RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Gm11110Q3U4K9 109 aa13.74□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Oosp2Q4FZG8 168 aa13.74□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Ang6Q5GAN0 147 aa13.74□□□□□ -0.21
Col17a1-201ENSMUST00000026045 LenepQ9WVB6 61 aa13.74□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Olfr364-ps1A0A140T8Q2 307 aa13.74□□□□□ -0.21
Col17a1-201ENSMUST00000026045 NracQ8BNX7 165 aa13.74□□□□□ -0.21
Col17a1-201ENSMUST00000026045 QrfpQ8CE23 124 aa13.74□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Scrt1Q99M85 348 aa13.74□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Wdr81Q5ND34 1934 aa13.74□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Tmem92B7ZWI3 162 aa13.74□□□□□ -0.21
Col17a1-201ENSMUST00000026045 CrygsO35486 178 aa13.74□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Cacna1eQ61290 2272 aa13.74□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Gtf3c1Q8K284 2101 aa13.74□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Abca7Q91V24 2159 aa13.74□□□□□ -0.21
Col17a1-201ENSMUST00000026045 P01759 136 aa13.74□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Tmem131O70472 1877 aa13.74□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Sod1P08228 154 aaKnown RBP13.73□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Srsf7Q8BL97 267 aaKnown RBP13.73□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Gm20379A0A087WR34 119 aa13.73□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Mzt1Q8BUR9 78 aa13.73□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Tomm40Q9QYA2 361 aa13.73□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Nhlrc1Q8BR37 401 aa13.73□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Tnrc6aQ3UHK8 1896 aaKnown RBP13.73□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Trav4-4-dv10A0A075B651 110 aa13.72□□□□□ -0.21
Col17a1-201ENSMUST00000026045 4930412O13RikQ9D5M9 106 aa13.72□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Igh-VJ558P01758 117 aa13.72□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Iglv3A0A0B4J1K5 122 aa13.72□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Tcrg-C3L7N479 172 aa13.72□□□□□ -0.21
Col17a1-201ENSMUST00000026045 P03985 172 aa13.72□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Runx1Q03347 451 aa13.72□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Cd99Q8VCN6 175 aa13.72□□□□□ -0.21
Col17a1-201ENSMUST00000026045 EppinQ9DA01 134 aa13.72□□□□□ -0.21
Col17a1-201ENSMUST00000026045 BB014433Q8C5R5 389 aa13.72□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Ighv6-7A0A0A6YWU3 119 aa13.71□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Olfr745Q7TRL9 328 aa13.71□□□□□ -0.21
Col17a1-201ENSMUST00000026045 C1qtnf5Q8K479 243 aa13.71□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Rasl11bQ922H7 247 aa13.71□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Mrps36Q9CQX8 102 aa13.71□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Gm11020F6ZGD5 61 aa13.71□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Prima1Q810F0 153 aa13.71□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Qrich2A0A140LIY9 2337 aa13.71□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Gm20726G3UX18 150 aa13.7□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Clec5aQ9R007 190 aa13.7□□□□□ -0.22
Col17a1-201ENSMUST00000026045 GhrhP16043 103 aa13.7□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Plxnd1Q3UH93 1925 aa13.7□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Trav6-6A0A075B603 114 aa13.7□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Heatr1G3X9B1 2143 aaKnown RBP13.7□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Q80X32 188 aaKnown RBP13.7□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Igkv14-126A0A075B5K0 117 aa13.69□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Iqcf6G3UWF2 157 aa13.69□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Gm28778A0A087WSK7 233 aa13.69□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Pom121l2Q5SW25 972 aa13.69□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Ros1Q78DX7 2340 aa13.69□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Rnase2bO35292 155 aa13.69□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Tmem52Q9D702 196 aa13.69□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Exph5Q0VAV2 1960 aa13.69□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Znf22Q9ERU3 237 aa13.69□□□□□ -0.22
Col17a1-201ENSMUST00000026045 P01783 136 aa13.69□□□□□ -0.22
Col17a1-201ENSMUST00000026045 P01811 117 aa13.69□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Gm10188Q3V432 135 aa13.69□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Eml5Q8BQM8 1977 aa13.68□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Igkv4-90A0A075B5L3 117 aa13.68□□□□□ -0.22
Col17a1-201ENSMUST00000026045 B230307C23RikQ8BLB2 64 aa13.68□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Q8VC23 124 aa13.68□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Mrpl53Q9D1H8 118 aaKnown RBP13.68□□□□□ -0.22
Col17a1-201ENSMUST00000026045 P18526 117 aa13.68□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Rpl32-psP17932 135 aa13.68□□□□□ -0.22
Col17a1-201ENSMUST00000026045 NdpP48744 131 aa13.68□□□□□ -0.22
Col17a1-201ENSMUST00000026045 MpdzQ8VBX6 2055 aa13.68□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Ttc9cQ810A3 171 aa13.68□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Q8C708 225 aa13.68□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Igkv4-51A0N8I8 119 aa13.67□□□□□ -0.22
Col17a1-201ENSMUST00000026045 SpinklQ8CEK3 90 aa13.67□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Gm6034E9Q101 117 aa13.67□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Cd5P13379 494 aa13.67□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Morn2Q6UL01 79 aa13.67□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Zc2hc1aQ8BJH1 324 aa13.67□□□□□ -0.22
Col17a1-201ENSMUST00000026045 PmvkQ9D1G2 192 aa13.67□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Adamts9E9PUN6 1931 aa13.67□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Ighv14-1A0A075B5R4 117 aa13.67□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Gm28539A0A087WSL9 92 aa13.67□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Slc25a16Q8C0K5 332 aa13.67□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Znf691Q3TDE8 283 aa13.66□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Wfdc2Q9DAU7 174 aa13.66□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Higd1aQ9JLR9 95 aa13.66□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Ighv9-3A0A0B4J1J5 117 aa13.66□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Il19Q8CJ70 176 aa13.66□□□□□ -0.22
Col17a1-201ENSMUST00000026045 PtprdQ64487 1912 aa13.66□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Gm21974F6W3F3 119 aa13.66□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Gm2174F6ZVF2 133 aa13.66□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Saa4P31532 130 aa13.66□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Sh2d6Q9D413 297 aa13.66□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Gm17732E9Q5I2 61 aa13.66□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Vdac2Q60930 295 aaKnown RBP13.66□□□□□ -0.22
Col17a1-201ENSMUST00000026045 ElaneQ3UP87 265 aa13.65□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Cryba4Q9JJV0 196 aa13.65□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Trav19A0A0B4J1K4 119 aa13.65□□□□□ -0.22
Col17a1-201ENSMUST00000026045 MalO09198 153 aa13.65□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Msrb3Q8BU85 253 aa13.65□□□□□ -0.22
Col17a1-201ENSMUST00000026045 Mrpl36Q99N90 102 aa13.65□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 46.1 ms