RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 CYB5AP00167 134 aa0.25□□□□□ -2.37
XRN1-213ENST00000489241 KLK9Q2XQG4 91 aa0.25□□□□□ -2.37
XRN1-213ENST00000489241 DEFB112Q30KQ8 113 aa0.25□□□□□ -2.37
XRN1-213ENST00000489241 HRNRQ86YZ3 2850 aaPredicted RBP0.25□□□□□ -2.37
XRN1-213ENST00000489241 GVINP1Q7Z2Y8 2422 aa0.25□□□□□ -2.37
XRN1-213ENST00000489241 CELSR1Q9NYQ6 3014 aa0.24□□□□□ -2.37
XRN1-213ENST00000489241 LRRC37AA6NMS7 1700 aa0.24□□□□□ -2.37
XRN1-213ENST00000489241 MYO3AQ8NEV4 1616 aa0.24□□□□□ -2.37
XRN1-213ENST00000489241 VWFP04275 2813 aa0.23□□□□□ -2.37
XRN1-213ENST00000489241 SPTY2D1-AS1A0A0U1RR47 76 aa0.23□□□□□ -2.37
XRN1-213ENST00000489241 NMSQ5H8A3 153 aa0.23□□□□□ -2.37
XRN1-213ENST00000489241 UBE2D4Q9Y2X8 147 aa0.23□□□□□ -2.37
XRN1-213ENST00000489241 SAMD9Q5K651 1589 aa0.23□□□□□ -2.37
XRN1-213ENST00000489241 SLIT1O75093 1534 aa0.23□□□□□ -2.37
XRN1-213ENST00000489241 IQSEC2Q5JU85 1478 aa0.22□□□□□ -2.37
XRN1-213ENST00000489241 PLIN4Q96Q06 1357 aa0.22□□□□□ -2.37
XRN1-213ENST00000489241 ABCA2Q9BZC7 2435 aa0.22□□□□□ -2.37
XRN1-213ENST00000489241 IQCF6A8MYZ5 107 aa0.22□□□□□ -2.37
XRN1-213ENST00000489241 PLGLAQ15195 96 aa0.22□□□□□ -2.37
XRN1-213ENST00000489241 C9orf62Q8N4C0 152 aa0.22□□□□□ -2.37
XRN1-213ENST00000489241 CEP162Q5TB80 1403 aa0.21□□□□□ -2.38
XRN1-213ENST00000489241 LOC730098B7Z3J9 87 aa0.21□□□□□ -2.38
XRN1-213ENST00000489241 NEXMIFQ5QGS0 1516 aa0.21□□□□□ -2.38
XRN1-213ENST00000489241 PPLO60437 1756 aa0.21□□□□□ -2.38
XRN1-213ENST00000489241 ABCC3O15438 1527 aa0.2□□□□□ -2.38
XRN1-213ENST00000489241 A0A1B0GUT8 65 aa0.2□□□□□ -2.38
XRN1-213ENST00000489241 SNRPFP62306 86 aaKnown RBP0.2□□□□□ -2.38
XRN1-213ENST00000489241 DMBT1Q9UGM3 2413 aaPredicted RBP0.2□□□□□ -2.38
XRN1-213ENST00000489241 CHD6Q8TD26 2715 aa0.2□□□□□ -2.38
XRN1-213ENST00000489241 RGPD2P0DJD1 1756 aa0.19□□□□□ -2.38
XRN1-213ENST00000489241 SUPT6HQ7KZ85 1726 aaKnown RBP0.19□□□□□ -2.38
XRN1-213ENST00000489241 NKTRP30414 1462 aaKnown RBP0.19□□□□□ -2.38
XRN1-213ENST00000489241 MYMXA0A1B0GTQ4 84 aa0.19□□□□□ -2.38
XRN1-213ENST00000489241 MRPL34Q9BQ48 92 aaKnown RBP0.19□□□□□ -2.38
XRN1-213ENST00000489241 RABAC1Q9UI14 185 aa0.19□□□□□ -2.38
XRN1-213ENST00000489241 TENM4Q6N022 2769 aa0.19□□□□□ -2.38
XRN1-213ENST00000489241 PKD1L1Q8TDX9 2849 aa0.19□□□□□ -2.38
XRN1-213ENST00000489241 PTPN13Q12923 2485 aa0.18□□□□□ -2.38
XRN1-213ENST00000489241 HEPN1Q6WQI6 88 aa0.18□□□□□ -2.38
XRN1-213ENST00000489241 LINC00643Q86TS7 51 aa0.18□□□□□ -2.38
XRN1-213ENST00000489241 BCORQ6W2J9 1755 aa0.18□□□□□ -2.38
XRN1-213ENST00000489241 COX7BP24311 80 aa0.17□□□□□ -2.38
XRN1-213ENST00000489241 TDRG1Q3Y452 100 aa0.17□□□□□ -2.38
XRN1-213ENST00000489241 H1FX-AS1Q4G0G2 97 aa0.17□□□□□ -2.38
XRN1-213ENST00000489241 GAFA1Q96PS6 74 aa0.17□□□□□ -2.38
XRN1-213ENST00000489241 SPTA1P02549 2419 aa0.17□□□□□ -2.38
XRN1-213ENST00000489241 ALKQ9UM73 1620 aa0.16□□□□□ -2.38
XRN1-213ENST00000489241 UACAQ9BZF9 1416 aa0.16□□□□□ -2.38
XRN1-213ENST00000489241 KANTRA0A1W2PQU2 76 aa0.16□□□□□ -2.38
XRN1-213ENST00000489241 CEBPZOSA8MTT3 80 aa0.16□□□□□ -2.38
