RNA–Protein interactions for RNA: ENST00000589882.1

TREM1-206, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

Gene TREM1, Length 1,876 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-206ENST00000589882 TLN1Q9Y490 2541 aaKnown RBP8.23□□□□□ -1.09
TREM1-206ENST00000589882 NAV2Q8IVL1 2488 aa8.23□□□□□ -1.09
TREM1-206ENST00000589882 IGHV4-38-2P0DP08 117 aa8.23□□□□□ -1.09
TREM1-206ENST00000589882 RETNQ9HD89 108 aa8.23□□□□□ -1.09
TREM1-206ENST00000589882 HECTD1Q9ULT8 2610 aa8.23□□□□□ -1.09
TREM1-206ENST00000589882 PTPN13Q12923 2485 aa8.22□□□□□ -1.09
TREM1-206ENST00000589882 A0A096LNT2 108 aa8.22□□□□□ -1.09
TREM1-206ENST00000589882 GNLYP22749 145 aa8.22□□□□□ -1.09
TREM1-206ENST00000589882 LINC00575Q6W349 94 aa8.22□□□□□ -1.09
TREM1-206ENST00000589882 MRPL55Q7Z7F7 128 aaKnown RBP8.22□□□□□ -1.09
TREM1-206ENST00000589882 A0A087WZ39 114 aa8.21□□□□□ -1.09
TREM1-206ENST00000589882 NANOS2P60321 138 aaKnown RBP8.21□□□□□ -1.09
TREM1-206ENST00000589882 UBR5O95071 2799 aaPredicted RBP8.21□□□□□ -1.09
TREM1-206ENST00000589882 hDV103S1A0JD37 113 aa8.21□□□□□ -1.1
TREM1-206ENST00000589882 IGHV3OR16-9A0A0B4J2B5 98 aa8.19□□□□□ -1.1
TREM1-206ENST00000589882 LYRM9A8MSI8 78 aa8.19□□□□□ -1.1
TREM1-206ENST00000589882 SPENQ96T58 3664 aaKnown RBP8.19□□□□□ -1.1
TREM1-206ENST00000589882 J3QKU1 62 aa8.19□□□□□ -1.1
TREM1-206ENST00000589882 TMEM89A2RUT3 159 aa8.18□□□□□ -1.1
TREM1-206ENST00000589882 C11orf71Q6IPW1 123 aa8.18□□□□□ -1.1
TREM1-206ENST00000589882 MUC7Q8TAX7 377 aa8.18□□□□□ -1.1
TREM1-206ENST00000589882 OCR1Q9BZK8 76 aa8.18□□□□□ -1.1
TREM1-206ENST00000589882 FLNCQ14315 2725 aa8.18□□□□□ -1.1
TREM1-206ENST00000589882 INSP01308 110 aa8.17□□□□□ -1.1
TREM1-206ENST00000589882 LMO4P61968 165 aa8.17□□□□□ -1.1
TREM1-206ENST00000589882 COL12A1Q99715 3063 aa8.17□□□□□ -1.1
TREM1-206ENST00000589882 C6orf99Q4VX62 202 aa8.17□□□□□ -1.1
TREM1-206ENST00000589882 NBPF19A0A087WUL8 3843 aa8.16□□□□□ -1.1
TREM1-206ENST00000589882 RELNP78509 3460 aa8.16□□□□□ -1.1
TREM1-206ENST00000589882 M0R2N4 97 aa8.15□□□□□ -1.1
TREM1-206ENST00000589882 COX17Q14061 63 aa8.15□□□□□ -1.1
TREM1-206ENST00000589882 Q6ZRP5 223 aa8.15□□□□□ -1.1
TREM1-206ENST00000589882 SPATA3Q8NHX4 192 aa8.15□□□□□ -1.1
TREM1-206ENST00000589882 LRRK2Q5S007 2527 aa8.15□□□□□ -1.11
TREM1-206ENST00000589882 Q8IZM0 81 aa8.15□□□□□ -1.11
TREM1-206ENST00000589882 A6NDX4 124 aa8.14□□□□□ -1.11
TREM1-206ENST00000589882 DEFB131AP59861 70 aa8.14□□□□□ -1.11
TREM1-206ENST00000589882 UBE2BP63146 152 aa8.14□□□□□ -1.11
TREM1-206ENST00000589882 FBXL19-AS1Q494R0 122 aa8.14□□□□□ -1.11
TREM1-206ENST00000589882 SCXQ7RTU7 201 aa8.14□□□□□ -1.11
TREM1-206ENST00000589882 MED13LQ71F56 2210 aa8.14□□□□□ -1.11
TREM1-206ENST00000589882 IGHV4-31P0DP07 118 aa8.13□□□□□ -1.11
TREM1-206ENST00000589882 TRGV1A0A0A0MS02 117 aa8.13□□□□□ -1.11
TREM1-206ENST00000589882 PRM2P04554 102 aa8.13□□□□□ -1.11
TREM1-206ENST00000589882 CD164L2Q6UWJ8 174 aa8.13□□□□□ -1.11
TREM1-206ENST00000589882 RP1L1Q8IWN7 2480 aaPredicted RBP8.12□□□□□ -1.11
TREM1-206ENST00000589882 CYSRT1A8MQ03 144 aa8.12□□□□□ -1.11
TREM1-206ENST00000589882 KTN1-AS1Q86SY8 53 aa8.12□□□□□ -1.11
TREM1-206ENST00000589882 DOPEY2Q9Y3R5 2298 aa8.12□□□□□ -1.11
TREM1-206ENST00000589882 IGKV3OR2-268A0A0C4DH90 116 aa8.11□□□□□ -1.11
TREM1-206ENST00000589882 IGKV4-1P06312 121 aa8.11□□□□□ -1.11
TREM1-206ENST00000589882 LY6EQ16553 131 aa8.11□□□□□ -1.11
TREM1-206ENST00000589882 HIGD2AQ9BW72 106 aa8.11□□□□□ -1.11
TREM1-206ENST00000589882 NBASA2RRP1 2371 aa8.1□□□□□ -1.11
TREM1-206ENST00000589882 TRAV22A0A0B4J277 110 aa8.1□□□□□ -1.11
TREM1-206ENST00000589882 C1orf64Q8NEQ6 169 aa8.1□□□□□ -1.11
TREM1-206ENST00000589882 LCE6AA0A183 80 aa8.09□□□□□ -1.11
TREM1-206ENST00000589882 H3BUX3 64 aa8.09□□□□□ -1.11
TREM1-206ENST00000589882 COX7BP24311 80 aa8.09□□□□□ -1.11
TREM1-206ENST00000589882 PRR3P79522 188 aaKnown RBP8.09□□□□□ -1.11
TREM1-206ENST00000589882 DEFB114Q30KQ6 69 aa8.09□□□□□ -1.11
TREM1-206ENST00000589882 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.09□□□□□ -1.11
TREM1-206ENST00000589882 Q6ZQY7 126 aa8.09□□□□□ -1.11
TREM1-206ENST00000589882 LINC00959A0A1B0GUT2 108 aa8.08□□□□□ -1.12
TREM1-206ENST00000589882 PSPHP1O15172 72 aa8.08□□□□□ -1.12
TREM1-206ENST00000589882 CYP4F30PQ9H0H9 118 aa8.08□□□□□ -1.12
TREM1-206ENST00000589882 SPTAN1Q13813 2472 aaKnown RBP8.08□□□□□ -1.12
TREM1-206ENST00000589882 USP9YO00507 2555 aaPredicted RBP8.08□□□□□ -1.12
TREM1-206ENST00000589882 USP9XQ93008 2570 aaPredicted RBP8.08□□□□□ -1.12
TREM1-206ENST00000589882 UBE2AP49459 152 aa8.07□□□□□ -1.12
TREM1-206ENST00000589882 IGLV4-60A0A075B6I1 120 aa8.06□□□□□ -1.12
TREM1-206ENST00000589882 NDUFS5O43920 106 aa8.06□□□□□ -1.12
TREM1-206ENST00000589882 TACC2O95359 2948 aa8.06□□□□□ -1.12
TREM1-206ENST00000589882 CCL24O00175 119 aa8.06□□□□□ -1.12
TREM1-206ENST00000589882 BRD3OSQ6XYD6 125 aa8.06□□□□□ -1.12
TREM1-206ENST00000589882 RBM12B-AS1Q9P1G2 102 aa8.06□□□□□ -1.12
TREM1-206ENST00000589882 TEX15Q9BXT5 2789 aa8.05□□□□□ -1.12
TREM1-206ENST00000589882 TRBV6-8A0A0A6YYG3 113 aa8.05□□□□□ -1.12
TREM1-206ENST00000589882 IGHV4-30-2A0A087WSY4 118 aa8.04□□□□□ -1.12
TREM1-206ENST00000589882 SYCNQ0VAF6 134 aa8.04□□□□□ -1.12
TREM1-206ENST00000589882 STHQ8IWL8 128 aa8.04□□□□□ -1.12
TREM1-206ENST00000589882 LINC00588Q9Y4M8 146 aa8.04□□□□□ -1.12
TREM1-206ENST00000589882 SPTBN1Q01082 2364 aaKnown RBP8.04□□□□□ -1.12
TREM1-206ENST00000589882 IGHV4-28A0A0C4DH34 117 aa8.04□□□□□ -1.12
TREM1-206ENST00000589882 IGLV6-57P01721 117 aa8.04□□□□□ -1.12
TREM1-206ENST00000589882 GRNP28799 593 aaKnown RBP8.04□□□□□ -1.12
TREM1-206ENST00000589882 MAP6D1Q9H9H5 199 aa8.04□□□□□ -1.12
TREM1-206ENST00000589882 UTP20O75691 2785 aaKnown RBP8.04□□□□□ -1.12
TREM1-206ENST00000589882 PSCAO43653 123 aa8.03□□□□□ -1.12
TREM1-206ENST00000589882 UNC79Q9P2D8 2635 aa8.03□□□□□ -1.12
TREM1-206ENST00000589882 TRGV2A0A075B6R0 118 aa8.02□□□□□ -1.12
TREM1-206ENST00000589882 LRCOL1A6NCL2 159 aa8.02□□□□□ -1.12
TREM1-206ENST00000589882 LINC01006Q8NI28 216 aa8.02□□□□□ -1.12
TREM1-206ENST00000589882 DIRC1Q969H9 104 aa8.02□□□□□ -1.12
TREM1-206ENST00000589882 NDUFB1O75438 58 aa8.02□□□□□ -1.13
TREM1-206ENST00000589882 ZCCHC13Q8WW36 166 aaKnown RBP8.02□□□□□ -1.13
TREM1-206ENST00000589882 PCNX1Q96RV3 2341 aa8.01□□□□□ -1.13
TREM1-206ENST00000589882 IGHV4-59P01825 116 aa8.01□□□□□ -1.13
TREM1-206ENST00000589882 Q8N9L7 120 aa8.01□□□□□ -1.13
TREM1-206ENST00000589882 NOTCH2Q04721 2471 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms