RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 SBSPONQ8IVN8 264 aa8.38□□□□□ -1.07
RAPGEF3-210ENST00000482843 IGLV5-45A0A087WSX0 123 aa8.37□□□□□ -1.07
RAPGEF3-210ENST00000482843 TRBV30A0A0K0K1B3 111 aa8.37□□□□□ -1.07
RAPGEF3-210ENST00000482843 LINC00959A0A1B0GUT2 108 aa8.37□□□□□ -1.07
RAPGEF3-210ENST00000482843 PRR15Q8IV56 129 aa8.37□□□□□ -1.07
RAPGEF3-210ENST00000482843 TRRAPQ9Y4A5 3859 aa8.36□□□□□ -1.07
RAPGEF3-210ENST00000482843 RPL18AQ02543 176 aaKnown RBP8.36□□□□□ -1.07
RAPGEF3-210ENST00000482843 Q9HAA7 133 aa8.36□□□□□ -1.07
RAPGEF3-210ENST00000482843 CELA1Q9UNI1 258 aa8.36□□□□□ -1.07
RAPGEF3-210ENST00000482843 TMEM256-PLSCR3K7ERE1 68 aa8.36□□□□□ -1.07
RAPGEF3-210ENST00000482843 ANK3Q12955 4377 aaKnown RBP8.35□□□□□ -1.07
RAPGEF3-210ENST00000482843 TRBV10-2A0A0K0K1G8 114 aa8.35□□□□□ -1.07
RAPGEF3-210ENST00000482843 IGHV4-30-4P0DP06 118 aa8.35□□□□□ -1.07
RAPGEF3-210ENST00000482843 LINC00643Q86TS7 51 aa8.35□□□□□ -1.07
RAPGEF3-210ENST00000482843 DNAL4O96015 105 aa8.34□□□□□ -1.07
RAPGEF3-210ENST00000482843 KLK12Q9UKR0 248 aa8.34□□□□□ -1.07
RAPGEF3-210ENST00000482843 MGAM2Q2M2H8 2515 aa8.34□□□□□ -1.07
RAPGEF3-210ENST00000482843 A0A087WZ39 114 aa8.34□□□□□ -1.07
RAPGEF3-210ENST00000482843 H7C423 109 aa8.34□□□□□ -1.07
RAPGEF3-210ENST00000482843 SPART-AS1P0CW21 52 aa8.34□□□□□ -1.07
RAPGEF3-210ENST00000482843 CXCL5P42830 114 aa8.34□□□□□ -1.07
RAPGEF3-210ENST00000482843 IGHV3OR16-9A0A0B4J2B5 98 aa8.33□□□□□ -1.08
RAPGEF3-210ENST00000482843 TRBV7-6A0A0J9YX20 115 aa8.33□□□□□ -1.08
RAPGEF3-210ENST00000482843 SDIM1Q6ZPB5 146 aa8.33□□□□□ -1.08
RAPGEF3-210ENST00000482843 UPK3BQ9BT76 320 aa8.33□□□□□ -1.08
RAPGEF3-210ENST00000482843 PRR3P79522 188 aaKnown RBP8.33□□□□□ -1.08
RAPGEF3-210ENST00000482843 C9orf116Q5BN46 136 aaPredicted RBP8.32□□□□□ -1.08
RAPGEF3-210ENST00000482843 KTN1-AS1Q86SY8 53 aa8.32□□□□□ -1.08
RAPGEF3-210ENST00000482843 REG3AQ06141 175 aa8.32□□□□□ -1.08
RAPGEF3-210ENST00000482843 FBN1P35555 2871 aaKnown RBP8.32□□□□□ -1.08
RAPGEF3-210ENST00000482843 A0A087WVE0 104 aa8.31□□□□□ -1.08
RAPGEF3-210ENST00000482843 IGKV3D-7A0A0C4DH55 119 aa8.31□□□□□ -1.08
RAPGEF3-210ENST00000482843 LYRM9A8MSI8 78 aa8.31□□□□□ -1.08
RAPGEF3-210ENST00000482843 CHCHD10Q8WYQ3 142 aaPredicted RBP8.31□□□□□ -1.08
RAPGEF3-210ENST00000482843 COX7A2LO14548 114 aa8.31□□□□□ -1.08
RAPGEF3-210ENST00000482843 CCL18P55774 89 aa8.31□□□□□ -1.08
RAPGEF3-210ENST00000482843 LST1O00453 97 aa8.31□□□□□ -1.08
RAPGEF3-210ENST00000482843 CCKP06307 115 aa8.3□□□□□ -1.08
RAPGEF3-210ENST00000482843 BAALC-AS2P0C853 105 aa8.3□□□□□ -1.08
RAPGEF3-210ENST00000482843 TRAV13-2A0A0B4J235 113 aa8.3□□□□□ -1.08
RAPGEF3-210ENST00000482843 PRB2P02812 416 aaPredicted RBP8.3□□□□□ -1.08
RAPGEF3-210ENST00000482843 SPTSSBQ8NFR3 76 aa8.3□□□□□ -1.08
RAPGEF3-210ENST00000482843 LINC00337Q8N6G1 96 aa8.29□□□□□ -1.08
RAPGEF3-210ENST00000482843 SMCR5Q8TEV8 140 aa8.29□□□□□ -1.08
RAPGEF3-210ENST00000482843 ZNF73O43830 326 aaPredicted RBP8.29□□□□□ -1.08
RAPGEF3-210ENST00000482843 LAMTOR3Q9UHA4 124 aa8.28□□□□□ -1.08
RAPGEF3-210ENST00000482843 SLPIP03973 132 aa8.28□□□□□ -1.08
RAPGEF3-210ENST00000482843 HIST1H4AP62805 103 aaKnown RBP8.27□□□□□ -1.09
RAPGEF3-210ENST00000482843 M0R378 163 aa8.27□□□□□ -1.09
RAPGEF3-210ENST00000482843 SMIM11BQ8TCY0 68 aa8.27□□□□□ -1.09
RAPGEF3-210ENST00000482843 TM2D3Q9BRN9 247 aa8.27□□□□□ -1.09
RAPGEF3-210ENST00000482843 LECT2O14960 151 aa8.27□□□□□ -1.09
RAPGEF3-210ENST00000482843 MIFP14174 115 aa8.26□□□□□ -1.09
RAPGEF3-210ENST00000482843 PKD1L1Q8TDX9 2849 aa8.26□□□□□ -1.09
RAPGEF3-210ENST00000482843 IBA57-AS1B1ANH7 110 aa8.26□□□□□ -1.09
RAPGEF3-210ENST00000482843 NCR3O14931 201 aa8.26□□□□□ -1.09
RAPGEF3-210ENST00000482843 FAM218AQ96MZ4 157 aa8.26□□□□□ -1.09
RAPGEF3-210ENST00000482843 DEFB121Q5J5C9 76 aa8.25□□□□□ -1.09
RAPGEF3-210ENST00000482843 SPAG11BQ08648 103 aa8.24□□□□□ -1.09
RAPGEF3-210ENST00000482843 Q8NAQ8 132 aa8.24□□□□□ -1.09
RAPGEF3-210ENST00000482843 IGKV2-28A0A075B6P5 120 aa8.24□□□□□ -1.09
RAPGEF3-210ENST00000482843 IGKV2D-28P01615 120 aa8.24□□□□□ -1.09
RAPGEF3-210ENST00000482843 GHRHP01286 108 aa8.24□□□□□ -1.09
RAPGEF3-210ENST00000482843 HIGD2BQ4VC39 106 aa8.24□□□□□ -1.09
RAPGEF3-210ENST00000482843 SNURFQ9Y675 71 aa8.24□□□□□ -1.09
RAPGEF3-210ENST00000482843 A0A1B0GUV1 79 aa8.23□□□□□ -1.09
RAPGEF3-210ENST00000482843 A8MUN3 132 aa8.23□□□□□ -1.09
RAPGEF3-210ENST00000482843 UNQ6190/PRO20217Q6UXQ8 127 aa8.23□□□□□ -1.09
RAPGEF3-210ENST00000482843 A0A087WYN8 130 aa8.23□□□□□ -1.09
RAPGEF3-210ENST00000482843 FUSP35637 526 aaKnown RBP eCLIP8.23□□□□□ -1.09
RAPGEF3-210ENST00000482843 LYPD5Q6UWN5 251 aa8.23□□□□□ -1.09
RAPGEF3-210ENST00000482843 ACYP1P07311 99 aa8.22□□□□□ -1.09
RAPGEF3-210ENST00000482843 Q6ZTC4 211 aa8.22□□□□□ -1.09
RAPGEF3-210ENST00000482843 XAGE1AQ9HD64 81 aa8.22□□□□□ -1.09
RAPGEF3-210ENST00000482843 TENM3Q9P273 2699 aa8.22□□□□□ -1.09
RAPGEF3-210ENST00000482843 F8WEM9 126 aa8.21□□□□□ -1.09
RAPGEF3-210ENST00000482843 LINC00612Q8N6U2 182 aa8.21□□□□□ -1.09
RAPGEF3-210ENST00000482843 EPM2AB3EWF7 344 aa8.21□□□□□ -1.1
RAPGEF3-210ENST00000482843 PSPHP1O15172 72 aa8.21□□□□□ -1.1
RAPGEF3-210ENST00000482843 KPRPQ5T749 579 aaPredicted RBP8.21□□□□□ -1.1
RAPGEF3-210ENST00000482843 Q8IZM0 81 aa8.21□□□□□ -1.1
RAPGEF3-210ENST00000482843 LRCOL1A6NCL2 159 aa8.2□□□□□ -1.1
RAPGEF3-210ENST00000482843 NANOS2P60321 138 aaKnown RBP8.2□□□□□ -1.1
RAPGEF3-210ENST00000482843 FAM229BQ4G0N7 80 aa8.2□□□□□ -1.1
RAPGEF3-210ENST00000482843 C10orf25Q5T742 122 aa8.2□□□□□ -1.1
RAPGEF3-210ENST00000482843 WFDC10BQ8IUB3 73 aa8.2□□□□□ -1.1
RAPGEF3-210ENST00000482843 C14orf132Q9NPU4 83 aa8.2□□□□□ -1.1
RAPGEF3-210ENST00000482843 TRAV23DV6A0A075B6W5 121 aa8.19□□□□□ -1.1
RAPGEF3-210ENST00000482843 LELP1Q5T871 98 aa8.19□□□□□ -1.1
RAPGEF3-210ENST00000482843 ZNF706Q9Y5V0 76 aaPredicted RBP8.19□□□□□ -1.1
RAPGEF3-210ENST00000482843 CYSRT1A8MQ03 144 aa8.19□□□□□ -1.1
RAPGEF3-210ENST00000482843 KRTAP24-1Q3LI83 254 aa8.19□□□□□ -1.1
RAPGEF3-210ENST00000482843 IGKV2D-24A0A075B6R9 120 aa8.18□□□□□ -1.1
RAPGEF3-210ENST00000482843 A0A0J9YWU9 116 aa8.18□□□□□ -1.1
RAPGEF3-210ENST00000482843 H7BZZ5 65 aa8.18□□□□□ -1.1
RAPGEF3-210ENST00000482843 RPL28P46779 137 aaKnown RBP8.18□□□□□ -1.1
RAPGEF3-210ENST00000482843 KRTAP10-11P60412 298 aa8.18□□□□□ -1.1
RAPGEF3-210ENST00000482843 WFDC9Q8NEX5 89 aa8.17□□□□□ -1.1
RAPGEF3-210ENST00000482843 H0YGX0 51 aa8.16□□□□□ -1.1
RAPGEF3-210ENST00000482843 C6orf99Q4VX62 202 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms