RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Zdbf2Q5SS00 2493 aaKnown RBP11.42□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Cpsf4lE9Q2N0 280 aa11.42□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Folr2Q05685 251 aa11.42□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Spsb3Q571F5 354 aa11.42□□□□□ -0.58
Col3a1-201ENSMUST00000087883 3110018I06RikQ9CXS0 120 aa11.42□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Gm10521E9PZK0 135 aa11.41□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Frem3Q5H8B9 2123 aa11.41□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Ccl12Q62401 104 aa11.41□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Trav9-1A0A075B601 112 aa11.41□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Mapk1ip1Q9D7G9 263 aa11.41□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Clec5aQ9R007 190 aa11.41□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Dpm2Q9Z324 84 aa11.41□□□□□ -0.58
Col3a1-201ENSMUST00000087883 P01788 123 aa11.41□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Lypd1Q8BLC3 141 aa11.41□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Rhno1Q8K3A4 235 aa11.41□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Olfr1195Q8VG21 308 aa11.41□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Ighv1-34A0A075B5V2 117 aa11.41□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Tcrg-C3L7N479 172 aa11.41□□□□□ -0.58
Col3a1-201ENSMUST00000087883 P03985 172 aa11.41□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Tomm40Q9QYA2 361 aa11.41□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Tmem92B7ZWI3 162 aa11.4□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Klk1b4P00757 256 aa11.4□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Gm7102J3QQ10 178 aa11.4□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Pglyrp4Q0VB07 374 aa11.4□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Alpk2Q91ZB0 2144 aa11.4□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Ighv3-8A0A075B5T0 131 aa11.4□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Ighv1-49A0A0A6YWX2 117 aa11.4□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Nr2c2apQ3TV70 140 aa11.4□□□□□ -0.58
Col3a1-201ENSMUST00000087883 Mogat1Q91ZV4 335 aa11.4□□□□□ -0.58
Col3a1-201ENSMUST00000087883 P04219 140 aa11.4□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Trbv30A0A0B4J1P1 111 aa11.39□□□□□ -0.59
Col3a1-201ENSMUST00000087883 1500009C09RikD3YYW9 81 aa11.39□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Msrb3Q8BU85 253 aa11.39□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Brca1P48754 1812 aa11.39□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Trav7-1A0A0G2JEV5 112 aa11.39□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Igkv9-123A0A140T8N8 117 aa11.39□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Vdac2Q60930 295 aaKnown RBP11.39□□□□□ -0.59
Col3a1-201ENSMUST00000087883 LenepQ9WVB6 61 aa11.39□□□□□ -0.59
Col3a1-201ENSMUST00000087883 F8Q06194 2319 aa11.39□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Bcorl1A2AQH4 1781 aa11.39□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Klk4Q9Z0M1 255 aa11.39□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Cxcl13O55038 109 aa11.39□□□□□ -0.59
Col3a1-201ENSMUST00000087883 CntfrO88507 372 aa11.39□□□□□ -0.59
Col3a1-201ENSMUST00000087883 P01787 123 aa11.39□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Plekhb2Q9QZC7 221 aa11.39□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Gm27027S4R1M6 97 aa11.39□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Mtatp8P03930 67 aa11.38□□□□□ -0.59
Col3a1-201ENSMUST00000087883 IappP12968 93 aa11.38□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Gm5105Q8C6Y9 112 aa11.38□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Tmem190Q9D2E9 166 aa11.38□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Gm16686Q3UMN9 131 aa11.38□□□□□ -0.59
Col3a1-201ENSMUST00000087883 SpinklQ8CEK3 90 aa11.38□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Ankrd39Q9D2X0 183 aa11.38□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Igkv4-62A0A0G2JDW9 117 aa11.38□□□□□ -0.59
Col3a1-201ENSMUST00000087883 AdmP97297 184 aa11.38□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Timm21Q8CCM6 249 aa11.38□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Pradc1Q9D9N8 188 aa11.38□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Gbf1Q6DFZ1 1861 aa11.38□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Brd3osA0A1B0GRB6 84 aa11.38□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Pfn1P62962 140 aa11.38□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Ighv1-18A0A0A6YXN4 117 aa11.37□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Csrp2P97314 193 aaKnown RBP11.37□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Prr3Q811B5 190 aaKnown RBP11.37□□□□□ -0.59
Col3a1-201ENSMUST00000087883 C1qtnf5Q8K479 243 aa11.37□□□□□ -0.59
Col3a1-201ENSMUST00000087883 P01896 185 aa11.37□□□□□ -0.59
Col3a1-201ENSMUST00000087883 P18528 98 aa11.37□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Tcrg-C1A0A075B5Z0 172 aa11.37□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Igkv4-53A0A0G2JFC6 119 aa11.37□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Rpl36aP83882 106 aaKnown RBP11.37□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Ighv1-26A0A075B5V0 117 aa11.37□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Rpp25lQ99JH1 163 aa11.37□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Trav6-4A0A075B6B4 115 aa11.36□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Cd59aO55186 123 aa11.36□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Card19Q9D1I2 183 aa11.36□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Ca5aP23589 299 aa11.36□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Cacna1aP97445 2368 aa11.36□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Cacna1iE9Q7P2 2199 aa11.36□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Trav9d-1A0A075B699 112 aa11.36□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Igkv4-80A0A075B5L7 116 aa11.35□□□□□ -0.59
Col3a1-201ENSMUST00000087883 P01655 112 aa11.35□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Gemin7Q9CWY4 129 aa11.35□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Kif26bQ7TNC6 2112 aa11.35□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Ighv1-81A0A075B5Y4 117 aa11.35□□□□□ -0.59
Col3a1-201ENSMUST00000087883 P01790 122 aa11.35□□□□□ -0.59
Col3a1-201ENSMUST00000087883 9430097D07RikQ8BS47 195 aa11.35□□□□□ -0.59
Col3a1-201ENSMUST00000087883 F930015N05RikQ8C3A3 210 aa11.35□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Vwc2lQ505H4 222 aa11.35□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Igkv13-85A0A075B666 115 aa11.35□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Usmg5Q78IK2 58 aa11.35□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Igkv14-111A0A140T8P9 117 aa11.35□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Ube2wQ8VDW4 151 aa11.35□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Tmem86bQ497J1 226 aa11.34□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Igkv4-57-1A0A075B5M4 119 aa11.34□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Gm10447Q3UQ92 135 aa11.34□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Rnf144bQ8BKD6 301 aa11.34□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Defa27F2Z403 93 aa11.34□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Lamtor3O88653 124 aa11.34□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Xcl1P47993 114 aa11.34□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Lypd8Q9D7S0 255 aa11.34□□□□□ -0.59
Col3a1-201ENSMUST00000087883 Ighv14-1A0A075B5R4 117 aa11.34□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 50.7 ms