RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 CMC4P56277 68 aaPredicted RBP9.81□□□□□ -0.84
CACNA1C-231ENST00000616390 KMT2BQ9UMN6 2715 aaPredicted RBP9.81□□□□□ -0.84
CACNA1C-231ENST00000616390 LINC00482Q8N8I6 264 aa9.81□□□□□ -0.84
CACNA1C-231ENST00000616390 SPATA3Q8NHX4 192 aa9.81□□□□□ -0.84
CACNA1C-231ENST00000616390 IGLV5-45A0A087WSX0 123 aa9.8□□□□□ -0.84
CACNA1C-231ENST00000616390 ATXN8Q156A1 80 aa9.8□□□□□ -0.84
CACNA1C-231ENST00000616390 SBSPONQ8IVN8 264 aa9.8□□□□□ -0.84
CACNA1C-231ENST00000616390 IGLV4-60A0A075B6I1 120 aa9.79□□□□□ -0.84
CACNA1C-231ENST00000616390 DEFB4AO15263 64 aa9.79□□□□□ -0.84
CACNA1C-231ENST00000616390 LINC01561Q8N1V8 128 aa9.79□□□□□ -0.84
CACNA1C-231ENST00000616390 NTN5Q8WTR8 489 aaPredicted RBP9.79□□□□□ -0.84
CACNA1C-231ENST00000616390 DSCR8Q96T75 97 aa9.79□□□□□ -0.84
CACNA1C-231ENST00000616390 FHL2Q14192 279 aa9.78□□□□□ -0.84
CACNA1C-231ENST00000616390 LINC00308Q8TCZ7 52 aa9.78□□□□□ -0.84
CACNA1C-231ENST00000616390 TRRAPQ9Y4A5 3859 aa9.78□□□□□ -0.84
CACNA1C-231ENST00000616390 TRBV30A0A0K0K1B3 111 aa9.78□□□□□ -0.84
CACNA1C-231ENST00000616390 TRACP01848 142 aa9.78□□□□□ -0.84
CACNA1C-231ENST00000616390 IGLV5-39A0A0G2JS06 123 aa9.78□□□□□ -0.84
CACNA1C-231ENST00000616390 LY6G6DO95868 133 aa9.78□□□□□ -0.84
CACNA1C-231ENST00000616390 PMAIP1Q13794 54 aa9.78□□□□□ -0.84
CACNA1C-231ENST00000616390 TRBV6-4A0A1B0GX49 114 aa9.77□□□□□ -0.85
CACNA1C-231ENST00000616390 COX6CP09669 75 aa9.77□□□□□ -0.85
CACNA1C-231ENST00000616390 TEX49A0A1B0GTD5 131 aa9.77□□□□□ -0.85
CACNA1C-231ENST00000616390 SOSTDC1Q6X4U4 206 aa9.77□□□□□ -0.85
CACNA1C-231ENST00000616390 C11orf68Q9H3H3 251 aaKnown RBP9.77□□□□□ -0.85
CACNA1C-231ENST00000616390 NSD1Q96L73 2696 aaPredicted RBP9.76□□□□□ -0.85
CACNA1C-231ENST00000616390 TRBV7-7A0A0K0K1E9 115 aa9.76□□□□□ -0.85
CACNA1C-231ENST00000616390 OVOL2Q9BRP0 275 aa9.76□□□□□ -0.85
CACNA1C-231ENST00000616390 COX7CP15954 63 aa9.76□□□□□ -0.85
CACNA1C-231ENST00000616390 CLPSL2Q6UWE3 100 aa9.76□□□□□ -0.85
CACNA1C-231ENST00000616390 C5orf38Q86SI9 138 aa9.75□□□□□ -0.85
CACNA1C-231ENST00000616390 TRBV6-8A0A0A6YYG3 113 aa9.75□□□□□ -0.85
CACNA1C-231ENST00000616390 INAFM1C9JVW0 142 aa9.75□□□□□ -0.85
CACNA1C-231ENST00000616390 TIMM17BO60830 172 aa9.74□□□□□ -0.85
CACNA1C-231ENST00000616390 GYPEP15421 78 aa9.74□□□□□ -0.85
CACNA1C-231ENST00000616390 C2orf82Q6UX34 121 aa9.74□□□□□ -0.85
CACNA1C-231ENST00000616390 TEP1Q99973 2627 aaKnown RBP9.74□□□□□ -0.85
CACNA1C-231ENST00000616390 H7C423 109 aa9.73□□□□□ -0.85
CACNA1C-231ENST00000616390 NDUFC2O95298 119 aa9.73□□□□□ -0.85
CACNA1C-231ENST00000616390 HIVEP1P15822 2718 aa9.72□□□□□ -0.85
CACNA1C-231ENST00000616390 DEFB135Q30KP9 77 aa9.72□□□□□ -0.85
CACNA1C-231ENST00000616390 TRBV10-2A0A0K0K1G8 114 aa9.72□□□□□ -0.85
CACNA1C-231ENST00000616390 ATP5G1P05496 136 aa9.72□□□□□ -0.85
CACNA1C-231ENST00000616390 COX7B2Q8TF08 81 aa9.72□□□□□ -0.85
CACNA1C-231ENST00000616390 hADV29S1A0JD25 119 aa9.71□□□□□ -0.85
CACNA1C-231ENST00000616390 FAM19A3Q7Z5A8 133 aa9.71□□□□□ -0.86
CACNA1C-231ENST00000616390 XCL1P47992 114 aa9.7□□□□□ -0.86
CACNA1C-231ENST00000616390 LINC00158P58513 81 aa9.7□□□□□ -0.86
CACNA1C-231ENST00000616390 FAM222AQ5U5X8 452 aa9.7□□□□□ -0.86
CACNA1C-231ENST00000616390 MIR7-3HGQ8N6C7 128 aa9.7□□□□□ -0.86
CACNA1C-231ENST00000616390 BRK1Q8WUW1 75 aa9.69□□□□□ -0.86
CACNA1C-231ENST00000616390 IMUPQ9GZP8 106 aa9.69□□□□□ -0.86
CACNA1C-231ENST00000616390 X6R8D5 127 aa9.69□□□□□ -0.86
CACNA1C-231ENST00000616390 TRAV8-4A0A0B4J246 113 aa9.69□□□□□ -0.86
CACNA1C-231ENST00000616390 UBE2WQ96B02 151 aa9.69□□□□□ -0.86
CACNA1C-231ENST00000616390 H3BS24 57 aa9.68□□□□□ -0.86
CACNA1C-231ENST00000616390 LST1O00453 97 aa9.68□□□□□ -0.86
CACNA1C-231ENST00000616390 C11orf45Q8TAV5 145 aa9.68□□□□□ -0.86
CACNA1C-231ENST00000616390 CYSTM1Q9H1C7 97 aa9.67□□□□□ -0.86
CACNA1C-231ENST00000616390 IGHV3OR16-9A0A0B4J2B5 98 aa9.66□□□□□ -0.86
CACNA1C-231ENST00000616390 HTN3P15516 51 aa9.66□□□□□ -0.86
CACNA1C-231ENST00000616390 Q8N3U1 123 aa9.66□□□□□ -0.86
CACNA1C-231ENST00000616390 LINC00959A0A1B0GUT2 108 aa9.66□□□□□ -0.86
CACNA1C-231ENST00000616390 PAX4O43316 350 aa9.66□□□□□ -0.86
CACNA1C-231ENST00000616390 IGLV10-54A0A075B6I4 117 aa9.65□□□□□ -0.86
CACNA1C-231ENST00000616390 COPS9Q8WXC6 57 aa9.65□□□□□ -0.86
CACNA1C-231ENST00000616390 SND1-IT1Q9HBX3 110 aa9.64□□□□□ -0.87
CACNA1C-231ENST00000616390 PRO0255Q9UI72 69 aa9.64□□□□□ -0.87
CACNA1C-231ENST00000616390 EPM2AB3EWF7 344 aa9.64□□□□□ -0.87
CACNA1C-231ENST00000616390 C9orf66Q5T8R8 295 aa9.64□□□□□ -0.87
CACNA1C-231ENST00000616390 COX7A2LO14548 114 aa9.63□□□□□ -0.87
CACNA1C-231ENST00000616390 LINC00337Q8N6G1 96 aa9.63□□□□□ -0.87
CACNA1C-231ENST00000616390 CRPP02741 224 aa9.62□□□□□ -0.87
CACNA1C-231ENST00000616390 Q9HAA7 133 aa9.62□□□□□ -0.87
CACNA1C-231ENST00000616390 A0A087WZ39 114 aa9.62□□□□□ -0.87
CACNA1C-231ENST00000616390 SS18Q15532 418 aa9.62□□□□□ -0.87
CACNA1C-231ENST00000616390 LINC00269Q8N2A0 174 aa9.62□□□□□ -0.87
CACNA1C-231ENST00000616390 FAM218AQ96MZ4 157 aa9.62□□□□□ -0.87
CACNA1C-231ENST00000616390 IGHV4-28A0A0C4DH34 117 aa9.61□□□□□ -0.87
CACNA1C-231ENST00000616390 H3BT86 120 aa9.61□□□□□ -0.87
CACNA1C-231ENST00000616390 CELA1Q9UNI1 258 aa9.61□□□□□ -0.87
CACNA1C-231ENST00000616390 CCL18P55774 89 aa9.61□□□□□ -0.87
CACNA1C-231ENST00000616390 DAD1P61803 113 aa9.61□□□□□ -0.87
CACNA1C-231ENST00000616390 IGKV2-28A0A075B6P5 120 aa9.6□□□□□ -0.87
CACNA1C-231ENST00000616390 IGKV2D-28P01615 120 aa9.6□□□□□ -0.87
CACNA1C-231ENST00000616390 ANGP03950 147 aaKnown RBP9.6□□□□□ -0.87
CACNA1C-231ENST00000616390 LINC00612Q8N6U2 182 aa9.6□□□□□ -0.87
CACNA1C-231ENST00000616390 PKD1L1Q8TDX9 2849 aa9.59□□□□□ -0.87
CACNA1C-231ENST00000616390 MRPL55Q7Z7F7 128 aaKnown RBP9.59□□□□□ -0.87
CACNA1C-231ENST00000616390 FLNBO75369 2602 aaKnown RBP9.58□□□□□ -0.88
CACNA1C-231ENST00000616390 TRAV13-2A0A0B4J235 113 aa9.58□□□□□ -0.88
CACNA1C-231ENST00000616390 BAALC-AS2P0C853 105 aa9.58□□□□□ -0.88
CACNA1C-231ENST00000616390 SMIM11BQ8TCY0 68 aa9.57□□□□□ -0.88
CACNA1C-231ENST00000616390 PRR3P79522 188 aaKnown RBP9.57□□□□□ -0.88
CACNA1C-231ENST00000616390 APOC4P55056 127 aa9.56□□□□□ -0.88
CACNA1C-231ENST00000616390 FAM240AA0A1B0GVK7 77 aa9.56□□□□□ -0.88
CACNA1C-231ENST00000616390 LYRM9A8MSI8 78 aa9.56□□□□□ -0.88
CACNA1C-231ENST00000616390 IBA57-AS1B1ANH7 110 aa9.56□□□□□ -0.88
CACNA1C-231ENST00000616390 F8P00451 2351 aa9.56□□□□□ -0.88
CACNA1C-231ENST00000616390 A0A1B0GUV1 79 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms