RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Nhlrc4Q3UP44 136 aa6.99□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Cdkn2aQ64364 169 aa6.99□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Higd2aQ9CQJ1 106 aa6.99□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Trav4d-3A0A075B625 110 aa6.98□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Fgf12P61329 243 aa6.98□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Sostdc1Q9CQN4 206 aa6.98□□□□□ -1.29
Clcn3-202ENSMUST00000056508 5530401A14RikQ9D3H9 131 aa6.98□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Folr2Q05685 251 aa6.98□□□□□ -1.29
Clcn3-202ENSMUST00000056508 SinhcafQ8C8M1 221 aaKnown RBP6.98□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Defb11Q8R2I7 77 aa6.98□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Gm17660B9UIU9 90 aa6.98□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Defb10Q8R2I8 73 aa6.98□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Trav15d-2-dv6d-2A0A0G2JGQ7 117 aa6.98□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Cxcl12P40224 93 aa6.98□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Ccl21bP86792 133 aa6.98□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Ccl21cP86793 133 aa6.98□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Lgals2Q9CQW5 130 aa6.98□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Ly6iQ9WU67 134 aa6.98□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Igkv12-44A0A140T8M2 115 aa6.98□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Tnfrsf1bP25119 474 aa6.98□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Smim6Q3U0I6 56 aa6.98□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Cxcl3Q6W5C0 100 aa6.98□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Kif1aP33173 1695 aa6.98□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Myh10Q61879 1976 aaKnown RBP6.97□□□□□ -1.29
Clcn3-202ENSMUST00000056508 TnnQ80Z71 1560 aa6.97□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Cdc42bpaQ3UU96 1719 aa6.97□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Ighv8-11A0A075B5X4 119 aa6.97□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Trav6n-6A0A075B6B2 114 aa6.97□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Cmc4Q61908 68 aa6.97□□□□□ -1.29
Clcn3-202ENSMUST00000056508 NpffQ9WVA8 114 aa6.97□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Myh7bA2AQP0 1941 aa6.97□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Gm21863J3KMP8 111 aa6.97□□□□□ -1.29
Clcn3-202ENSMUST00000056508 DnmbpQ6TXD4 1580 aa6.97□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Tmem167bQ80X45 74 aa6.97□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Ear6Q923L7 155 aa6.97□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Setbp1Q9Z180 1582 aa6.97□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Sod1P08228 154 aaKnown RBP6.96□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Tcl1b4P56844 120 aa6.96□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Nabp2Q8R2Y9 212 aa6.96□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Fndc3c1Q6DFV6 1356 aa6.96□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Dip2cE9PWR4 1557 aa6.96□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Gm10203F6QJ09 66 aa6.96□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Glipr2Q9CYL5 154 aa6.96□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Depdc5P61460 1591 aa6.96□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Ighv14-3A0A075B5R9 117 aa6.96□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Ccl20O89093 97 aa6.96□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Defb41Q30KP6 65 aa6.96□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Gm5447Q8BPB2 115 aa6.96□□□□□ -1.3
Clcn3-202ENSMUST00000056508 RhohQ9D3G9 191 aa6.96□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Cep170bQ80U49 1574 aa6.96□□□□□ -1.3
Clcn3-202ENSMUST00000056508 P04219 140 aa6.96□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Cnep1r1Q3UJ81 125 aa6.96□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Pla2g2dQ9WVF6 144 aa6.96□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Ube2dnl2A2AFH2 155 aa6.96□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Lbhd2G3UW55 114 aa6.95□□□□□ -1.3
Clcn3-202ENSMUST00000056508 P01793 123 aa6.95□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Gm16686Q3UMN9 131 aa6.95□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Chchd10Q7TNL9 138 aa6.95□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Ighv8-6A0A0A6YXA3 118 aa6.95□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Gm21983D6RFS9 131 aa6.95□□□□□ -1.3
Clcn3-202ENSMUST00000056508 P01786 117 aa6.95□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Ly6fP35460 134 aa6.95□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Ccl21aP84444 133 aa6.95□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Zfp420Q7TMN8 578 aa6.95□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Sdf2l1Q9ESP1 221 aa6.95□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Ighv7-1A0A075B5S2 121 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Igf1P05017 153 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Defb48Q3UW22 87 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 SostQ99P68 211 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Ccl25O35903 144 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Trav9-4A0A0B4J1K2 113 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Ighv1-74A0A0G2JGK2 117 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 P01750 117 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Phxr5P08399 672 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Cox7cP17665 63 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Kif20bQ80WE4 1774 aaKnown RBP6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 P01787 123 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 P01788 123 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 P01791 123 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Gnb4P29387 340 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Saa4P31532 130 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Btg2Q04211 158 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Krtap15-1Q9QZU5 150 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Nrxn1Q9CS84 1514 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Ighv5-15A0A0A6YWC7 117 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Cox8aQ64445 69 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Rnf222Q8CEF8 211 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Ubl5Q9EPV8 73 aa6.94□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Arid1bE9Q4N7 2244 aa6.93□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Trav4-3A0A0B4J1K1 110 aa6.93□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Saa3P04918 122 aa6.93□□□□□ -1.3
Clcn3-202ENSMUST00000056508 9530003J23RikQ8BM26 151 aa6.93□□□□□ -1.3
Clcn3-202ENSMUST00000056508 DccP70211 1447 aa6.93□□□□□ -1.3
Clcn3-202ENSMUST00000056508 P01663 111 aa6.93□□□□□ -1.3
Clcn3-202ENSMUST00000056508 PianpQ6P1B3 278 aa6.93□□□□□ -1.3
Clcn3-202ENSMUST00000056508 P01792 123 aa6.93□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Pbrm1Q8BSQ9 1634 aaKnown RBP6.93□□□□□ -1.3
Clcn3-202ENSMUST00000056508 PtprmP28828 1452 aa6.93□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Scn10aQ6QIY3 1958 aa6.93□□□□□ -1.3
Clcn3-202ENSMUST00000056508 Robo3Q9Z2I4 1366 aa6.93□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 63.3 ms