RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 ARL17AQ8IVW1 177 aa3.28□□□□□ -1.88
NEDD4-203ENST00000502612 WFDC10AQ9H1F0 79 aa3.28□□□□□ -1.88
NEDD4-203ENST00000502612 FLNCQ14315 2725 aa3.28□□□□□ -1.88
NEDD4-203ENST00000502612 SPTAN1Q13813 2472 aaKnown RBP3.27□□□□□ -1.89
NEDD4-203ENST00000502612 TRAV13-1A0A0B4J241 112 aa3.27□□□□□ -1.89
NEDD4-203ENST00000502612 K7ERJ3 54 aa3.27□□□□□ -1.89
NEDD4-203ENST00000502612 SPINK8P0C7L1 97 aa3.27□□□□□ -1.89
NEDD4-203ENST00000502612 TSPEAR-AS2P59090 65 aa3.27□□□□□ -1.89
NEDD4-203ENST00000502612 OCIAD2Q56VL3 154 aa3.27□□□□□ -1.89
NEDD4-203ENST00000502612 MEIG1Q5JSS6 88 aa3.27□□□□□ -1.89
NEDD4-203ENST00000502612 MUSTN1Q8IVN3 82 aa3.27□□□□□ -1.89
NEDD4-203ENST00000502612 CDKN2A-AS1Q9UH64 79 aa3.27□□□□□ -1.89
NEDD4-203ENST00000502612 TACC2O95359 2948 aa3.27□□□□□ -1.89
NEDD4-203ENST00000502612 FBN2P35556 2912 aa3.27□□□□□ -1.89
NEDD4-203ENST00000502612 LRRK2Q5S007 2527 aa3.27□□□□□ -1.89
NEDD4-203ENST00000502612 MUC4Q99102 2169 aa3.27□□□□□ -1.89
NEDD4-203ENST00000502612 CREBBPQ92793 2442 aa3.27□□□□□ -1.89
NEDD4-203ENST00000502612 SPG11Q96JI7 2443 aa3.27□□□□□ -1.89
NEDD4-203ENST00000502612 USP9YO00507 2555 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-203ENST00000502612 TRAV8-3A0A0A6YYJ7 113 aa3.26□□□□□ -1.89
NEDD4-203ENST00000502612 TRAV8-4A0A0B4J246 113 aa3.26□□□□□ -1.89
NEDD4-203ENST00000502612 TMEM262E9PQX1 116 aa3.26□□□□□ -1.89
NEDD4-203ENST00000502612 M0QXV9 152 aa3.26□□□□□ -1.89
NEDD4-203ENST00000502612 LINC00694P0DN24 101 aa3.26□□□□□ -1.89
NEDD4-203ENST00000502612 ATXN8Q156A1 80 aa3.26□□□□□ -1.89
NEDD4-203ENST00000502612 C3orf56Q8N813 242 aa3.26□□□□□ -1.89
NEDD4-203ENST00000502612 VPS25Q9BRG1 176 aa3.26□□□□□ -1.89
NEDD4-203ENST00000502612 SND1-IT1Q9HBX3 110 aa3.26□□□□□ -1.89
NEDD4-203ENST00000502612 ICOSQ9Y6W8 199 aa3.26□□□□□ -1.89
NEDD4-203ENST00000502612 HELZ2Q9BYK8 2649 aaKnown RBP3.26□□□□□ -1.89
NEDD4-203ENST00000502612 COL12A1Q99715 3063 aa3.26□□□□□ -1.89
NEDD4-203ENST00000502612 GCN1Q92616 2671 aaKnown RBP3.25□□□□□ -1.89
NEDD4-203ENST00000502612 TRAV13-2A0A0B4J235 113 aa3.25□□□□□ -1.89
NEDD4-203ENST00000502612 TRBV30A0A0K0K1B3 111 aa3.25□□□□□ -1.89
NEDD4-203ENST00000502612 H3BMG7 143 aa3.25□□□□□ -1.89
NEDD4-203ENST00000502612 H3BNG1 76 aa3.25□□□□□ -1.89
NEDD4-203ENST00000502612 DEFB135Q30KP9 77 aa3.25□□□□□ -1.89
NEDD4-203ENST00000502612 MUC7Q8TAX7 377 aa3.25□□□□□ -1.89
NEDD4-203ENST00000502612 COX7B2Q8TF08 81 aa3.25□□□□□ -1.89
NEDD4-203ENST00000502612 NAA38Q9BRA0 125 aaKnown RBP3.25□□□□□ -1.89
NEDD4-203ENST00000502612 FLNBO75369 2602 aaKnown RBP3.25□□□□□ -1.89
NEDD4-203ENST00000502612 PTPN13Q12923 2485 aa3.24□□□□□ -1.89
NEDD4-203ENST00000502612 LINC00959A0A1B0GUT2 108 aa3.24□□□□□ -1.89
NEDD4-203ENST00000502612 IBA57-AS1B1ANH7 110 aa3.24□□□□□ -1.89
NEDD4-203ENST00000502612 F5H768 121 aa3.24□□□□□ -1.89
NEDD4-203ENST00000502612 IGHV3-33P01772 117 aa3.24□□□□□ -1.89
NEDD4-203ENST00000502612 KRTAP5-9P26371 169 aa3.24□□□□□ -1.89
NEDD4-203ENST00000502612 COX6A2Q02221 97 aa3.24□□□□□ -1.89
NEDD4-203ENST00000502612 LELP1Q5T871 98 aa3.24□□□□□ -1.89
NEDD4-203ENST00000502612 LINC00308Q8TCZ7 52 aa3.24□□□□□ -1.89
NEDD4-203ENST00000502612 UTP20O75691 2785 aaKnown RBP3.24□□□□□ -1.89
NEDD4-203ENST00000502612 HECTD1Q9ULT8 2610 aa3.23□□□□□ -1.89
NEDD4-203ENST00000502612 SNCGO76070 127 aa3.23□□□□□ -1.89
NEDD4-203ENST00000502612 CKS1BP61024 79 aa3.23□□□□□ -1.89
NEDD4-203ENST00000502612 COX17Q14061 63 aa3.23□□□□□ -1.89
NEDD4-203ENST00000502612 CSPG4Q6UVK1 2322 aa3.23□□□□□ -1.89
NEDD4-203ENST00000502612 Q8IZM0 81 aa3.23□□□□□ -1.89
NEDD4-203ENST00000502612 Q8NAQ8 132 aa3.23□□□□□ -1.89
NEDD4-203ENST00000502612 ZNF625Q96I27 306 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-203ENST00000502612 TOMM7Q9P0U1 55 aa3.23□□□□□ -1.89
NEDD4-203ENST00000502612 APCP25054 2843 aa3.23□□□□□ -1.89
NEDD4-203ENST00000502612 IGKV3OR2-268A0A0C4DH90 116 aa3.22□□□□□ -1.89
NEDD4-203ENST00000502612 H3BT86 120 aa3.22□□□□□ -1.89
NEDD4-203ENST00000502612 H7C2G1 150 aa3.22□□□□□ -1.89
NEDD4-203ENST00000502612 COX7A2LO14548 114 aa3.22□□□□□ -1.89
NEDD4-203ENST00000502612 NDUFS5O43920 106 aa3.22□□□□□ -1.89
NEDD4-203ENST00000502612 CRPP02741 224 aa3.22□□□□□ -1.89
NEDD4-203ENST00000502612 ANGP03950 147 aaKnown RBP3.22□□□□□ -1.89
NEDD4-203ENST00000502612 LINC00158P58513 81 aa3.22□□□□□ -1.89
NEDD4-203ENST00000502612 SPINT4Q6UDR6 99 aa3.22□□□□□ -1.89
NEDD4-203ENST00000502612 TEN1Q86WV5 123 aa3.22□□□□□ -1.89
NEDD4-203ENST00000502612 PPDPFLQ8WWR9 84 aa3.22□□□□□ -1.89
NEDD4-203ENST00000502612 C11orf68Q9H3H3 251 aaKnown RBP3.22□□□□□ -1.89
NEDD4-203ENST00000502612 POLQO75417 2590 aa3.22□□□□□ -1.89
NEDD4-203ENST00000502612 ITPR3Q14573 2671 aa3.22□□□□□ -1.89
NEDD4-203ENST00000502612 SVEP1Q4LDE5 3571 aa3.21□□□□□ -1.9
NEDD4-203ENST00000502612 HIVEP2P31629 2446 aa3.21□□□□□ -1.9
NEDD4-203ENST00000502612 TRBV10-2A0A0K0K1G8 114 aa3.21□□□□□ -1.9
NEDD4-203ENST00000502612 FAM240AA0A1B0GVK7 77 aa3.21□□□□□ -1.9
NEDD4-203ENST00000502612 H0YGX0 51 aa3.21□□□□□ -1.9
NEDD4-203ENST00000502612 SLC25A20O43772 301 aa3.21□□□□□ -1.9
NEDD4-203ENST00000502612 TCL1BO95988 128 aa3.21□□□□□ -1.9
NEDD4-203ENST00000502612 XCL1P47992 114 aa3.21□□□□□ -1.9
NEDD4-203ENST00000502612 WFDC2Q14508 124 aa3.21□□□□□ -1.9
NEDD4-203ENST00000502612 CARD19Q96LW7 228 aa3.21□□□□□ -1.9
NEDD4-203ENST00000502612 LINC01600Q96MT4 127 aa3.21□□□□□ -1.9
NEDD4-203ENST00000502612 NOTCH2Q04721 2471 aa3.21□□□□□ -1.9
NEDD4-203ENST00000502612 PDZD2O15018 2839 aa3.21□□□□□ -1.9
NEDD4-203ENST00000502612 ABCA12Q86UK0 2595 aa3.2□□□□□ -1.9
NEDD4-203ENST00000502612 TENM4Q6N022 2769 aa3.2□□□□□ -1.9
NEDD4-203ENST00000502612 C9JAW5 83 aa3.2□□□□□ -1.9
NEDD4-203ENST00000502612 HTN3P15516 51 aa3.2□□□□□ -1.9
NEDD4-203ENST00000502612 NPC2P61916 151 aa3.2□□□□□ -1.9
NEDD4-203ENST00000502612 ETDBQ3ZM63 59 aa3.2□□□□□ -1.9
NEDD4-203ENST00000502612 C5orf38Q86SI9 138 aa3.2□□□□□ -1.9
NEDD4-203ENST00000502612 LINC00269Q8N2A0 174 aa3.2□□□□□ -1.9
NEDD4-203ENST00000502612 ANKRD29Q8N6D5 301 aa3.2□□□□□ -1.9
NEDD4-203ENST00000502612 LINC00337Q8N6G1 96 aa3.2□□□□□ -1.9
NEDD4-203ENST00000502612 V9GYY9 64 aa3.2□□□□□ -1.9
NEDD4-203ENST00000502612 CELSR1Q9NYQ6 3014 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms