CDC42BPGQ6DT37 1551 aa0□□□□□ -2.41
GTF3C3-209ENST00000466862 WNK1Q9H4A3 2382 aa0□□□□□ -2.41
GTF3C3-209ENST00000466862 SETXQ7Z333 2677 aaKnown RBP-0□□□□□ -2.41
GTF3C3-209ENST00000466862 NRAPQ86VF7 1730 aa-0.01□□□□□ -2.41
GTF3C3-209ENST00000466862 DEPDC5O75140 1603 aa-0.01□□□□□ -2.41
GTF3C3-209ENST00000466862 DIP2AQ14689 1571 aa-0.01□□□□□ -2.41
GTF3C3-209ENST00000466862 RALGAPBQ86X10 1494 aa-0.01□□□□□ -2.41
GTF3C3-209ENST00000466862 SMCO4Q9NRQ5 59 aa-0.01□□□□□ -2.41
GTF3C3-209ENST00000466862 HILPDAQ9Y5L2 63 aa-0.01□□□□□ -2.41
GTF3C3-209ENST00000466862 APC2O95996 2303 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms