RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Gm10277Q6R5C6 214 aa6.14□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Olfr745Q7TRL9 328 aa6.14□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Gm5111Q8C9M4 190 aa6.14□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Vmn1r179Q8R2B4 323 aa6.14□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Q8VC23 124 aa6.14□□□□□ -1.43
Bdnf-209ENSMUST00000111050 PinlypQ9CQD7 212 aa6.14□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Xlr5cQ9JJR2 179 aa6.14□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Pf4Q9Z126 105 aa6.14□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Tcrg-C1A0A075B5Z0 172 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Gm28778A0A087WSK7 233 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Gm45785A0A1B0GT05 94 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Bet1lO35153 111 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Defa3P28310 93 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Defa10P50708 93 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Defa15P50713 93 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Defa-rs12P50716 91 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Ndufc2Q9CQ54 120 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Dkk2Q9QYZ8 259 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Spry4Q9WTP2 300 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Dmxl1Q6PNC0 3013 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Igkv13-84A0A140T8N3 115 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Cnih1O35372 144 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Cr2P19070 1025 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Fgf6P21658 208 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Neurog3P70661 214 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Q8BTG6 205 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Pgpep1Q9ESW8 209 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Lama1P19137 3084 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Abca1P41233 2261 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Igkv6-32A0A140T8N9 115 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 P01806 116 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Cox7cP17665 63 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Rpl13aP19253 203 aaKnown RBP6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Ccl12Q62401 104 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Ttc9cQ810A3 171 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Sox21Q811W0 276 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Timm21Q8CCM6 249 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Prss28Q924N9 274 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 H2afb1Q9CQ70 111 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Tmem178aQ9CZ16 297 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Vmn1r61W4VSP5 300 aa6.13□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Ahctf1Q8CJF7 2243 aaKnown RBP6.12□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Esp4A8R0T8 117 aa6.12□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Col8a2P25318 699 aa6.12□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Gm9945Q8BNZ3 91 aa6.12□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Cdip1Q9DB75 208 aa6.12□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Rabac1Q9Z0S9 185 aa6.12□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Piezo2Q8CD54 2822 aa6.12□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Olfr177E9Q7W1 309 aa6.12□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Igkv7-33P01632 114 aa6.12□□□□□ -1.43
Bdnf-209ENSMUST00000111050 GrnP28798 589 aaKnown RBP6.12□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Cdv3Q4VAA2 281 aaKnown RBP6.12□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Znrd1Q791N7 123 aa6.12□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Olfr1337A2ACY8 315 aa6.12□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Tmem240B2RWJ3 173 aa6.12□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Omt2bD3YX29 119 aa6.12□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Smim20D3Z7Q2 69 aa6.12□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Fxyd7P59648 80 aa6.12□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Crybb3Q9JJU9 211 aa6.12□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Arl3Q9WUL7 182 aa6.12□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Prune2Q52KR3 3084 aa6.12□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Trav14d-1A0A075B6B1 121 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Tmem8bB1AWJ5 472 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 EnsaP60840 121 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Runx1Q03347 451 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Bricd5Q8BV89 174 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Rasl10aQ8K5A4 203 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Ormdl3Q9CPZ6 153 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Tspan13Q9D8C2 204 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Celsr1O35161 3034 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Chd7A2AJK6 2986 aaKnown RBP6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Trav6d-3A0A075B6B3 112 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Gm21060J3KMU4 56 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Hist1h1tQ07133 208 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Ssbp4Q3U4B1 363 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Trav6-3Q5R1E6 112 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Ighv1-22A0A075B5U7 117 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 3110082J24RikF6Z6Z2 108 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Cer1O55233 272 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Nkx3-1P97436 237 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Tctn2Q2MV57 700 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Wfdc8Q4KUS1 273 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Olfr317Q5NCD6 327 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Olfr365Q8VFT2 312 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Klk7Q91VE3 249 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Tmem189Q99LQ7 271 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Pip4p2Q9CZX7 257 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Asxl3Q8C4A5 2259 aa6.11□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Apc2Q9Z1K7 2274 aa6.1□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Igkv14-111A0A140T8P9 117 aa6.1□□□□□ -1.43
Bdnf-209ENSMUST00000111050 RhodP97348 210 aa6.1□□□□□ -1.43
Bdnf-209ENSMUST00000111050 D730048I06RikQ9CQB8 106 aa6.1□□□□□ -1.43
Bdnf-209ENSMUST00000111050 CklfQ9DAS1 152 aa6.1□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Gm6812B1AXU1 112 aa6.1□□□□□ -1.43
Bdnf-209ENSMUST00000111050 1700020N15RikL7MTX3 112 aa6.1□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Gm20878L7N244 103 aa6.1□□□□□ -1.43
Bdnf-209ENSMUST00000111050 MyadmO35682 320 aaKnown RBP6.1□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Ccl4P14097 92 aa6.1□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Tmem136Q3TYE7 245 aa6.1□□□□□ -1.43
Bdnf-209ENSMUST00000111050 Fam110aQ8R184 296 aa6.1□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 63.2 ms