RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Khdc1aQ3UWR2 166 aa8.75□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Khdc1cQ4KL78 166 aa8.75□□□□□ -1.01
Rnf40-201ENSMUST00000033088 OstcQ78XF5 149 aa8.75□□□□□ -1.01
Rnf40-201ENSMUST00000033088 RtbdnQ8QZY4 247 aa8.75□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Rpl15Q9CZM2 204 aaKnown RBP8.75□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Cpsf4lE9Q2N0 280 aa8.75□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Lynx1P0DP60 116 aa8.75□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Psg17Q62056 475 aa8.75□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Wdr82Q8BFQ4 313 aa8.75□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Slc25a29Q8BL03 306 aa8.75□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Mrpl33Q9CQP0 65 aa8.75□□□□□ -1.01
Rnf40-201ENSMUST00000033088 DnlzQ9D113 177 aa8.75□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Tax1bp3Q9DBG9 124 aa8.75□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Iglv1A0A075B663 117 aa8.75□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Trav6d-7A0A075B6B0 112 aa8.75□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Olfr1337A2ACY8 315 aa8.75□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Loxl2P58022 776 aa8.75□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Tmed6Q9CQG0 239 aa8.75□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Scgb1b24B1B0N6 92 aa8.74□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Cd209gD3Z5D4 194 aa8.74□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Gm21983D6RFS9 131 aa8.74□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Q5BN45 167 aa8.74□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Tnfrsf13bQ9ET35 249 aa8.74□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Trbv19A0A0B4J1H4 117 aa8.74□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Gm45844A0A1B0GRQ2 137 aa8.74□□□□□ -1.01
Rnf40-201ENSMUST00000033088 MsmpB1AWI6 139 aa8.74□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Neurog3P70661 214 aa8.74□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Tm2d1Q99MB3 208 aa8.74□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Zfp119aQ9JIC0 545 aa8.74□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Fbln5Q9WVH9 448 aa8.74□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Piezo1E2JF22 2547 aa8.74□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Arhgef17Q80U35 2057 aa8.74□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Cited2O35740 269 aa8.74□□□□□ -1.01
Rnf40-201ENSMUST00000033088 P01791 123 aa8.74□□□□□ -1.01
Rnf40-201ENSMUST00000033088 P03980 138 aa8.74□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Csn3P06796 181 aa8.74□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Slc17a9Q8VCL5 447 aa8.74□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Hcfc2Q9D968 241 aa8.74□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Dazap2Q9DCP9 168 aa8.74□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Trav6-1A0A075B5Z8 112 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Tmem238A9JSM3 176 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Tmem262D3Z338 116 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Rpl27aP14115 148 aaKnown RBP8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Prrx2Q06348 247 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Prdm6Q3UZD5 596 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Il22ra2Q80XF5 230 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Sox21Q811W0 276 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Bhlha15Q9QYC3 197 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Zfp36P22893 319 aaKnown RBP8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Ccl11P48298 97 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Slc25a48Q8BW66 306 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 C1qtnf4Q8R066 326 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Josd1Q9DBJ6 202 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Efemp2Q9WVJ9 443 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 DmdP11531 3678 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Tcrg-C2A0A075B5Z2 167 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Trav12d-3A0A075B6A4 115 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 P01853 167 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 G430049J08RikQ3TL09 166 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Lyplal1Q3UFF7 239 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Rbfox3Q8BIF2 374 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 COA4Q8BT51 87 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Stpg2Q8C8J0 561 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Ndufs8Q8K3J1 212 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Znhit3Q9CQK1 151 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 4930412O13RikQ9D5M9 106 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 MgaA2AWL7 3003 aaKnown RBP8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 FryE9Q8I9 3020 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Thy1P01831 162 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Mrpl20Q9CQL4 149 aa8.73□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Prrc2cQ3TLH4 2846 aaKnown RBP8.72□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Arhgap32Q811P8 2089 aa8.72□□□□□ -1.01
Rnf40-201ENSMUST00000033088 P01783 136 aa8.72□□□□□ -1.01
Rnf40-201ENSMUST00000033088 AgerQ62151 402 aa8.72□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Rasl11aQ6IMB1 242 aa8.72□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Gpbar1Q80SS6 329 aa8.72□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Mmp17Q9R0S3 578 aa8.72□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Ccl8Q9Z121 97 aa8.72□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Trbv31A0A075B5J5 111 aa8.72□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Cks1bP61025 79 aa8.72□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Gm5150Q1AN92 299 aa8.72□□□□□ -1.01
Rnf40-201ENSMUST00000033088 F11rO88792 300 aa8.72□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Rbms1Q91W59 403 aaKnown RBP8.72□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Mrpl16Q99N93 251 aa8.72□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Lrrk2Q5S006 2527 aa8.71□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Gm6812B1AXU1 112 aa8.71□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Gm21974F6W3F3 119 aa8.71□□□□□ -1.01
Rnf40-201ENSMUST00000033088 1700020N15RikL7MTX3 112 aa8.71□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Gata3P23772 443 aa8.71□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Gm9733Q1AN91 178 aa8.71□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Ube2d2bQ6ZWY6 147 aa8.71□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Higd1cQ76I25 96 aa8.71□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Gm26558Q8BLW8 286 aa8.71□□□□□ -1.01
Rnf40-201ENSMUST00000033088 BC106179Q8C9L1 186 aa8.71□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Cox19Q8K0C8 92 aa8.71□□□□□ -1.01
Rnf40-201ENSMUST00000033088 MrapQ9D159 127 aa8.71□□□□□ -1.01
Rnf40-201ENSMUST00000033088 Trav6n-5A0A075B621 112 aa8.71□□□□□ -1.02
Rnf40-201ENSMUST00000033088 Trav6-5A0A075B6B5 112 aa8.71□□□□□ -1.02
Rnf40-201ENSMUST00000033088 Ear14F6YUX7 155 aa8.71□□□□□ -1.02
Rnf40-201ENSMUST00000033088 3110082J24RikF6Z6Z2 108 aa8.71□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 42.1 ms