RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Srsf1Q6PDM2 248 aaKnown RBP9.04□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Usmg5Q78IK2 58 aa9.04□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Zfp950A0A0U1RQ46 609 aa9.04□□□□□ -0.96
Scn8a-203ENSMUST00000108908 P01788 123 aa9.04□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Iglc2P01844 104 aa9.04□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Gm1553Q66VB7 94 aa9.04□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Zfp27P10077 819 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Zfp11P10751 647 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Ighv1-36A0A0A6YXT2 117 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Igkv13-84A0A140T8N3 115 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Rpl35aO55142 110 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Fxyd7P59648 80 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Gm5150Q1AN92 299 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Ahctf1Q8CJF7 2243 aaKnown RBP9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Olfr1337A2ACY8 315 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Q3UNZ8 350 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Sptbn2Q68FG2 2388 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Sdk2Q6V4S5 2176 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 TncQ80YX1 2110 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Myod1P10085 318 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 EtdQ80SW5 59 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Trav9d-1A0A075B699 112 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 F11rO88792 300 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Timp3P39876 211 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Mrpl27Q99N92 148 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Dppa2Q9CWH0 301 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Col24a1Q30D77 1733 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Tet1Q3URK3 2007 aaKnown RBP9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 AponG3X9D6 251 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Olfr498Q8VEW2 330 aa9.03□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Hspe1Q64433 102 aaKnown RBP9.02□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Parm1Q923D3 296 aa9.02□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Gpx7Q99LJ6 186 aa9.02□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Prr3Q811B5 190 aaKnown RBP9.02□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Sptbn1Q62261 2363 aaKnown RBP9.02□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Trav6-4A0A075B6B4 115 aa9.02□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Hist1h2bmP10854 126 aa9.02□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Defa-rs12P50716 91 aa9.02□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Hist1h2bhQ64478 126 aa9.02□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Hist2h2bbQ64525 126 aa9.02□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Hist1h2bcQ6ZWY9 126 aaKnown RBP9.02□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Cdk2ap2Q9CPY4 127 aa9.02□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Trav19A0A0B4J1K4 119 aa9.02□□□□□ -0.97
Scn8a-203ENSMUST00000108908 H2al2bA9Z055 111 aa9.02□□□□□ -0.97
Scn8a-203ENSMUST00000108908 1110002E22RikE0CYV9 1786 aa9.02□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Zfp407G3UVV3 2246 aa9.01□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Igkv4-63A0A0G2JFU6 117 aa9.01□□□□□ -0.97
Scn8a-203ENSMUST00000108908 P01726 129 aa9.01□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Gsx1P31315 261 aa9.01□□□□□ -0.97
Scn8a-203ENSMUST00000108908 C1qtnf9Q4ZJN1 333 aa9.01□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Fhl4Q8CDC8 279 aa9.01□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Derl1Q99J56 251 aa9.01□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Igkv4-80A0A075B5L7 116 aa9.01□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Trbv12-2A0A0B4J1H1 124 aa9.01□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Cysltr1Q99JA4 352 aa9.01□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Rnf138Q9CQE0 245 aaKnown RBP9.01□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Fbln7Q501P1 440 aa9.01□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Igkv14-111A0A140T8P9 117 aa9.01□□□□□ -0.97
Scn8a-203ENSMUST00000108908 HelzQ6DFV5 1964 aaKnown RBP9.01□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Esp24A8R0V6 68 aa9.01□□□□□ -0.97
Scn8a-203ENSMUST00000108908 H1fxQ80ZM5 188 aa9.01□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Igkv4-71A0A0G2JEH0 117 aa9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Gm11444F6QMA6 170 aa9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Klrd1O54707 179 aa9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Tmem241Q3UME2 297 aa9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Dph3Q8K0W9 82 aa9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Rnf126Q91YL2 313 aa9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Trdv2-1A0A0G2JGB9 116 aa9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 P01725 110 aa9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Tmem190Q9D2E9 166 aa9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Asxl3Q8C4A5 2259 aa9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Ntf4Q80VU4 209 aa9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Znf146Q8BQN6 292 aa9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 CrebbpP45481 2441 aa9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Ighv3-4A0A0A6YXF1 117 aa9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Ighv1-69A0A0G2JFS5 117 aa9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Pip4p2Q9CZX7 257 aa9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Nup210Q9QY81 1886 aaKnown RBP9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Gm10775Q3V290 127 aa9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Olfr1373Q7TQT6 311 aa9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Klhdc1Q80YG3 406 aa9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Higd1bQ99JY6 98 aa9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 PoleQ9WVF7 2283 aa9□□□□□ -0.97
Scn8a-203ENSMUST00000108908 P01660 111 aa8.99□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Trav2Q5R1I9 109 aa8.99□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Cox6cQ9CPQ1 76 aa8.99□□□□□ -0.97
Scn8a-203ENSMUST00000108908 G6pc2Q9Z186 355 aa8.99□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Heatr5aQ5PRF0 2038 aa8.99□□□□□ -0.97
Scn8a-203ENSMUST00000108908 P01787 123 aa8.99□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Olfr477Q8VGI6 310 aa8.99□□□□□ -0.97
Scn8a-203ENSMUST00000108908 EpopQ7TNS8 369 aa8.99□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Gm5105Q8C6Y9 112 aa8.99□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Gkn1Q9CR36 201 aa8.99□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Trdv1A0A075B657 112 aa8.99□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Defa-rs10Q64263 91 aa8.99□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Olfr33Q8VGX7 318 aa8.99□□□□□ -0.97
Scn8a-203ENSMUST00000108908 PlnP61014 52 aa8.99□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Trav3-3Q5R1C3 114 aa8.99□□□□□ -0.97
Scn8a-203ENSMUST00000108908 RetnQ99P87 114 aa8.99□□□□□ -0.97
Scn8a-203ENSMUST00000108908 Prok2Q9QXU7 128 aa8.99□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 56.6 ms