RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 TEP1Q99973 2627 aaKnown RBP-0.26□□□□□ -2.45
GARNL3-213ENST00000464616 MON2Q7Z3U7 1717 aa-0.26□□□□□ -2.45
GARNL3-213ENST00000464616 CLTCQ00610 1675 aaKnown RBP-0.26□□□□□ -2.45
GARNL3-213ENST00000464616 MT-ATP8P03928 68 aa-0.26□□□□□ -2.45
GARNL3-213ENST00000464616 ASIPP42127 132 aa-0.26□□□□□ -2.45
GARNL3-213ENST00000464616 SMIM11AP58511 58 aa-0.26□□□□□ -2.45
GARNL3-213ENST00000464616 ETDBQ3ZM63 59 aa-0.26□□□□□ -2.45
GARNL3-213ENST00000464616 PSENENQ9NZ42 101 aa-0.26□□□□□ -2.45
GARNL3-213ENST00000464616 MAP1AP78559 2803 aaPredicted RBP-0.27□□□□□ -2.45
GARNL3-213ENST00000464616 STAB2Q8WWQ8 2551 aa-0.27□□□□□ -2.45
GARNL3-213ENST00000464616 CUX1P39880 1505 aa-0.27□□□□□ -2.45
GARNL3-213ENST00000464616 CLIP1P30622 1438 aa-0.27□□□□□ -2.45
GARNL3-213ENST00000464616 D6R8Y8 96 aa-0.27□□□□□ -2.45
GARNL3-213ENST00000464616 M0R143 59 aa-0.27□□□□□ -2.45
GARNL3-213ENST00000464616 KLK9Q2XQG4 91 aa-0.27□□□□□ -2.45
GARNL3-213ENST00000464616 MUSTN1Q8IVN3 82 aa-0.27□□□□□ -2.45
GARNL3-213ENST00000464616 C5P01031 1676 aa-0.27□□□□□ -2.45
GARNL3-213ENST00000464616 TRBV7-7A0A0K0K1E9 115 aa-0.28□□□□□ -2.45
GARNL3-213ENST00000464616 SPTY2D1-AS1A0A0U1RR47 76 aa-0.28□□□□□ -2.45
GARNL3-213ENST00000464616 LEPROTL1O95214 131 aa-0.28□□□□□ -2.45
GARNL3-213ENST00000464616 FAUP35544 74 aaKnown RBP-0.28□□□□□ -2.45
GARNL3-213ENST00000464616 PIEZO2Q9H5I5 2752 aa-0.28□□□□□ -2.45
GARNL3-213ENST00000464616 NBEAL1Q6ZS30 2694 aa-0.28□□□□□ -2.45
GARNL3-213ENST00000464616 DCHS2Q6V1P9 2916 aa-0.28□□□□□ -2.45
GARNL3-213ENST00000464616 LRP2P98164 4655 aa-0.28□□□□□ -2.45
GARNL3-213ENST00000464616 TENM2Q9NT68 2774 aa-0.29□□□□□ -2.46
GARNL3-213ENST00000464616 SAMD9Q5K651 1589 aa-0.29□□□□□ -2.46
GARNL3-213ENST00000464616 FANCAO15360 1455 aa-0.29□□□□□ -2.46
GARNL3-213ENST00000464616 VPS8Q8N3P4 1428 aa-0.3□□□□□ -2.46
GARNL3-213ENST00000464616 GYPAP02724 150 aa-0.3□□□□□ -2.46
GARNL3-213ENST00000464616 S100A8P05109 93 aa-0.3□□□□□ -2.46
GARNL3-213ENST00000464616 MRPL34Q9BQ48 92 aaKnown RBP-0.3□□□□□ -2.46
GARNL3-213ENST00000464616 CDKN2A-AS1Q9UH64 79 aa-0.3□□□□□ -2.46
GARNL3-213ENST00000464616 CRYBG1Q9Y4K1 1723 aa-0.3□□□□□ -2.46
GARNL3-213ENST00000464616 MYH4Q9Y623 1939 aa-0.3□□□□□ -2.46
GARNL3-213ENST00000464616 HECTD1Q9ULT8 2610 aa-0.31□□□□□ -2.46
GARNL3-213ENST00000464616 H1FX-AS1Q4G0G2 97 aa-0.31□□□□□ -2.46
GARNL3-213ENST00000464616 NMSQ5H8A3 153 aa-0.31□□□□□ -2.46
GARNL3-213ENST00000464616 C9orf62Q8N4C0 152 aa-0.31□□□□□ -2.46
GARNL3-213ENST00000464616 BSNQ9UPA5 3926 aa-0.32□□□□□ -2.46
GARNL3-213ENST00000464616 UBR3Q6ZT12 1888 aa-0.32□□□□□ -2.46
GARNL3-213ENST00000464616 USH2AO75445 5202 aa-0.32□□□□□ -2.46
GARNL3-213ENST00000464616 DEFB135Q30KP9 77 aa-0.32□□□□□ -2.46
GARNL3-213ENST00000464616 HIGD1BQ9P298 99 aa-0.32□□□□□ -2.46
GARNL3-213ENST00000464616 SPTBN4Q9H254 2564 aa-0.32□□□□□ -2.46
GARNL3-213ENST00000464616 CHD6Q8TD26 2715 aa-0.32□□□□□ -2.46
GARNL3-213ENST00000464616 TNXBP22105 4242 aa-0.32□□□□□ -2.46
GARNL3-213ENST00000464616 HERC1Q15751 4861 aa-0.32□□□□□ -2.46
GARNL3-213ENST00000464616 URB1O60287 2271 aaKnown RBP-0.33□□□□□ -2.46
GARNL3-213ENST00000464616 PKD1L3Q7Z443 1732 aa-0.33□□□□□ -2.46
GARNL3-213ENST00000464616 PDZD2O15018 2839 aa-0.33□□□□□ -2.46
GARNL3-213ENST00000464616 F8WEM9 126 aa-0.33□□□□□ -2.46
GARNL3-213ENST00000464616 RPL38P63173 70 aaKnown RBP-0.33□□□□□ -2.46
GARNL3-213ENST00000464616 HERC2O95714 4834 aa-0.33□□□□□ -2.46
GARNL3-213ENST00000464616 BCORQ6W2J9 1755 aa-0.33□□□□□ -2.46
GARNL3-213ENST00000464616 APC2O95996 2303 aa-0.33□□□□□ -2.46
GARNL3-213ENST00000464616 ATP10BO94823 1461 aa-0.34□□□□□ -2.46
GARNL3-213ENST00000464616 NRXN1Q9ULB1 1477 aa-0.34□□□□□ -2.46
GARNL3-213ENST00000464616 MAP1BP46821 2468 aaKnown RBP-0.34□□□□□ -2.46
GARNL3-213ENST00000464616 NCMAPQ5T1S8 102 aa-0.34□□□□□ -2.46
GARNL3-213ENST00000464616 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.34□□□□□ -2.46
GARNL3-213ENST00000464616 SLIT1O75093 1534 aa-0.34□□□□□ -2.46
GARNL3-213ENST00000464616 DNAJC13O75165 2243 aa-0.34□□□□□ -2.46
GARNL3-213ENST00000464616 RYR1P21817 5038 aa-0.35□□□□□ -2.46
GARNL3-213ENST00000464616 RYR3Q15413 4870 aa-0.35□□□□□ -2.46
GARNL3-213ENST00000464616 DSPP15924 2871 aaKnown RBP-0.35□□□□□ -2.46
GARNL3-213ENST00000464616 UBR4Q5T4S7 5183 aa-0.35□□□□□ -2.47
GARNL3-213ENST00000464616 IGLC2P0DOY2 106 aa-0.35□□□□□ -2.47
GARNL3-213ENST00000464616 IGLC3P0DOY3 106 aa-0.35□□□□□ -2.47
GARNL3-213ENST00000464616 PKIAP61925 76 aa-0.35□□□□□ -2.47
GARNL3-213ENST00000464616 PEA15Q15121 130 aa-0.35□□□□□ -2.47
GARNL3-213ENST00000464616 DEFB112Q30KQ8 113 aa-0.35□□□□□ -2.47
GARNL3-213ENST00000464616 COX6B2Q6YFQ2 88 aa-0.35□□□□□ -2.47
GARNL3-213ENST00000464616 UBE2D4Q9Y2X8 147 aa-0.35□□□□□ -2.47
GARNL3-213ENST00000464616 RGPD2P0DJD1 1756 aa-0.35□□□□□ -2.47
GARNL3-213ENST00000464616 EP300Q09472 2414 aaPredicted RBP-0.35□□□□□ -2.47
GARNL3-213ENST00000464616 KIAA1109Q2LD37 5005 aa-0.35□□□□□ -2.47
GARNL3-213ENST00000464616 TGP01266 2768 aa-0.35□□□□□ -2.47
GARNL3-213ENST00000464616 WNK1Q9H4A3 2382 aa-0.35□□□□□ -2.47
GARNL3-213ENST00000464616 ITPR3Q14573 2671 aa-0.36□□□□□ -2.47
GARNL3-213ENST00000464616 HEPN1Q6WQI6 88 aa-0.36□□□□□ -2.47
GARNL3-213ENST00000464616 NIPBLQ6KC79 2804 aaeCLIP-0.36□□□□□ -2.47
GARNL3-213ENST00000464616 RGPD8O14715 1765 aaPredicted RBP-0.37□□□□□ -2.47
GARNL3-213ENST00000464616 RGPD5Q99666 1765 aa-0.37□□□□□ -2.47
GARNL3-213ENST00000464616 HYDINQ4G0P3 5121 aa-0.37□□□□□ -2.47
GARNL3-213ENST00000464616 QSER1Q2KHR3 1735 aa-0.37□□□□□ -2.47
GARNL3-213ENST00000464616 ANKRD26Q9UPS8 1709 aa-0.37□□□□□ -2.47
GARNL3-213ENST00000464616 HMGN2P05204 90 aaKnown RBP-0.37□□□□□ -2.47
GARNL3-213ENST00000464616 PLGLAQ15195 96 aa-0.37□□□□□ -2.47
GARNL3-213ENST00000464616 FAT1Q14517 4588 aa-0.37□□□□□ -2.47
GARNL3-213ENST00000464616 USP9XQ93008 2570 aaPredicted RBP-0.37□□□□□ -2.47
GARNL3-213ENST00000464616 EPPK1P58107 5090 aaKnown RBP-0.37□□□□□ -2.47
GARNL3-213ENST00000464616 LRP1BQ9NZR2 4599 aa-0.37□□□□□ -2.47
GARNL3-213ENST00000464616 CHD8Q9HCK8 2581 aa-0.38□□□□□ -2.47
GARNL3-213ENST00000464616 PRRC2CQ9Y520 2896 aaKnown RBP-0.38□□□□□ -2.47
GARNL3-213ENST00000464616 GVINP1Q7Z2Y8 2422 aa-0.38□□□□□ -2.47
GARNL3-213ENST00000464616 A0A1B0GUT8 65 aa-0.38□□□□□ -2.47
GARNL3-213ENST00000464616 CYB5AP00167 134 aa-0.38□□□□□ -2.47
GARNL3-213ENST00000464616 AKAP12Q02952 1782 aa-0.38□□□□□ -2.47
GARNL3-213ENST00000464616 SPTA1P02549 2419 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 632.2 ms