RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Gm29666A0A087WQ99 126 aa8.98□□□□□ -0.97
Ciita-201ENSMUST00000023147 P01726 129 aa8.98□□□□□ -0.97
Ciita-201ENSMUST00000023147 Hspe1Q64433 102 aaKnown RBP8.98□□□□□ -0.97
Ciita-201ENSMUST00000023147 Scn2aA0A0J9YTW6 2006 aa8.98□□□□□ -0.97
Ciita-201ENSMUST00000023147 Wnk1P83741 2377 aa8.98□□□□□ -0.97
Ciita-201ENSMUST00000023147 Trav19A0A0B4J1K4 119 aa8.98□□□□□ -0.97
Ciita-201ENSMUST00000023147 Tm4sf19E9Q9H8 206 aa8.98□□□□□ -0.97
Ciita-201ENSMUST00000023147 RhogP84096 191 aa8.98□□□□□ -0.97
Ciita-201ENSMUST00000023147 Olfr491Q8VG06 310 aa8.98□□□□□ -0.97
Ciita-201ENSMUST00000023147 Foxh1O88621 401 aa8.97□□□□□ -0.97
Ciita-201ENSMUST00000023147 Rnf114Q9ET26 229 aa8.97□□□□□ -0.97
Ciita-201ENSMUST00000023147 Igkv4-70A0A0B4J1I5 116 aa8.97□□□□□ -0.97
Ciita-201ENSMUST00000023147 Wisp1O54775 367 aa8.97□□□□□ -0.97
Ciita-201ENSMUST00000023147 Wipf3P0C7L0 485 aa8.97□□□□□ -0.97
Ciita-201ENSMUST00000023147 Klk1b27Q9JM71 263 aa8.97□□□□□ -0.97
Ciita-201ENSMUST00000023147 Col6a6Q8C6K9 2265 aa8.97□□□□□ -0.97
Ciita-201ENSMUST00000023147 Rp1l1Q8CGM2 1859 aa8.97□□□□□ -0.97
Ciita-201ENSMUST00000023147 Gm7489Q3UT34 171 aa8.97□□□□□ -0.97
Ciita-201ENSMUST00000023147 Znf664Q4VA44 261 aa8.97□□□□□ -0.97
Ciita-201ENSMUST00000023147 Hist2h2beQ64524 126 aa8.97□□□□□ -0.97
Ciita-201ENSMUST00000023147 Tmem89Q9DA04 169 aa8.97□□□□□ -0.97
Ciita-201ENSMUST00000023147 Gm21789J3QMZ1 123 aa8.97□□□□□ -0.97
Ciita-201ENSMUST00000023147 Gm21870J3QPN2 123 aa8.97□□□□□ -0.97
Ciita-201ENSMUST00000023147 Gm21883J3QPV3 123 aa8.97□□□□□ -0.97
Ciita-201ENSMUST00000023147 Zfp72Q0VFY0 435 aa8.97□□□□□ -0.97
Ciita-201ENSMUST00000023147 Gm10842Q3U587 122 aa8.97□□□□□ -0.97
Ciita-201ENSMUST00000023147 C1qtnf9Q4ZJN1 333 aa8.97□□□□□ -0.97
Ciita-201ENSMUST00000023147 Nrn1Q8CFV4 142 aa8.97□□□□□ -0.97
Ciita-201ENSMUST00000023147 Lyzl1Q9CPX3 148 aa8.97□□□□□ -0.97
Ciita-201ENSMUST00000023147 Igkv6-14A0A140T8P1 115 aa8.96□□□□□ -0.97
Ciita-201ENSMUST00000023147 P04219 140 aa8.96□□□□□ -0.97
Ciita-201ENSMUST00000023147 P18532 116 aa8.96□□□□□ -0.97
Ciita-201ENSMUST00000023147 Cr2P19070 1025 aa8.96□□□□□ -0.97
Ciita-201ENSMUST00000023147 Dynlt3P56387 116 aa8.96□□□□□ -0.97
Ciita-201ENSMUST00000023147 Wdr83osQ6ZWX0 106 aa8.96□□□□□ -0.97
Ciita-201ENSMUST00000023147 Iba57Q8CAK1 358 aaKnown RBP8.96□□□□□ -0.97
Ciita-201ENSMUST00000023147 Rnase6Q9D244 153 aa8.96□□□□□ -0.97
Ciita-201ENSMUST00000023147 Nup210Q9QY81 1886 aaKnown RBP8.96□□□□□ -0.97
Ciita-201ENSMUST00000023147 OstcQ78XF5 149 aa8.96□□□□□ -0.97
Ciita-201ENSMUST00000023147 Notch3Q61982 2318 aa8.96□□□□□ -0.97
Ciita-201ENSMUST00000023147 Tmem8bB1AWJ5 472 aa8.96□□□□□ -0.98
Ciita-201ENSMUST00000023147 Gm6871L7N248 545 aa8.96□□□□□ -0.98
Ciita-201ENSMUST00000023147 Efna2P52801 209 aa8.96□□□□□ -0.98
Ciita-201ENSMUST00000023147 Cd59bP58019 129 aa8.96□□□□□ -0.98
Ciita-201ENSMUST00000023147 Dmrt3Q80WT2 476 aa8.96□□□□□ -0.98
Ciita-201ENSMUST00000023147 Cxcl14Q9WUQ5 99 aa8.96□□□□□ -0.98
Ciita-201ENSMUST00000023147 Igkv14-130A0A0G2JF45 117 aa8.96□□□□□ -0.98
Ciita-201ENSMUST00000023147 BC035044E0CXF8 138 aa8.96□□□□□ -0.98
Ciita-201ENSMUST00000023147 Spink1P09036 80 aa8.96□□□□□ -0.98
Ciita-201ENSMUST00000023147 Sslp1Q3UN54 99 aa8.96□□□□□ -0.98
Ciita-201ENSMUST00000023147 Zfp420Q7TMN8 578 aa8.96□□□□□ -0.98
Ciita-201ENSMUST00000023147 Cd5lQ9QWK4 352 aa8.96□□□□□ -0.98
Ciita-201ENSMUST00000023147 Ighv8-2A0A0A6YW58 119 aa8.96□□□□□ -0.98
Ciita-201ENSMUST00000023147 Gm5819E9PZ96 154 aa8.96□□□□□ -0.98
Ciita-201ENSMUST00000023147 SbpP15501 199 aa8.96□□□□□ -0.98
Ciita-201ENSMUST00000023147 Gm4792Q569Q2 183 aa8.96□□□□□ -0.98
Ciita-201ENSMUST00000023147 SlaQ60898 281 aa8.96□□□□□ -0.98
Ciita-201ENSMUST00000023147 Tm2d3Q8BJ83 261 aa8.96□□□□□ -0.98
Ciita-201ENSMUST00000023147 Snx22Q8C084 192 aa8.96□□□□□ -0.98
Ciita-201ENSMUST00000023147 Gtf3aQ8VHT7 364 aa8.96□□□□□ -0.98
Ciita-201ENSMUST00000023147 Defb6Q91VD6 63 aa8.96□□□□□ -0.98
Ciita-201ENSMUST00000023147 Med12lQ8BQM9 2157 aa8.95□□□□□ -0.98
Ciita-201ENSMUST00000023147 Cfap46E9Q2C0 2641 aa8.95□□□□□ -0.98
Ciita-201ENSMUST00000023147 Gm26938S4R185 226 aa8.95□□□□□ -0.98
Ciita-201ENSMUST00000023147 Gm20219A0A1B0GRQ3 87 aa8.95□□□□□ -0.98
Ciita-201ENSMUST00000023147 P04945 108 aa8.95□□□□□ -0.98
Ciita-201ENSMUST00000023147 Zglp1Q1WG82 266 aa8.95□□□□□ -0.98
Ciita-201ENSMUST00000023147 YrdcQ3U5F4 280 aa8.95□□□□□ -0.98
Ciita-201ENSMUST00000023147 4931428L18RikQ9D4S9 127 aa8.95□□□□□ -0.98
Ciita-201ENSMUST00000023147 Mrps11Q9DCA2 191 aaKnown RBP8.95□□□□□ -0.98
Ciita-201ENSMUST00000023147 MNCb-2875Q9DCB3 74 aa8.95□□□□□ -0.98
Ciita-201ENSMUST00000023147 Igkv4-57-1A0A075B5M4 119 aa8.95□□□□□ -0.98
Ciita-201ENSMUST00000023147 Usmg5Q78IK2 58 aa8.95□□□□□ -0.98
Ciita-201ENSMUST00000023147 Igkv14-126A0A075B5K0 117 aa8.95□□□□□ -0.98
Ciita-201ENSMUST00000023147 Tcrg-C1A0A075B5Z0 172 aa8.95□□□□□ -0.98
Ciita-201ENSMUST00000023147 Tcrg-C3L7N479 172 aa8.95□□□□□ -0.98
Ciita-201ENSMUST00000023147 Mrpl16Q99N93 251 aa8.95□□□□□ -0.98
Ciita-201ENSMUST00000023147 Tpsab1Q02844 273 aa8.94□□□□□ -0.98
Ciita-201ENSMUST00000023147 Zfp248Q640N4 576 aa8.94□□□□□ -0.98
Ciita-201ENSMUST00000023147 Ypel2Q65Z95 119 aa8.94□□□□□ -0.98
Ciita-201ENSMUST00000023147 Znrf2Q71FD5 238 aa8.94□□□□□ -0.98
Ciita-201ENSMUST00000023147 Ypel1Q9ESC7 118 aa8.94□□□□□ -0.98
Ciita-201ENSMUST00000023147 Ovol1Q9WTJ2 267 aa8.94□□□□□ -0.98
Ciita-201ENSMUST00000023147 Prpf8Q99PV0 2335 aaKnown RBP8.94□□□□□ -0.98
Ciita-201ENSMUST00000023147 Sap30O88574 220 aa8.94□□□□□ -0.98
Ciita-201ENSMUST00000023147 Wnt2P21552 360 aa8.94□□□□□ -0.98
Ciita-201ENSMUST00000023147 Q4KKZ1 196 aa8.94□□□□□ -0.98
Ciita-201ENSMUST00000023147 Gm10521E9PZK0 135 aa8.94□□□□□ -0.98
Ciita-201ENSMUST00000023147 CklfQ9DAS1 152 aa8.94□□□□□ -0.98
Ciita-201ENSMUST00000023147 Plxnd1Q3UH93 1925 aa8.94□□□□□ -0.98
Ciita-201ENSMUST00000023147 Exph5Q0VAV2 1960 aa8.94□□□□□ -0.98
Ciita-201ENSMUST00000023147 Ms4a12A0A087WSB9 263 aa8.94□□□□□ -0.98
Ciita-201ENSMUST00000023147 Gm7075D3Z497 112 aa8.94□□□□□ -0.98
Ciita-201ENSMUST00000023147 UngP97931 306 aa8.94□□□□□ -0.98
Ciita-201ENSMUST00000023147 Shisal1Q0VBP7 198 aa8.94□□□□□ -0.98
Ciita-201ENSMUST00000023147 2200002J24RikQ9D807 110 aa8.94□□□□□ -0.98
Ciita-201ENSMUST00000023147 Reg4Q9D8G5 157 aa8.94□□□□□ -0.98
Ciita-201ENSMUST00000023147 Igkv4-90A0A075B5L3 117 aa8.93□□□□□ -0.98
Ciita-201ENSMUST00000023147 Igkv3-1A0A075B5P1 119 aa8.93□□□□□ -0.98
Ciita-201ENSMUST00000023147 Ly6g6eQ8K1T6 166 aa8.93□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms