RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 UBR3Q6ZT12 1888 aa0.4□□□□□ -2.35
ECHDC1-219ENST00000526299 SPAG17Q6Q759 2223 aa0.4□□□□□ -2.35
ECHDC1-219ENST00000526299 EXPH5Q8NEV8 1989 aa0.4□□□□□ -2.35
ECHDC1-219ENST00000526299 RAPGEF6Q8TEU7 1601 aa0.4□□□□□ -2.35
ECHDC1-219ENST00000526299 CCDC180Q9P1Z9 1646 aa0.4□□□□□ -2.35
ECHDC1-219ENST00000526299 K7EQZ3 153 aa0.4□□□□□ -2.35
ECHDC1-219ENST00000526299 IAPPP10997 89 aa0.4□□□□□ -2.35
ECHDC1-219ENST00000526299 SPRR1BP22528 89 aa0.4□□□□□ -2.35
ECHDC1-219ENST00000526299 DEFB106AQ8N104 65 aa0.4□□□□□ -2.35
ECHDC1-219ENST00000526299 LRRC37A2A6NM11 1700 aa0.4□□□□□ -2.35
ECHDC1-219ENST00000526299 FMN2Q9NZ56 1722 aa0.4□□□□□ -2.35
ECHDC1-219ENST00000526299 MUC4Q99102 2169 aa0.4□□□□□ -2.35
ECHDC1-219ENST00000526299 LAMA4Q16363 1823 aa0.4□□□□□ -2.35
ECHDC1-219ENST00000526299 WNK3Q9BYP7 1800 aa0.4□□□□□ -2.35
ECHDC1-219ENST00000526299 CFAP74Q9C0B2 1584 aa0.4□□□□□ -2.35
ECHDC1-219ENST00000526299 PI4KAP42356 2102 aa0.4□□□□□ -2.35
ECHDC1-219ENST00000526299 MYOM1P52179 1685 aa0.4□□□□□ -2.35
ECHDC1-219ENST00000526299 ZNF142P52746 1687 aaPredicted RBP0.4□□□□□ -2.35
ECHDC1-219ENST00000526299 CASP8AP2Q9UKL3 1982 aa0.39□□□□□ -2.35
ECHDC1-219ENST00000526299 ABCC6O95255 1503 aa0.39□□□□□ -2.35
ECHDC1-219ENST00000526299 NESP48681 1621 aa0.39□□□□□ -2.35
ECHDC1-219ENST00000526299 DEFB131BA0A096LNP1 70 aa0.39□□□□□ -2.35
ECHDC1-219ENST00000526299 CRIP1P50238 77 aa0.39□□□□□ -2.35
ECHDC1-219ENST00000526299 SPINK6Q6UWN8 80 aa0.39□□□□□ -2.35
ECHDC1-219ENST00000526299 ABCA8O94911 1581 aa0.39□□□□□ -2.35
ECHDC1-219ENST00000526299 ARHGEF5Q12774 1597 aa0.39□□□□□ -2.35
ECHDC1-219ENST00000526299 CDC42BPGQ6DT37 1551 aa0.39□□□□□ -2.35
ECHDC1-219ENST00000526299 CEP170BQ9Y4F5 1589 aaPredicted RBP0.39□□□□□ -2.35
ECHDC1-219ENST00000526299 PREX1Q8TCU6 1659 aa0.39□□□□□ -2.35
ECHDC1-219ENST00000526299 KIAA0586Q9BVV6 1533 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 TMEM131LA2VDJ0 1609 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 TARBP1Q13395 1621 aaKnown RBP0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 ABCA9Q8IUA7 1624 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 PTPN23Q9H3S7 1636 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 XRN1Q8IZH2 1706 aaKnown RBP0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 MYH4Q9Y623 1939 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 TET1Q8NFU7 2136 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 BRWD1Q9NSI6 2320 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 NINQ8N4C6 2090 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 PPLO60437 1756 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 LTN1O94822 1766 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 LAMB1P07942 1786 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 RGPD2P0DJD1 1756 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 COL4A5P29400 1685 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 SSC5DA1L4H1 1573 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 PLXNC1O60486 1568 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 TIAM1Q13009 1591 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 A0A0D9SG42 100 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 H3BUA1 57 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 SPRR1AP35321 89 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 LELP1Q5T871 98 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 SMIM2Q9BVW6 85 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 PLAC8Q9NZF1 115 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 TNRC6BQ9UPQ9 1833 aaKnown RBP0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 NUP188Q5SRE5 1749 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 RICTORQ6R327 1708 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 PKD1L3Q7Z443 1732 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 CRYBG1Q9Y4K1 1723 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 PAPPAQ13219 1627 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 EFCAB6Q5THR3 1501 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 ABCA10Q8WWZ4 1543 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 TECTAO75443 2155 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 INTS1Q8N201 2190 aaKnown RBP0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 MED12Q93074 2177 aa0.38□□□□□ -2.35
ECHDC1-219ENST00000526299 COL4A1P02462 1669 aa0.37□□□□□ -2.35
ECHDC1-219ENST00000526299 SHPRHQ149N8 1683 aa0.37□□□□□ -2.35
ECHDC1-219ENST00000526299 PPRC1Q5VV67 1664 aaKnown RBP0.37□□□□□ -2.35
ECHDC1-219ENST00000526299 KIF20BQ96Q89 1820 aa0.37□□□□□ -2.35
ECHDC1-219ENST00000526299 I3L2K1 104 aa0.37□□□□□ -2.35
ECHDC1-219ENST00000526299 K7EIL1 84 aa0.37□□□□□ -2.35
ECHDC1-219ENST00000526299 DEFB130BP0DP73 79 aa0.37□□□□□ -2.35
ECHDC1-219ENST00000526299 DEFB130AP0DP74 79 aa0.37□□□□□ -2.35
ECHDC1-219ENST00000526299 KRTAP10-4P60372 401 aaPredicted RBP0.37□□□□□ -2.35
ECHDC1-219ENST00000526299 DEFB114Q30KQ6 69 aa0.37□□□□□ -2.35
ECHDC1-219ENST00000526299 COX6B2Q6YFQ2 88 aa0.37□□□□□ -2.35
ECHDC1-219ENST00000526299 KCNQ1DNQ9H478 68 aa0.37□□□□□ -2.35
ECHDC1-219ENST00000526299 A0A0G2JMZ2 1700 aa0.37□□□□□ -2.35
ECHDC1-219ENST00000526299 LAMC1P11047 1609 aa0.37□□□□□ -2.35
ECHDC1-219ENST00000526299 SHROOM2Q13796 1616 aa0.37□□□□□ -2.35
ECHDC1-219ENST00000526299 USP32Q8NFA0 1604 aa0.37□□□□□ -2.35
ECHDC1-219ENST00000526299 MYO7AQ13402 2215 aa0.37□□□□□ -2.35
ECHDC1-219ENST00000526299 RGPD8O14715 1765 aaPredicted RBP0.37□□□□□ -2.35
ECHDC1-219ENST00000526299 RGPD5Q99666 1765 aa0.37□□□□□ -2.35
ECHDC1-219ENST00000526299 NUMA1Q14980 2115 aa0.37□□□□□ -2.35
ECHDC1-219ENST00000526299 LRRC37AA6NMS7 1700 aa0.36□□□□□ -2.35
ECHDC1-219ENST00000526299 ITSN1Q15811 1721 aa0.36□□□□□ -2.35
ECHDC1-219ENST00000526299 TIAM2Q8IVF5 1701 aa0.36□□□□□ -2.35
ECHDC1-219ENST00000526299 ABCA6Q8N139 1617 aa0.36□□□□□ -2.35
ECHDC1-219ENST00000526299 EIF2AK4Q9P2K8 1649 aaKnown RBP0.36□□□□□ -2.35
ECHDC1-219ENST00000526299 IGIPA6NJ69 53 aa0.36□□□□□ -2.35
ECHDC1-219ENST00000526299 DEFB135Q30KP9 77 aa0.36□□□□□ -2.35
ECHDC1-219ENST00000526299 NOP10Q9NPE3 64 aaKnown RBP0.36□□□□□ -2.35
ECHDC1-219ENST00000526299 TOMM7Q9P0U1 55 aa0.36□□□□□ -2.35
ECHDC1-219ENST00000526299 SLIT1O75093 1534 aa0.36□□□□□ -2.35
ECHDC1-219ENST00000526299 AGLP35573 1532 aa0.36□□□□□ -2.35
ECHDC1-219ENST00000526299 CLASP1Q7Z460 1538 aa0.36□□□□□ -2.35
ECHDC1-219ENST00000526299 SYCP2Q9BX26 1530 aa0.36□□□□□ -2.35
ECHDC1-219ENST00000526299 COL14A1Q05707 1796 aaKnown RBP0.36□□□□□ -2.35
ECHDC1-219ENST00000526299 COL4A6Q14031 1691 aa0.36□□□□□ -2.35
ECHDC1-219ENST00000526299 DOCK11Q5JSL3 2073 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms