RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Trbv31A0A075B5J5 111 aa13.03□□□□□ -0.32
Trim28-201ENSMUST00000005705 Rpl27aP14115 148 aaKnown RBP13.03□□□□□ -0.32
Trim28-201ENSMUST00000005705 Icam2P35330 277 aa13.03□□□□□ -0.32
Trim28-201ENSMUST00000005705 Pex7P97865 318 aa13.03□□□□□ -0.32
Trim28-201ENSMUST00000005705 V1rd19Q3KNP5 305 aa13.03□□□□□ -0.32
Trim28-201ENSMUST00000005705 GrhprQ91Z53 328 aa13.03□□□□□ -0.32
Trim28-201ENSMUST00000005705 Mrpl32Q9DCI9 187 aaKnown RBP13.03□□□□□ -0.32
Trim28-201ENSMUST00000005705 Scgb1b11A0A087WQJ0 93 aa13.02□□□□□ -0.32
Trim28-201ENSMUST00000005705 Gm15127B1AVZ5 449 aa13.02□□□□□ -0.32
Trim28-201ENSMUST00000005705 Gm15091B1AZM2 449 aa13.02□□□□□ -0.32
Trim28-201ENSMUST00000005705 Obox7Q4KL20 218 aa13.02□□□□□ -0.32
Trim28-201ENSMUST00000005705 Prickle3Q80VL3 624 aa13.02□□□□□ -0.32
Trim28-201ENSMUST00000005705 Tppp3Q9CRB6 176 aaKnown RBP13.02□□□□□ -0.32
Trim28-201ENSMUST00000005705 Usp9xP70398 2559 aaKnown RBP13.02□□□□□ -0.32
Trim28-201ENSMUST00000005705 Ighv5-12-4A0A0A6YWG4 117 aa13.02□□□□□ -0.33
Trim28-201ENSMUST00000005705 Ighv9-3A0A0B4J1J5 117 aa13.02□□□□□ -0.33
Trim28-201ENSMUST00000005705 D930048N14RikA2AA67 225 aa13.02□□□□□ -0.33
Trim28-201ENSMUST00000005705 Defa13P50711 93 aa13.02□□□□□ -0.33
Trim28-201ENSMUST00000005705 Defb20Q30KP3 96 aa13.02□□□□□ -0.33
Trim28-201ENSMUST00000005705 Olfr1242Q8VGM6 306 aa13.02□□□□□ -0.33
Trim28-201ENSMUST00000005705 Dazap1Q9JII5 406 aaKnown RBP13.02□□□□□ -0.33
Trim28-201ENSMUST00000005705 eef1akmt3D3YWP0 232 aa13.01□□□□□ -0.33
Trim28-201ENSMUST00000005705 Brs3O54798 399 aa13.01□□□□□ -0.33
Trim28-201ENSMUST00000005705 Ncor2Q9WU42 2472 aaKnown RBP13.01□□□□□ -0.33
Trim28-201ENSMUST00000005705 Sdk1Q3UH53 2193 aa13.01□□□□□ -0.33
Trim28-201ENSMUST00000005705 Trav5-1A0A075B5Z7 114 aa13.01□□□□□ -0.33
Trim28-201ENSMUST00000005705 Gm11733Q8BQP1 125 aa13.01□□□□□ -0.33
Trim28-201ENSMUST00000005705 MturnQ8CGA4 131 aa13.01□□□□□ -0.33
Trim28-201ENSMUST00000005705 C1qtnf5Q8K479 243 aa13.01□□□□□ -0.33
Trim28-201ENSMUST00000005705 Tmem167aQ9CR64 72 aa13.01□□□□□ -0.33
Trim28-201ENSMUST00000005705 Ociad1Q9CRD0 247 aaKnown RBP13.01□□□□□ -0.33
Trim28-201ENSMUST00000005705 Fxyd4Q9D2W0 88 aa13.01□□□□□ -0.33
Trim28-201ENSMUST00000005705 Trav12-3A0A075B648 115 aa13.01□□□□□ -0.33
Trim28-201ENSMUST00000005705 Gm765B2RVL9 189 aa13.01□□□□□ -0.33
Trim28-201ENSMUST00000005705 Cnih1O35372 144 aa13.01□□□□□ -0.33
Trim28-201ENSMUST00000005705 Lcn2P11672 200 aa13.01□□□□□ -0.33
Trim28-201ENSMUST00000005705 Defa6P50704 93 aa13.01□□□□□ -0.33
Trim28-201ENSMUST00000005705 EpopQ7TNS8 369 aa13.01□□□□□ -0.33
Trim28-201ENSMUST00000005705 Psmg3Q9CZH3 122 aa13.01□□□□□ -0.33
Trim28-201ENSMUST00000005705 Gm26727M0QWT1 121 aa13□□□□□ -0.33
Trim28-201ENSMUST00000005705 Ttc32Q9DAC7 148 aa13□□□□□ -0.33
Trim28-201ENSMUST00000005705 Icam4Q9ERM2 262 aa13□□□□□ -0.33
Trim28-201ENSMUST00000005705 Tmem29A2ANF5 204 aa13□□□□□ -0.33
Trim28-201ENSMUST00000005705 Cox7a2lQ61387 111 aa13□□□□□ -0.33
Trim28-201ENSMUST00000005705 Gm10190Q8BSD7 107 aa13□□□□□ -0.33
Trim28-201ENSMUST00000005705 Gm15128A2ADW8 449 aa13□□□□□ -0.33
Trim28-201ENSMUST00000005705 Gm15080A2BI02 449 aa13□□□□□ -0.33
Trim28-201ENSMUST00000005705 Gm15093A2BI72 449 aa13□□□□□ -0.33
Trim28-201ENSMUST00000005705 Luzp4B1AV09 449 aa13□□□□□ -0.33
Trim28-201ENSMUST00000005705 Gm15107B1B0X0 449 aa13□□□□□ -0.33
Trim28-201ENSMUST00000005705 Gm20458E9PXJ7 78 aa13□□□□□ -0.33
Trim28-201ENSMUST00000005705 Gm15097E9QA14 449 aa13□□□□□ -0.33
Trim28-201ENSMUST00000005705 Gm15085Q62012 449 aa13□□□□□ -0.33
Trim28-201ENSMUST00000005705 Ifna14Q810G3 189 aa13□□□□□ -0.33
Trim28-201ENSMUST00000005705 Olfr1012Q8VFJ7 311 aa13□□□□□ -0.33
Trim28-201ENSMUST00000005705 Tnfrsf23Q9ER63 176 aa13□□□□□ -0.33
Trim28-201ENSMUST00000005705 Gm9920D3YVZ2 140 aa12.99□□□□□ -0.33
Trim28-201ENSMUST00000005705 P01723 117 aa12.99□□□□□ -0.33
Trim28-201ENSMUST00000005705 Prok1Q14A28 105 aa12.99□□□□□ -0.33
Trim28-201ENSMUST00000005705 Ubald2Q8BQH4 164 aa12.99□□□□□ -0.33
Trim28-201ENSMUST00000005705 3100002H09RikQ9CXW6 140 aa12.99□□□□□ -0.33
Trim28-201ENSMUST00000005705 PerpQ9JK95 193 aa12.99□□□□□ -0.33
Trim28-201ENSMUST00000005705 Ighv8-6A0A0A6YXA3 118 aa12.99□□□□□ -0.33
Trim28-201ENSMUST00000005705 Gm5093E9PZB3 174 aa12.99□□□□□ -0.33
Trim28-201ENSMUST00000005705 Gm21913J3KML9 361 aa12.99□□□□□ -0.33
Trim28-201ENSMUST00000005705 Gm21776J3QPJ5 361 aa12.99□□□□□ -0.33
Trim28-201ENSMUST00000005705 P01896 185 aa12.99□□□□□ -0.33
Trim28-201ENSMUST00000005705 Mamld1P0C6A2 803 aa12.99□□□□□ -0.33
Trim28-201ENSMUST00000005705 Ang6Q5GAN0 147 aa12.99□□□□□ -0.33
Trim28-201ENSMUST00000005705 Tcf15Q60756 195 aa12.99□□□□□ -0.33
Trim28-201ENSMUST00000005705 Gm10277Q6R5C6 214 aa12.99□□□□□ -0.33
Trim28-201ENSMUST00000005705 C330021F23RikQ8C7T0 141 aa12.99□□□□□ -0.33
Trim28-201ENSMUST00000005705 Pxt1Q8K459 51 aa12.99□□□□□ -0.33
Trim28-201ENSMUST00000005705 Dscaml1Q4VA61 2053 aa12.99□□□□□ -0.33
Trim28-201ENSMUST00000005705 Trav14n-3A0A075B645 120 aa12.98□□□□□ -0.33
Trim28-201ENSMUST00000005705 Gm45623A0A1B0GSF6 103 aa12.98□□□□□ -0.33
Trim28-201ENSMUST00000005705 Olfr218E9PWV2 313 aa12.98□□□□□ -0.33
Trim28-201ENSMUST00000005705 Onecut1O08755 465 aa12.98□□□□□ -0.33
Trim28-201ENSMUST00000005705 Arf6P62331 175 aa12.98□□□□□ -0.33
Trim28-201ENSMUST00000005705 Olfr1330Q8VEY6 315 aa12.98□□□□□ -0.33
Trim28-201ENSMUST00000005705 Ccl8Q9Z121 97 aa12.98□□□□□ -0.33
Trim28-201ENSMUST00000005705 Klf12O35738 402 aa12.98□□□□□ -0.33
Trim28-201ENSMUST00000005705 Ang4Q3TMQ6 144 aa12.98□□□□□ -0.33
Trim28-201ENSMUST00000005705 Smim6Q3U0I6 56 aa12.98□□□□□ -0.33
Trim28-201ENSMUST00000005705 EsdQ9R0P3 282 aa12.98□□□□□ -0.33
Trim28-201ENSMUST00000005705 H2-DMb1P35737 261 aa12.98□□□□□ -0.33
Trim28-201ENSMUST00000005705 Trappc1Q5NCF2 145 aa12.98□□□□□ -0.33
Trim28-201ENSMUST00000005705 Tmem126aQ9D8Y1 196 aa12.98□□□□□ -0.33
Trim28-201ENSMUST00000005705 Olfr433Q7TRV9 314 aa12.97□□□□□ -0.33
Trim28-201ENSMUST00000005705 Gm5468Q8C3D3 155 aa12.97□□□□□ -0.33
Trim28-201ENSMUST00000005705 Gtf2h5Q8K2X8 71 aa12.97□□□□□ -0.33
Trim28-201ENSMUST00000005705 Lyg1Q9D7Q0 197 aa12.97□□□□□ -0.33
Trim28-201ENSMUST00000005705 Tmprss5Q9ER04 455 aa12.97□□□□□ -0.33
Trim28-201ENSMUST00000005705 Ighv1-7A0A075B5T7 117 aa12.97□□□□□ -0.33
Trim28-201ENSMUST00000005705 Defa30E9QPZ2 93 aa12.97□□□□□ -0.33
Trim28-201ENSMUST00000005705 Gm6970F7DCP6 221 aa12.97□□□□□ -0.33
Trim28-201ENSMUST00000005705 Cd27P41272 250 aa12.97□□□□□ -0.33
Trim28-201ENSMUST00000005705 Gm6040Q4QY32 63 aa12.97□□□□□ -0.33
Trim28-201ENSMUST00000005705 Defa35E9QLQ1 93 aa12.96□□□□□ -0.33
Trim28-201ENSMUST00000005705 Cxcl13O55038 109 aa12.96□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms