RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Trav6d-4Q5R1I0 115 aa8.33□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Prb1Q91X93 504 aa8.33□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Shank1D3YZU1 2167 aa8.33□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Defa16P50714 93 aa8.33□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Tmem30bQ8BHG3 353 aa8.33□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Susd3Q9D176 269 aa8.33□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Cbln3Q9JHG0 197 aa8.33□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Slc25a15Q9WVD5 301 aa8.33□□□□□ -1.08
Ubr1-201ENSMUST00000028728 EpopQ7TNS8 369 aa8.33□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Ighv9-3A0A0B4J1J5 117 aa8.33□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Dkk1O54908 272 aa8.33□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Rnase2aQ8K196 155 aa8.33□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Phlda3Q9WV95 125 aa8.33□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Gm5819E9PZ96 154 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 TtrP07309 147 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Csrp1P97315 193 aaKnown RBP8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 4930544G11RikQ9CR99 193 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Rnf115Q9D0C1 305 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Mrpl53Q9D1H8 118 aaKnown RBP8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Igkv4-91A0A075B5L2 119 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 SNORCQ9CXL7 121 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Higd1aQ9JLR9 95 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 A0A1Y7VLU2 103 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Vmn1r1E9PVR6 306 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Pde6hP61249 83 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Olfr1373Q7TQT6 311 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Prss58Q8BW11 241 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 BmperQ8CJ69 685 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Chac1Q8R3J5 223 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Defb6Q91VD6 63 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 3100002H09RikQ9CXW6 140 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Trav12-3A0A075B648 115 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Ighv5-12-4A0A0A6YWG4 117 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Foxg1Q60987 481 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Itgb4A2A863 1818 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Lrrc25Q8K1T1 297 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Igkv13-85A0A075B666 115 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Gm37388A0A0A6YY46 143 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Gm17660B9UIU9 90 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 ElnP54320 860 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 4930596D02RikQ3V0H9 216 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Oosp2Q4FZG8 168 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 RflnaQ7TS73 204 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Olfr1323Q8VF35 309 aa8.32□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Ly6g5bQ8K1T4 194 aa8.31□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Gm10645Q3UPY1 145 aa8.31□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Mrpl36Q99N90 102 aa8.31□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Mrpl32Q9DCI9 187 aaKnown RBP8.31□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Trav6d-7A0A075B6B0 112 aa8.31□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Prss28Q924N9 274 aa8.31□□□□□ -1.08
Ubr1-201ENSMUST00000028728 P04945 108 aa8.31□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Adrb3P25962 400 aa8.31□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Pate4Q09098 99 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Gm4792Q569Q2 183 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 CrebbpP45481 2441 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 PtprdQ64487 1912 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Abca7Q91V24 2159 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Tmem40Q4FJU9 225 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Card19Q9D1I2 183 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Ighv1-16A0A075B5U1 98 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Trav6n-6A0A075B6B2 114 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Foxc2Q61850 494 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Malrd1A2AJX4 2123 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 BC035044E0CXF8 138 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Defa26Q3L180 93 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Gm10803Q3TZS6 135 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Trav7-2Q5R1I3 112 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Olfr745Q7TRL9 328 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Ccpg1osV9GXK1 122 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 LtaP09225 202 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Slc25a48Q8BW66 306 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Dtx2Q8R3P2 619 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Ifitm2Q99J93 144 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Gemin7Q9CWY4 129 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Plxna3P70208 1872 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Tnrc6aQ3UHK8 1896 aaKnown RBP8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Dock7Q8R1A4 2130 aaKnown RBP8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Gm20878L7N244 103 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 F11rO88792 300 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Gm17334Q8C6U3 126 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Tmem129Q8K304 362 aa8.3□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Gm7849D3YX03 116 aa8.29□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Gm17727E9Q4V7 109 aa8.29□□□□□ -1.08
Ubr1-201ENSMUST00000028728 IcosQ9WVS0 200 aa8.29□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Clec4b2Q67DU8 208 aa8.29□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Olfr211Q8VGH2 309 aa8.29□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Rnf125Q9D9R0 233 aa8.29□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Mcrip2Q9CQB2 160 aaKnown RBP8.29□□□□□ -1.08
Ubr1-201ENSMUST00000028728 ThadaA8C756 1938 aa8.29□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Igkv14-100A0A0G2JG36 117 aa8.29□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Defa28D3Z1V9 94 aa8.29□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Defa25Q5G864 92 aa8.29□□□□□ -1.08
Ubr1-201ENSMUST00000028728 VsirQ9D659 308 aa8.29□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Ociad2Q9D8W7 154 aa8.29□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Sod1P08228 154 aaKnown RBP8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Srp14P16254 110 aaKnown RBP8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Zg16Q8K0C5 167 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Lmo1Q924W9 156 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 LitafQ9JLJ0 161 aa8.28□□□□□ -1.08
Ubr1-201ENSMUST00000028728 Ighv1-26A0A075B5V0 117 aa8.28□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 51.2 ms