RNA–Protein interactions for RNA: ENST00000589882.1

TREM1-206, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

Gene TREM1, Length 1,876 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-206ENST00000589882 NISCHQ9Y2I1 1504 aa20.81■□□□□ 0.92
TREM1-206ENST00000589882 PELP1Q8IZL8 1130 aaKnown RBP20.43■□□□□ 0.86
TREM1-206ENST00000589882 HRCP23327 699 aa20.05■□□□□ 0.8
TREM1-206ENST00000589882 MYT1Q01538 1121 aa19.92■□□□□ 0.78
TREM1-206ENST00000589882 PPARGC1BQ86YN6 1023 aaKnown RBP19.26■□□□□ 0.67
TREM1-206ENST00000589882 PCGF6Q9BYE7 350 aa19.18■□□□□ 0.66
TREM1-206ENST00000589882 SCAF1Q9H7N4 1312 aaKnown RBP19.09■□□□□ 0.65
TREM1-206ENST00000589882 DCAF1Q9Y4B6 1507 aa18.93■□□□□ 0.62
TREM1-206ENST00000589882 TTBK1Q5TCY1 1321 aaPredicted RBP18.9■□□□□ 0.62
TREM1-206ENST00000589882 MYO15BQ96JP2 1530 aa18.9■□□□□ 0.62
TREM1-206ENST00000589882 ZEB1P37275 1124 aaPredicted RBP18.9■□□□□ 0.62
TREM1-206ENST00000589882 CCDC180Q9P1Z9 1646 aa18.79■□□□□ 0.6
TREM1-206ENST00000589882 TRIM26Q12899 539 aaPredicted RBP18.67■□□□□ 0.58
TREM1-206ENST00000589882 CHIC1Q5VXU3 224 aa18.66■□□□□ 0.58
TREM1-206ENST00000589882 SUPT5HO00267 1087 aaKnown RBP18.62■□□□□ 0.57
TREM1-206ENST00000589882 ACIN1Q9UKV3 1341 aaKnown RBP18.61■□□□□ 0.57
TREM1-206ENST00000589882 ABCC9O60706 1549 aa18.49■□□□□ 0.55
TREM1-206ENST00000589882 CENPBP07199 599 aaPredicted RBP18.45■□□□□ 0.54
TREM1-206ENST00000589882 SHROOM4Q9ULL8 1493 aa18.44■□□□□ 0.54
TREM1-206ENST00000589882 NEUROD1Q13562 356 aa18.38■□□□□ 0.53
TREM1-206ENST00000589882 GTF3C3Q9Y5Q9 886 aa18.37■□□□□ 0.53
TREM1-206ENST00000589882 BCL11AQ9H165 835 aa18.1■□□□□ 0.49
TREM1-206ENST00000589882 LOC105371045A0A1W2PR82 267 aa18.07■□□□□ 0.48
TREM1-206ENST00000589882 DIEXFQ68CQ4 756 aaKnown RBP17.98■□□□□ 0.47
TREM1-206ENST00000589882 ANP32EQ9BTT0 268 aa17.88■□□□□ 0.45
TREM1-206ENST00000589882 FAM9AQ8IZU1 332 aaPredicted RBP17.86■□□□□ 0.45
TREM1-206ENST00000589882 ZCCHC6Q5VYS8 1495 aaKnown RBP17.84■□□□□ 0.45
TREM1-206ENST00000589882 CLSPNQ9HAW4 1339 aa17.81■□□□□ 0.44
TREM1-206ENST00000589882 PRKCSHP14314 528 aaPredicted RBP17.73■□□□□ 0.43
TREM1-206ENST00000589882 ERICH6Q7L0X2 663 aa17.71■□□□□ 0.43
TREM1-206ENST00000589882 CCER1Q8TC90 406 aaPredicted RBP17.71■□□□□ 0.43
TREM1-206ENST00000589882 TRIM41Q8WV44 630 aa17.71■□□□□ 0.43
TREM1-206ENST00000589882 RB1CC1Q8TDY2 1594 aa17.63■□□□□ 0.41
TREM1-206ENST00000589882 ZNF316A6NFI3 1004 aaPredicted RBP17.58■□□□□ 0.4
TREM1-206ENST00000589882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.56■□□□□ 0.4
TREM1-206ENST00000589882 YTHDC1Q96MU7 727 aaKnown RBP17.54■□□□□ 0.4
TREM1-206ENST00000589882 CSRNP3Q8WYN3 585 aa17.53■□□□□ 0.4
TREM1-206ENST00000589882 NACADO15069 1562 aa17.49■□□□□ 0.39
TREM1-206ENST00000589882 TSHZ2Q9NRE2 1034 aa17.48■□□□□ 0.39
TREM1-206ENST00000589882 SUPT16HQ9Y5B9 1047 aaKnown RBP17.43■□□□□ 0.38
TREM1-206ENST00000589882 MIER1Q8N108 512 aa17.38■□□□□ 0.37
TREM1-206ENST00000589882 APLP2Q06481 763 aa17.37■□□□□ 0.37
TREM1-206ENST00000589882 DNAJC5BQ9UF47 199 aa17.37■□□□□ 0.37
TREM1-206ENST00000589882 UNC13AQ9UPW8 1703 aa17.28■□□□□ 0.36
TREM1-206ENST00000589882 MYT1LQ9UL68 1186 aa17.21■□□□□ 0.35
TREM1-206ENST00000589882 DCAF8L2P0C7V8 631 aa17.17■□□□□ 0.34
TREM1-206ENST00000589882 BICRAQ9NZM4 1560 aa17.14■□□□□ 0.33
TREM1-206ENST00000589882 PABPN1Q86U42 306 aaKnown RBP eCLIP17.14■□□□□ 0.33
TREM1-206ENST00000589882 WRNQ14191 1432 aaPredicted RBP eCLIP17.13■□□□□ 0.33
TREM1-206ENST00000589882 RBM19Q9Y4C8 960 aaKnown RBP17.03■□□□□ 0.32
TREM1-206ENST00000589882 ERICH6BQ5W0A0 696 aa16.93■□□□□ 0.3
TREM1-206ENST00000589882 FANCIQ9NVI1 1328 aa16.93■□□□□ 0.3
TREM1-206ENST00000589882 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
TREM1-206ENST00000589882 RSF1Q96T23 1441 aaPredicted RBP16.87■□□□□ 0.29
TREM1-206ENST00000589882 NEFLP07196 543 aa16.86■□□□□ 0.29
TREM1-206ENST00000589882 MSH5O43196 834 aa16.84■□□□□ 0.29
TREM1-206ENST00000589882 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
TREM1-206ENST00000589882 FKBP8Q14318 412 aa16.82■□□□□ 0.28
TREM1-206ENST00000589882 DEKP35659 375 aaKnown RBP16.81■□□□□ 0.28
TREM1-206ENST00000589882 BCANQ96GW7 911 aa16.79■□□□□ 0.28
TREM1-206ENST00000589882 ANO8Q9HCE9 1232 aaPredicted RBP16.78■□□□□ 0.28
TREM1-206ENST00000589882 CEP162Q5TB80 1403 aa16.77■□□□□ 0.28
TREM1-206ENST00000589882 CC2D2AQ9P2K1 1620 aa16.75■□□□□ 0.27
TREM1-206ENST00000589882 UBE2Q2Q8WVN8 375 aa16.74■□□□□ 0.27
TREM1-206ENST00000589882 EIF4G1Q04637 1599 aaKnown RBP16.71■□□□□ 0.27
TREM1-206ENST00000589882 TNIKQ9UKE5 1360 aa16.7■□□□□ 0.26
TREM1-206ENST00000589882 CECR2Q9BXF3 1484 aa16.68■□□□□ 0.26
TREM1-206ENST00000589882 CDK11AQ9UQ88 783 aaPredicted RBP16.65■□□□□ 0.26
TREM1-206ENST00000589882 HNRNPUL2Q1KMD3 747 aaKnown RBP16.6■□□□□ 0.25
TREM1-206ENST00000589882 SALL2Q9Y467 1007 aaPredicted RBP16.6■□□□□ 0.25
TREM1-206ENST00000589882 AEBP2Q6ZN18 517 aaPredicted RBP16.57■□□□□ 0.24
TREM1-206ENST00000589882 EEA1Q15075 1411 aa16.54■□□□□ 0.24
TREM1-206ENST00000589882 ITGAEP38570 1179 aa16.54■□□□□ 0.24
TREM1-206ENST00000589882 DHX57Q6P158 1386 aaKnown RBP16.5■□□□□ 0.23
TREM1-206ENST00000589882 NOP58Q9Y2X3 529 aaKnown RBP16.47■□□□□ 0.23
TREM1-206ENST00000589882 CCER2I3L3R5 266 aa16.45■□□□□ 0.22
TREM1-206ENST00000589882 RTL5Q5HYW3 569 aaPredicted RBP16.44■□□□□ 0.22
TREM1-206ENST00000589882 KCNH8Q96L42 1107 aa16.44■□□□□ 0.22
TREM1-206ENST00000589882 GOLGA3Q08378 1498 aa16.42■□□□□ 0.22
TREM1-206ENST00000589882 CCDC136Q96JN2 1154 aa16.41■□□□□ 0.22
TREM1-206ENST00000589882 NBR1Q14596 966 aa16.35■□□□□ 0.21
TREM1-206ENST00000589882 UBTFP17480 764 aaKnown RBP16.35■□□□□ 0.21
TREM1-206ENST00000589882 VPS8Q8N3P4 1428 aa16.33■□□□□ 0.2
TREM1-206ENST00000589882 EIF5BO60841 1220 aaKnown RBP16.32■□□□□ 0.2
TREM1-206ENST00000589882 PPP4R2Q9NY27 417 aa16.32■□□□□ 0.2
TREM1-206ENST00000589882 ABCC8Q09428 1581 aa16.3■□□□□ 0.2
TREM1-206ENST00000589882 IL27Q8NEV9 243 aa16.3■□□□□ 0.2
TREM1-206ENST00000589882 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
TREM1-206ENST00000589882 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.28■□□□□ 0.2
TREM1-206ENST00000589882 ANP32CO43423 234 aa16.27■□□□□ 0.2
TREM1-206ENST00000589882 CUX2O14529 1486 aa16.27■□□□□ 0.2
TREM1-206ENST00000589882 C11orf95C9JLR9 678 aaPredicted RBP16.27■□□□□ 0.19
TREM1-206ENST00000589882 TRIM52Q96A61 297 aa16.27■□□□□ 0.19
TREM1-206ENST00000589882 PKNOX2Q96KN3 472 aa16.27■□□□□ 0.19
TREM1-206ENST00000589882 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
TREM1-206ENST00000589882 CLIP1P30622 1438 aa16.25■□□□□ 0.19
TREM1-206ENST00000589882 SOGA1O94964 1423 aa16.24■□□□□ 0.19
TREM1-206ENST00000589882 ANP32AP39687 249 aaKnown RBP16.24■□□□□ 0.19
TREM1-206ENST00000589882 PPP1R15AO75807 674 aaPredicted RBP16.23■□□□□ 0.19
TREM1-206ENST00000589882 USP35Q9P2H5 1018 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms