RNA–Protein interactions for RNA: ENST00000516584.1

RNU6-1004P-201, Transcript of RNA, U6 small nuclear 1004, pseudogene, humanhuman

BASIC

Gene RNU6-1004P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1004P-201ENST00000516584 KIF20BQ96Q89 1820 aa0.73□□□□□ -2.29
RNU6-1004P-201ENST00000516584 RGPD2P0DJD1 1756 aa0.73□□□□□ -2.29
RNU6-1004P-201ENST00000516584 RGPD1P0DJD0 1748 aa0.72□□□□□ -2.29
RNU6-1004P-201ENST00000516584 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
RNU6-1004P-201ENST00000516584 KRTAP5-10Q6L8G5 202 aa0.72□□□□□ -2.29
RNU6-1004P-201ENST00000516584 U3KQA8 63 aa0.72□□□□□ -2.29
RNU6-1004P-201ENST00000516584 USF3Q68DE3 2245 aa0.72□□□□□ -2.29
RNU6-1004P-201ENST00000516584 BDP1A6H8Y1 2624 aa0.71□□□□□ -2.3
RNU6-1004P-201ENST00000516584 APCP25054 2843 aa0.71□□□□□ -2.3
RNU6-1004P-201ENST00000516584 PLCE1Q9P212 2302 aa0.71□□□□□ -2.3
RNU6-1004P-201ENST00000516584 KLK9Q2XQG4 91 aa0.71□□□□□ -2.3
RNU6-1004P-201ENST00000516584 MRPL34Q9BQ48 92 aaKnown RBP0.71□□□□□ -2.3
RNU6-1004P-201ENST00000516584 USP24Q9UPU5 2620 aa0.71□□□□□ -2.3
RNU6-1004P-201ENST00000516584 POLQO75417 2590 aa0.71□□□□□ -2.3
RNU6-1004P-201ENST00000516584 RRBP1Q9P2E9 1410 aaKnown RBP0.71□□□□□ -2.3
RNU6-1004P-201ENST00000516584 TSC2P49815 1807 aa0.71□□□□□ -2.3
RNU6-1004P-201ENST00000516584 UBR4Q5T4S7 5183 aa0.7□□□□□ -2.3
RNU6-1004P-201ENST00000516584 TPRP12270 2363 aaKnown RBP0.7□□□□□ -2.3
RNU6-1004P-201ENST00000516584 CACNA1AO00555 2505 aa0.7□□□□□ -2.3
RNU6-1004P-201ENST00000516584 URB2Q14146 1524 aaKnown RBP0.69□□□□□ -2.3
RNU6-1004P-201ENST00000516584 PCLOQ9Y6V0 5065 aa0.69□□□□□ -2.3
RNU6-1004P-201ENST00000516584 NDUFB1O75438 58 aa0.69□□□□□ -2.3
RNU6-1004P-201ENST00000516584 SPTBN2O15020 2390 aa0.69□□□□□ -2.3
RNU6-1004P-201ENST00000516584 C2CD3Q4AC94 2353 aa0.69□□□□□ -2.3
RNU6-1004P-201ENST00000516584 NCOA2Q15596 1464 aa0.68□□□□□ -2.3
RNU6-1004P-201ENST00000516584 RPL38P63173 70 aaKnown RBP0.68□□□□□ -2.3
RNU6-1004P-201ENST00000516584 DEFB121Q5J5C9 76 aa0.68□□□□□ -2.3
RNU6-1004P-201ENST00000516584 PKD1L2Q7Z442 2459 aa0.68□□□□□ -2.3
RNU6-1004P-201ENST00000516584 CACNA1EQ15878 2313 aa0.67□□□□□ -2.3
RNU6-1004P-201ENST00000516584 CELSR2Q9HCU4 2923 aa0.67□□□□□ -2.3
RNU6-1004P-201ENST00000516584 F8P00451 2351 aa0.67□□□□□ -2.3
RNU6-1004P-201ENST00000516584 A0A087WXM4 84 aa0.67□□□□□ -2.3