XRN1-213ENST00000489241 ACYP1P07311 99 aa0.16□□□□□ -2.38
XRN1-213ENST00000489241 KIF14Q15058 1648 aa0.16□□□□□ -2.38
XRN1-213ENST00000489241 CACNA1AO00555 2505 aa0.16□□□□□ -2.38
XRN1-213ENST00000489241 RGPD1P0DJD0 1748 aa0.16□□□□□ -2.38
XRN1-213ENST00000489241 QSER1Q2KHR3 1735 aa0.16□□□□□ -2.38
XRN1-213ENST00000489241 COL7A1Q02388 2944 aa0.15□□□□□ -2.39
XRN1-213ENST00000489241 LRRC7Q96NW7 1537 aa0.15□□□□□ -2.39
XRN1-213ENST00000489241 CCL22O00626 93 aa0.15□□□□□ -2.39
XRN1-213ENST00000489241 PRM1P04553 51 aa0.15□□□□□ -2.39
XRN1-213ENST00000489241 WFDC9Q8NEX5 89 aa0.15□□□□□ -2.39
XRN1-213ENST00000489241 ATP7BP35670 1465 aa0.15□□□□□ -2.39
XRN1-213ENST00000489241 ATRQ13535 2644 aa0.15□□□□□ -2.39
XRN1-213ENST00000489241 CLIP1P30622 1438 aa0.14□□□□□ -2.39
XRN1-213ENST00000489241 RPL38P63173 70 aaKnown RBP0.14□□□□□ -2.39
XRN1-213ENST00000489241 SPRR2GQ9BYE4 73 aa0.14□□□□□ -2.39
XRN1-213ENST00000489241 RB1CC1Q8TDY2 1594 aa0.14□□□□□ -2.39
XRN1-213ENST00000489241 TRAV21A0A0B4J279 112 aa0.13□□□□□ -2.39
XRN1-213ENST00000489241 S100A13Q99584 98 aa0.13□□□□□ -2.39
XRN1-213ENST00000489241 CDKN2A-AS1Q9UH64 79 aa0.13□□□□□ -2.39
XRN1-213ENST00000489241 MAGI2Q86UL8 1455 aa0.13□□□□□ -2.39
XRN1-213ENST00000489241 LTN1O94822 1766 aa0.13□□□□□ -2.39
XRN1-213ENST00000489241 GPR98Q8WXG9 6306 aa0.13□□□□□ -2.39
XRN1-213ENST00000489241 TMEM131LA2VDJ0 1609 aa0.13□□□□□ -2.39
XRN1-213ENST00000489241 MAP3K4Q9Y6R4 1608 aa0.13□□□□□ -2.39
XRN1-213ENST00000489241 WNK1Q9H4A3 2382 aa0.12□□□□□ -2.39
XRN1-213ENST00000489241 ADIRFQ15847 76 aa0.12□□□□□ -2.39
XRN1-213ENST00000489241 MAP1BP46821 2468 aaKnown RBP0.11□□□□□ -2.39
XRN1-213ENST00000489241 LELP1Q5T871 98 aa0.11□□□□□ -2.39
XRN1-213ENST00000489241 ST20Q9HBF5 79 aa0.11□□□□□ -2.39
XRN1-213ENST00000489241 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.11□□□□□ -2.39
XRN1-213ENST00000489241 HUWE1Q7Z6Z7 4374 aaKnown RBP0.1□□□□□ -2.39
XRN1-213ENST00000489241 BSNQ9UPA5 3926 aa0.1□□□□□ -2.39
XRN1-213ENST00000489241 CHD8Q9HCK8 2581 aa0.1□□□□□ -2.39
XRN1-213ENST00000489241 CCDC18Q5T9S5 1454 aa0.1□□□□□ -2.39
XRN1-213ENST00000489241 LRRC9Q6ZRR7 1453 aa0.1□□□□□ -2.39
XRN1-213ENST00000489241 M0R2T5 61 aa0.09□□□□□ -2.4
XRN1-213ENST00000489241 NDUFB1O75438 58 aa0.09□□□□□ -2.4
XRN1-213ENST00000489241 WFDC13Q8IUB5 93 aa0.09□□□□□ -2.4
XRN1-213ENST00000489241 FAT2Q9NYQ8 4349 aa0.09□□□□□ -2.4
XRN1-213ENST00000489241 MYCBP2O75592 4640 aa0.09□□□□□ -2.4
XRN1-213ENST00000489241 POLR1AO95602 1720 aaPredicted RBP0.08□□□□□ -2.4
XRN1-213ENST00000489241 SPRR2DP22532 72 aa0.08□□□□□ -2.4
XRN1-213ENST00000489241 RGPD8O14715 1765 aaPredicted RBP0.08□□□□□ -2.4
XRN1-213ENST00000489241 RGPD5Q99666 1765 aa0.08□□□□□ -2.4
XRN1-213ENST00000489241 MED14O60244 1454 aa0.08□□□□□ -2.4
XRN1-213ENST00000489241 APC2O95996 2303 aa0.08□□□□□ -2.4
XRN1-213ENST00000489241 PREX1Q8TCU6 1659 aa0.08□□□□□ -2.4
XRN1-213ENST00000489241 TIAM2Q8IVF5 1701 aa0.07□□□□□ -2.4
XRN1-213ENST00000489241 SYNE2Q8WXH0 6885 aaKnown RBP0.07□□□□□ -2.4
XRN1-213ENST00000489241 DCHS2Q6V1P9 2916 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms