RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Rab9aQ9R0M6 201 aa14.77□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Hsbp1l1B2RXB2 72 aa14.76□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Scgb1b19F6WYW0 93 aa14.76□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Saa3P04918 122 aa14.76□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Ndufb3Q9CQZ6 104 aa14.76□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Vmn1r60G3UY47 300 aa14.76□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Olfr150Q60895 312 aa14.76□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Ifi27Q8C6G0 260 aa14.76□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Insig2Q91WG1 225 aa14.76□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Mrpl32Q9DCI9 187 aaKnown RBP14.76□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Vmn1r1E9PVR6 306 aa14.75□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Slc25a39Q9D8K8 359 aa14.75□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Klf13Q9JJZ6 289 aa14.75□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Gm21983D6RFS9 131 aa14.75□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 RbpjP31266 526 aa14.75□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 9130213A22RikQ3V3T2 120 aa14.75□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Olfr975Q8VG91 310 aa14.75□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Lyg1Q9D7Q0 197 aa14.75□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 GlrxQ9QUH0 107 aa14.75□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Ighv1-55A0A075B5W6 117 aa14.74□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Trdv1A0A075B657 112 aa14.74□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 eef1akmt3D3YWP0 232 aa14.74□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Fgfbp1O70514 251 aa14.74□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Plekhb2Q9QZC7 221 aa14.74□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Trank1Q8BV79 2999 aa14.74□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 CrebbpP45481 2441 aa14.74□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Zfp983E9PUT0 460 aa14.74□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Defa-rs1P17533 116 aa14.74□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Cdkn1aP39689 159 aa14.74□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 YrdcQ3U5F4 280 aa14.74□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Habp2Q8K0D2 558 aa14.74□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Trav9d-1A0A075B699 112 aa14.73□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Gm6871L7N248 545 aa14.73□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 F2rl1P55086 399 aa14.73□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Gm10188Q3V432 135 aa14.73□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Gm2174F6ZVF2 133 aa14.73□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Ubald2Q8BQH4 164 aa14.73□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Ighv1-37A0A0A6YW32 117 aa14.72□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Gm3512L7N206 146 aa14.72□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 BokO35425 213 aa14.72□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Myod1P10085 318 aa14.72□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Q497N7 227 aa14.72□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 GaptQ8CB93 157 aa14.72□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Vmn1r216Q8R257 298 aa14.72□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Olfr976Q8VF15 326 aa14.72□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Cend1Q9JKC6 149 aa14.72□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Tln1P26039 2541 aaKnown RBP14.72□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Shisal2aA2A9G7 189 aa14.71□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Plcxd2B2RXA1 340 aa14.71□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 CntfrO88507 372 aa14.71□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 P01793 123 aa14.71□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Arf6P62331 175 aa14.71□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Ccsmst1Q6RUT7 136 aa14.71□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 4930474N05RikQ8BVR5 218 aa14.71□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Lamtor2Q9JHS3 125 aa14.71□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Crybb3Q9JJU9 211 aa14.71□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Trav6-6A0A075B603 114 aa14.71□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Svs5P30933 122 aa14.71□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Bsph1Q3UW26 133 aa14.71□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Cox7a2lQ61387 111 aa14.71□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Stxbp6Q8R3T5 210 aa14.71□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 Rab1bQ9D1G1 201 aa14.71□□□□□ -0.05
Shkbp1-201ENSMUST00000003857 P01748 117 aa14.7□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Tmem95P0DJF3 176 aa14.7□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Cd5P13379 494 aa14.7□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Tmem241Q3UME2 297 aa14.7□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Slc25a16Q8C0K5 332 aa14.7□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Olfr1199Q8VF94 310 aa14.7□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Fxyd4Q9D2W0 88 aa14.7□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Olfr904Q7TRC9 310 aa14.7□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Tmem89Q9DA04 169 aa14.7□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Ighv7-4A0A0A6YXL5 121 aa14.69□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Med12A2AGH6 2190 aa14.69□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 LtaP09225 202 aa14.69□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Q24JP4 165 aa14.69□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Olfr761Q7TRJ0 323 aa14.69□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Nat8f4G5E8L3 226 aa14.69□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Pde6hP61249 83 aa14.69□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Rasl11aQ6IMB1 242 aa14.69□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Zc2hc1aQ8BJH1 324 aa14.69□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Olfr1243Q8VGM7 305 aa14.69□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Nat6Q9R123 314 aa14.69□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Sptbn2Q68FG2 2388 aa14.69□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Ighv1-31A0A0A6YWK5 117 aa14.68□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Olfr1185-ps1F6XP16 303 aa14.68□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Col8a1Q00780 744 aa14.68□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Ripply2Q2WG76 128 aa14.68□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Plrg1Q922V4 513 aaKnown RBP14.68□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Esp23A8R0V5 104 aa14.68□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Zfp92Q62396 488 aa14.68□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 GlmpQ9JHJ3 404 aa14.68□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 IcosQ9WVS0 200 aa14.68□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Amn1B8JKV0 258 aa14.67□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Ebi3O35228 228 aa14.67□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Gsx1P31315 261 aa14.67□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 NdpP48744 131 aa14.67□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Hes7Q8BKT2 225 aa14.67□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Cml3Q9JIY8 226 aa14.67□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Sub1P11031 127 aaKnown RBP14.67□□□□□ -0.06
Shkbp1-201ENSMUST00000003857 Olfr810Q8VFH9 312 aa14.67□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 50.8 ms