RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Psg20E9Q9B4 475 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 B2mP01887 119 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Reg1P43137 165 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Defa16P50714 93 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Ube2d2bQ6ZWY6 147 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Ceacam9Q78T27 234 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Fam110dQ80X91 271 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Snx22Q8C084 192 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Dmrtc2Q8CGW9 370 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Olfr968Q8VFN4 314 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Prss21Q9JHJ7 324 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Vmn1r61W4VSP5 300 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Olfr177E9Q7W1 309 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm6594J3QM43 95 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Adrb3P25962 400 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Reep5Q60870 185 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Tmem167bQ80X45 74 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Fam174bQ8K064 153 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Q8VCE4 163 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Olfr484Q8VFD3 321 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Olfr1441Q8VFV3 318 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Fbxw4Q9JMJ2 410 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 SbsponQ3UPR9 264 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Clec4b2Q67DU8 208 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Znf641Q8BZ34 422 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm4763Q8CFJ5 196 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Olfr498Q8VEW2 330 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Olfr1258Q8VGN6 311 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Cldn16Q925N4 235 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Atp23Q9CWQ3 201 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Cnn3Q9DAW9 330 aaKnown RBP5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Slamf6Q9ET39 351 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Bex1Q9R224 128 aa5.58□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm5157A0A087WRH8 301 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Tmem29A2ANF5 204 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Ly6g6fB2RXM6 300 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Lcn2P11672 200 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 SeboxP70368 190 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 AgaQ64191 346 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Znf474Q6V5K9 347 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Olfr958Q8VEY3 312 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Olfr127Q8VF25 323 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Ssbp1Q9CYR0 152 aaKnown RBP5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Q9D7E4 109 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Trem3Q9JKE1 183 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Sfrp4Q9Z1N6 351 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 NipblQ6KCD5 2798 aaKnown RBP5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm28372A0A087WNV0 220 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Sigmar1O55242 223 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Foxh1O88621 401 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Saa1P05366 122 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Defa20Q45VN2 95 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Sdr39u1Q5M8N4 308 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Plk3Q60806 631 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Slamf7Q8BHK6 333 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 TctaQ8VEA7 122 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Pth2Q91W27 100 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Cd200r1Q9ES57 326 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Cml3Q9JIY8 226 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Tcrg-V5A0A0G2JGV5 113 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm16442D3YZG3 307 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Olfr978E9Q985 311 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Tmem95P0DJF3 176 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Dynlt3P56387 116 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Isg15Q64339 161 aaKnown RBP5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 AY761184Q9D848 116 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 RprmQ9JJ72 109 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 HilpdaQ9JLS0 64 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Pmaip1Q9JM54 103 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Ncoa6Q9JL19 2067 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gnb4P29387 340 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Rpl23P62830 140 aaKnown RBP5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Defb30Q30KN4 75 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Tm2d3Q8BJ83 261 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Mixl1Q9WUI0 231 aa5.57□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Trav18A0A075B656 109 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm4791J3QQ14 102 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 C1ql4Q4ZJM9 238 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Slc35d2Q762D5 326 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Fam24aQ8CF27 98 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Klre1Q8CJC7 226 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Egr4Q9WUF2 478 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Ighv1-7A0A075B5T7 117 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm21778A0A087WNP8 232 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Trdv2-1A0A0G2JGB9 116 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm20458E9PXJ7 78 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm12169F2Z474 250 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Zfp977L7N2E7 438 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Syngr2O55101 224 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Trdv2-2Q5R1A4 116 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Leprotl1Q9CQ74 131 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Ube2cQ9D1C1 179 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Vamp8O70404 101 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Ube2e1P52482 193 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Plscr4P58196 326 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Gm10842Q3U587 122 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 H2al1nQ497L1 109 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Fam19a2Q7TPG7 131 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Cphx2Q8BX39 182 aa5.56□□□□□ -1.52
Bdnf-201ENSMUST00000053317 Pxmp4Q9JJW0 212 aa5.56□□□□□ -1.52
Retrieved 100 of 22,080 RNA–protein pairs in 115.1 ms