Protein–RNA interactions for Protein: Q30KP6

Defb41, Beta-defensin 41, mousemouse

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb41Q30KP6 Gm25239-201ENSMUST00000174915 86 ntBASIC35.23■■■■□ 3.23
Defb41Q30KP6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Defb41Q30KP6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Defb41Q30KP6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Defb41Q30KP6 Gm15042-201ENSMUST00000120212 883 ntBASIC31.05■■■□□ 2.56
Defb41Q30KP6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Defb41Q30KP6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
Defb41Q30KP6 Gm24109-201ENSMUST00000175489 103 ntBASIC30.39■■■□□ 2.46
Defb41Q30KP6 Gm15045-201ENSMUST00000117359 883 ntBASIC30.38■■■□□ 2.45
Defb41Q30KP6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Defb41Q30KP6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
Defb41Q30KP6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Defb41Q30KP6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Defb41Q30KP6 Gm23366-201ENSMUST00000175022 89 ntBASIC29.46■■■□□ 2.31
Defb41Q30KP6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Defb41Q30KP6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.23■■■□□ 2.27
Defb41Q30KP6 Psd-208ENSMUST00000224556 2034 ntBASIC29.12■■■□□ 2.25
Defb41Q30KP6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.22
Defb41Q30KP6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Defb41Q30KP6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Defb41Q30KP6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Defb41Q30KP6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Defb41Q30KP6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Defb41Q30KP6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.19
Defb41Q30KP6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
Defb41Q30KP6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Defb41Q30KP6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Defb41Q30KP6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.52■■■□□ 2.16
Defb41Q30KP6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.48■■■□□ 2.15
Defb41Q30KP6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Defb41Q30KP6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Defb41Q30KP6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.16■■■□□ 2.1
Defb41Q30KP6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.11■■■□□ 2.09
Defb41Q30KP6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Defb41Q30KP6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Defb41Q30KP6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.94■■■□□ 2.06
Defb41Q30KP6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Defb41Q30KP6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Defb41Q30KP6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Defb41Q30KP6 Gm25238-201ENSMUST00000174914 89 ntBASIC27.7■■■□□ 2.02
Defb41Q30KP6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.67■■■□□ 2.02
Defb41Q30KP6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.61■■■□□ 2.01
Defb41Q30KP6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Defb41Q30KP6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Defb41Q30KP6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Defb41Q30KP6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Defb41Q30KP6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.38■■□□□ 1.97
Defb41Q30KP6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Defb41Q30KP6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Defb41Q30KP6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Defb41Q30KP6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Defb41Q30KP6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Defb41Q30KP6 Gm27325-201ENSMUST00000175467 74 ntBASIC27.22■■□□□ 1.95
Defb41Q30KP6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.22■■□□□ 1.95
Defb41Q30KP6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Defb41Q30KP6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
Defb41Q30KP6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Defb41Q30KP6 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.08■■□□□ 1.93
Defb41Q30KP6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Defb41Q30KP6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.02■■□□□ 1.92
Defb41Q30KP6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Defb41Q30KP6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Defb41Q30KP6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Defb41Q30KP6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.9■■□□□ 1.9
Defb41Q30KP6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Defb41Q30KP6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Defb41Q30KP6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.88■■□□□ 1.89
Defb41Q30KP6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.85■■□□□ 1.89
Defb41Q30KP6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Defb41Q30KP6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
Defb41Q30KP6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Defb41Q30KP6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Defb41Q30KP6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.87
Defb41Q30KP6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.69■■□□□ 1.86
Defb41Q30KP6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Defb41Q30KP6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Defb41Q30KP6 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.6■■□□□ 1.85
Defb41Q30KP6 Rab21-202ENSMUST00000218831 843 ntBASIC26.58■■□□□ 1.85
Defb41Q30KP6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Defb41Q30KP6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Defb41Q30KP6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.52■■□□□ 1.84
Defb41Q30KP6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Defb41Q30KP6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.47■■□□□ 1.83
Defb41Q30KP6 Gm25262-201ENSMUST00000174934 133 ntBASIC26.42■■□□□ 1.82
Defb41Q30KP6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Defb41Q30KP6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Defb41Q30KP6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Defb41Q30KP6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Defb41Q30KP6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Defb41Q30KP6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Defb41Q30KP6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.23■■□□□ 1.79
Defb41Q30KP6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Defb41Q30KP6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.21■■□□□ 1.79
Defb41Q30KP6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Defb41Q30KP6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Defb41Q30KP6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Defb41Q30KP6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Defb41Q30KP6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Defb41Q30KP6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Defb41Q30KP6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 115.6 ms