RNU6-1004P-201ENST00000516584 USP32Q8NFA0 1604 aa0.67□□□□□ -2.3
RNU6-1004P-201ENST00000516584 AHNAKQ09666 5890 aaKnown RBP0.66□□□□□ -2.3
RNU6-1004P-201ENST00000516584 ABCC1P33527 1531 aa0.66□□□□□ -2.3
RNU6-1004P-201ENST00000516584 SPINK4O60575 86 aa0.66□□□□□ -2.3
RNU6-1004P-201ENST00000516584 ATP5EP2Q5VTU8 51 aa0.66□□□□□ -2.3
RNU6-1004P-201ENST00000516584 C18orf32Q8TCD1 76 aa0.66□□□□□ -2.3
RNU6-1004P-201ENST00000516584 UBR3Q6ZT12 1888 aa0.66□□□□□ -2.3
RNU6-1004P-201ENST00000516584 CLIP1P30622 1438 aa0.65□□□□□ -2.3
RNU6-1004P-201ENST00000516584 URB1O60287 2271 aaKnown RBP0.65□□□□□ -2.31
RNU6-1004P-201ENST00000516584 H1FX-AS1Q4G0G2 97 aa0.65□□□□□ -2.31
RNU6-1004P-201ENST00000516584 COL6A3P12111 3177 aa0.65□□□□□ -2.31
RNU6-1004P-201ENST00000516584 COL14A1Q05707 1796 aaKnown RBP0.65□□□□□ -2.31
RNU6-1004P-201ENST00000516584 PIK3C2BO00750 1634 aa0.64□□□□□ -2.31
RNU6-1004P-201ENST00000516584 QSER1Q2KHR3 1735 aa0.64□□□□□ -2.31
RNU6-1004P-201ENST00000516584 CCL22O00626 93 aa0.64□□□□□ -2.31
RNU6-1004P-201ENST00000516584 IFI6P09912 130 aa0.64□□□□□ -2.31
RNU6-1004P-201ENST00000516584 SMIM13P0DJ93 91 aa0.64□□□□□ -2.31
RNU6-1004P-201ENST00000516584 HEPN1Q6WQI6 88 aa0.64□□□□□ -2.31
RNU6-1004P-201ENST00000516584 ZNF831Q5JPB2 1677 aa0.64□□□□□ -2.31
RNU6-1004P-201ENST00000516584 UMAD1C9J7I0 102 aa0.63□□□□□ -2.31
RNU6-1004P-201ENST00000516584 DOPEY2Q9Y3R5 2298 aa0.63□□□□□ -2.31
RNU6-1004P-201ENST00000516584 ANKARQ7Z5J8 1434 aa0.63□□□□□ -2.31
RNU6-1004P-201ENST00000516584 ANK2Q01484 3957 aa0.63□□□□□ -2.31
RNU6-1004P-201ENST00000516584 CFAP74Q9C0B2 1584 aa0.62□□□□□ -2.31
RNU6-1004P-201ENST00000516584 PIEZO1Q92508 2521 aa0.62□□□□□ -2.31
RNU6-1004P-201ENST00000516584 BPTFQ12830 3046 aa0.62□□□□□ -2.31
RNU6-1004P-201ENST00000516584 KIAA1109Q2LD37 5005 aa0.62□□□□□ -2.31
RNU6-1004P-201ENST00000516584 CEP170BQ9Y4F5 1589 aaPredicted RBP0.62□□□□□ -2.31
RNU6-1004P-201ENST00000516584 ANKRD17O75179 2603 aaKnown RBP0.61□□□□□ -2.31
RNU6-1004P-201ENST00000516584 LELP1Q5T871 98 aa0.61□□□□□ -2.31
RNU6-1004P-201ENST00000516584 MACF1Q9UPN3 7388 aaKnown RBP0.6□□□□□ -2.31
RNU6-1004P-201ENST00000516584 IFI27P40305 119 aaPredicted RBP0.6□□□□□ -2.31
RNU6-1004P-201ENST00000516584 POLR1AO95602 1720 aaPredicted RBP0.6□□□□□ -2.31
RNU6-1004P-201ENST00000516584 TRANK1O15050 2925 aa0.6□□□□□ -2.31
RNU6-1004P-201ENST00000516584 LTN1O94822 1766 aa0.6□□□□□ -2.31
RNU6-1004P-201ENST00000516584 PTPRQQ9UMZ3 2332 aa0.59□□□□□ -2.31
RNU6-1004P-201ENST00000516584 MUC2Q02817 5179 aa0.59□□□□□ -2.32
RNU6-1004P-201ENST00000516584 MAP3K1Q13233 1512 aa0.59□□□□□ -2.32
RNU6-1004P-201ENST00000516584 MUC5BQ9HC84 5762 aaPredicted RBP0.59□□□□□ -2.32
RNU6-1004P-201ENST00000516584 BCORQ6W2J9 1755 aa0.58□□□□□ -2.32
RNU6-1004P-201ENST00000516584 SYNE2Q8WXH0 6885 aaKnown RBP0.58□□□□□ -2.32
RNU6-1004P-201ENST00000516584 NREPQ16612 68 aa0.58□□□□□ -2.32
RNU6-1004P-201ENST00000516584 RYR1P21817 5038 aa0.57□□□□□ -2.32
RNU6-1004P-201ENST00000516584 CDKN2A-AS1Q9UH64 79 aa0.57□□□□□ -2.32
RNU6-1004P-201ENST00000516584 MAGI3Q5TCQ9 1506 aa0.57□□□□□ -2.32
RNU6-1004P-201ENST00000516584 AHNAK2Q8IVF2 5795 aa0.57□□□□□ -2.32
RNU6-1004P-201ENST00000516584 PREX1Q8TCU6 1659 aa0.56□□□□□ -2.32
RNU6-1004P-201ENST00000516584 DOT1LQ8TEK3 1739 aa0.56□□□□□ -2.32
RNU6-1004P-201ENST00000516584 PTPRZ1P23471 2315 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1004P-201ENST00000516584 ZNF292O60281 2723 aa0.56□□□□□ -2.32
RNU6-1004P-201ENST00000516584 CHD9Q3L8U1 2897 aa0.55□□□□□ -2.32
RNU6-1004P-201ENST00000516584 ABCA8O94911 1581 aa0.55□□□□□ -2.32
RNU6-1004P-201ENST00000516584 PTPN23Q9H3S7 1636 aa0.55□□□□□ -2.32
RNU6-1004P-201ENST00000516584 NEBP20929 6669 aa0.54□□□□□ -2.32
RNU6-1004P-201ENST00000516584 LOC730098B7Z3J9 87 aa0.54□□□□□ -2.32
RNU6-1004P-201ENST00000516584 SMCO4Q9NRQ5 59 aa0.54□□□□□ -2.32
RNU6-1004P-201ENST00000516584 TENM3Q9P273 2699 aa0.54□□□□□ -2.32
RNU6-1004P-201ENST00000516584 KMT2CQ8NEZ4 4911 aaKnown RBP0.54□□□□□ -2.32
RNU6-1004P-201ENST00000516584 PKDREJQ9NTG1 2253 aa0.54□□□□□ -2.32
RNU6-1004P-201ENST00000516584 STAB1Q9NY15 2570 aa0.53□□□□□ -2.32
RNU6-1004P-201ENST00000516584 CSMD3Q7Z407 3707 aa0.53□□□□□ -2.32
RNU6-1004P-201ENST00000516584 NDUFA3O95167 84 aa0.53□□□□□ -2.32
RNU6-1004P-201ENST00000516584 WFDC13Q8IUB5 93 aa0.53□□□□□ -2.32
RNU6-1004P-201ENST00000516584 PIEZO2Q9H5I5 2752 aa0.53□□□□□ -2.32
RNU6-1004P-201ENST00000516584 SRCAPQ6ZRS2 3230 aa0.53□□□□□ -2.33
RNU6-1004P-201ENST00000516584 ARFGEF2Q9Y6D5 1785 aa0.52□□□□□ -2.33
RNU6-1004P-201ENST00000516584 FSIP2Q5CZC0 6907 aa0.52□□□□□ -2.33
RNU6-1004P-201ENST00000516584 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms