RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ZNF815PA8K554 130 aa6.42□□□□□ -1.38
GNE-206ENST00000543356 OXTP01178 125 aa6.42□□□□□ -1.38
GNE-206ENST00000543356 B9D2Q9BPU9 175 aa6.42□□□□□ -1.38
GNE-206ENST00000543356 CDKN2A-AS1Q9UH64 79 aa6.42□□□□□ -1.38
GNE-206ENST00000543356 NBEAL1Q6ZS30 2694 aa6.41□□□□□ -1.38
GNE-206ENST00000543356 TRAV10A0A0B4J240 114 aa6.41□□□□□ -1.38
GNE-206ENST00000543356 LGALS3P17931 250 aaKnown RBP6.41□□□□□ -1.38
GNE-206ENST00000543356 COX6A2Q02221 97 aa6.41□□□□□ -1.38
GNE-206ENST00000543356 LYPD5Q6UWN5 251 aa6.41□□□□□ -1.38
GNE-206ENST00000543356 NOTCH1P46531 2555 aa6.41□□□□□ -1.38
GNE-206ENST00000543356 IGHV3-30-3P0DP02 117 aa6.4□□□□□ -1.38
GNE-206ENST00000543356 C6orf226Q5I0X4 101 aa6.4□□□□□ -1.38
GNE-206ENST00000543356 C10orf126Q8N4M7 172 aa6.4□□□□□ -1.38
GNE-206ENST00000543356 IGHV3-64A0A075B6Q5 118 aa6.4□□□□□ -1.39
GNE-206ENST00000543356 FAM236AA0A1B0GUQ0 79 aa6.4□□□□□ -1.39
GNE-206ENST00000543356 FAM236BA0A1B0GV22 79 aa6.4□□□□□ -1.39
GNE-206ENST00000543356 C3orf22Q8N5N4 141 aa6.4□□□□□ -1.39
GNE-206ENST00000543356 HUWE1Q7Z6Z7 4374 aaKnown RBP6.39□□□□□ -1.39
GNE-206ENST00000543356 TENM3Q9P273 2699 aa6.39□□□□□ -1.39
GNE-206ENST00000543356 TRAV8-3A0A0A6YYJ7 113 aa6.39□□□□□ -1.39
GNE-206ENST00000543356 IGLV5-39A0A0G2JS06 123 aa6.39□□□□□ -1.39
GNE-206ENST00000543356 LINC00959A0A1B0GUT2 108 aa6.39□□□□□ -1.39
GNE-206ENST00000543356 SCGB1C2P0DMR2 95 aa6.39□□□□□ -1.39
GNE-206ENST00000543356 Q5XG85 94 aa6.39□□□□□ -1.39
GNE-206ENST00000543356 NTN5Q8WTR8 489 aaPredicted RBP6.39□□□□□ -1.39
GNE-206ENST00000543356 SLC25A20O43772 301 aa6.39□□□□□ -1.39
GNE-206ENST00000543356 RPS28P62857 69 aaKnown RBP6.39□□□□□ -1.39
GNE-206ENST00000543356 SMIM1B2RUZ4 78 aa6.38□□□□□ -1.39
GNE-206ENST00000543356 TRAV8-4A0A0B4J246 113 aa6.38□□□□□ -1.39
GNE-206ENST00000543356 SS18Q15532 418 aa6.38□□□□□ -1.39
GNE-206ENST00000543356 SCGB1D4Q6XE38 83 aa6.38□□□□□ -1.39
GNE-206ENST00000543356 CYSTM1Q9H1C7 97 aa6.38□□□□□ -1.39
GNE-206ENST00000543356 MGAM2Q2M2H8 2515 aa6.38□□□□□ -1.39
GNE-206ENST00000543356 IGKV3OR2-268A0A0C4DH90 116 aa6.37□□□□□ -1.39
GNE-206ENST00000543356 TEX49A0A1B0GTD5 131 aa6.37□□□□□ -1.39
GNE-206ENST00000543356 V9GYY9 64 aa6.37□□□□□ -1.39
GNE-206ENST00000543356 IGHV3OR16-9A0A0B4J2B5 98 aa6.37□□□□□ -1.39
GNE-206ENST00000543356 LINC00526Q96FQ7 95 aa6.37□□□□□ -1.39
GNE-206ENST00000543356 ANGP03950 147 aaKnown RBP6.36□□□□□ -1.39
GNE-206ENST00000543356 LINC00269Q8N2A0 174 aa6.36□□□□□ -1.39
GNE-206ENST00000543356 Q8N3U1 123 aa6.36□□□□□ -1.39
GNE-206ENST00000543356 A0A087WZ39 114 aa6.36□□□□□ -1.39
GNE-206ENST00000543356 TRBV7-7A0A0K0K1E9 115 aa6.36□□□□□ -1.39
GNE-206ENST00000543356 NDUFA1O15239 70 aa6.36□□□□□ -1.39
GNE-206ENST00000543356 REG3AQ06141 175 aa6.36□□□□□ -1.39
GNE-206ENST00000543356 ESRGQ1W209 222 aa6.36□□□□□ -1.39
GNE-206ENST00000543356 LINC01561Q8N1V8 128 aa6.36□□□□□ -1.39
GNE-206ENST00000543356 NDUFA12Q9UI09 145 aa6.36□□□□□ -1.39
GNE-206ENST00000543356 PRR34Q9NV39 138 aa6.35□□□□□ -1.39
GNE-206ENST00000543356 A0A0J9YXY3 114 aa6.35□□□□□ -1.39
GNE-206ENST00000543356 UQCRQO14949 82 aa6.35□□□□□ -1.39
GNE-206ENST00000543356 CLPSL2Q6UWE3 100 aa6.35□□□□□ -1.39
GNE-206ENST00000543356 WFDC10BQ8IUB3 73 aa6.35□□□□□ -1.39
GNE-206ENST00000543356 DPH3Q96FX2 82 aa6.34□□□□□ -1.39
GNE-206ENST00000543356 DNAH9Q9NYC9 4486 aa6.34□□□□□ -1.39
GNE-206ENST00000543356 XCL1P47992 114 aa6.34□□□□□ -1.39
GNE-206ENST00000543356 LYRM7Q5U5X0 104 aa6.34□□□□□ -1.39
GNE-206ENST00000543356 CD164L2Q6UWJ8 174 aa6.34□□□□□ -1.39
GNE-206ENST00000543356 GAGE2AQ6NT46 116 aa6.33□□□□□ -1.4
GNE-206ENST00000543356 TIMM17BO60830 172 aa6.33□□□□□ -1.4
GNE-206ENST00000543356 COX7B2Q8TF08 81 aa6.33□□□□□ -1.4
GNE-206ENST00000543356 CHCHD10Q8WYQ3 142 aaPredicted RBP6.33□□□□□ -1.4
GNE-206ENST00000543356 IGHV3-30P01768 117 aa6.32□□□□□ -1.4
GNE-206ENST00000543356 IGHV3-33P01772 117 aa6.32□□□□□ -1.4
GNE-206ENST00000543356 IGHV3-30-5P0DP03 117 aa6.32□□□□□ -1.4
GNE-206ENST00000543356 RPL13AP40429 203 aaKnown RBP6.32□□□□□ -1.4
GNE-206ENST00000543356 LINC01556Q5JQF7 62 aa6.32□□□□□ -1.4
GNE-206ENST00000543356 ZNF625Q96I27 306 aaPredicted RBP6.32□□□□□ -1.4
GNE-206ENST00000543356 DSCR8Q96T75 97 aa6.32□□□□□ -1.4
GNE-206ENST00000543356 LITAFQ99732 161 aa6.32□□□□□ -1.4
GNE-206ENST00000543356 KLK12Q9UKR0 248 aa6.32□□□□□ -1.4
GNE-206ENST00000543356 ENHOQ6UWT2 76 aa6.32□□□□□ -1.4
GNE-206ENST00000543356 C5orf38Q86SI9 138 aa6.32□□□□□ -1.4
GNE-206ENST00000543356 C2orf48Q96LS8 159 aa6.32□□□□□ -1.4
GNE-206ENST00000543356 Q9H8V8 135 aa6.32□□□□□ -1.4
GNE-206ENST00000543356 hADV29S1A0JD25 119 aa6.31□□□□□ -1.4
GNE-206ENST00000543356 COX7A2LO14548 114 aa6.31□□□□□ -1.4
GNE-206ENST00000543356 CRPP02741 224 aa6.31□□□□□ -1.4
GNE-206ENST00000543356 SPANXDQ9BXN6 97 aa6.31□□□□□ -1.4
GNE-206ENST00000543356 SPANXCQ9NY87 97 aa6.31□□□□□ -1.4
GNE-206ENST00000543356 PKIGQ9Y2B9 76 aa6.31□□□□□ -1.4
GNE-206ENST00000543356 CFC1BP0CG36 223 aa6.31□□□□□ -1.4
GNE-206ENST00000543356 CFC1P0CG37 223 aa6.31□□□□□ -1.4
GNE-206ENST00000543356 DNAH10OSP0CZ25 163 aa6.31□□□□□ -1.4
GNE-206ENST00000543356 MALP21145 153 aa6.3□□□□□ -1.4
GNE-206ENST00000543356 MIAQ16674 131 aa6.3□□□□□ -1.4
GNE-206ENST00000543356 PRO0628Q9UI54 55 aa6.3□□□□□ -1.4
GNE-206ENST00000543356 IGLV10-54A0A075B6I4 117 aa6.3□□□□□ -1.4
GNE-206ENST00000543356 EIF4EBP3O60516 100 aaPredicted RBP6.3□□□□□ -1.4
GNE-206ENST00000543356 CRYGAP11844 174 aa6.3□□□□□ -1.4
GNE-206ENST00000543356 COX7CP15954 63 aa6.3□□□□□ -1.4
GNE-206ENST00000543356 CCL18P55774 89 aa6.3□□□□□ -1.4
GNE-206ENST00000543356 LINC00336Q6ZUF6 198 aa6.3□□□□□ -1.4
GNE-206ENST00000543356 Q8IZM0 81 aa6.3□□□□□ -1.4
GNE-206ENST00000543356 UBE2WQ96B02 151 aa6.3□□□□□ -1.4
GNE-206ENST00000543356 LINC00588Q9Y4M8 146 aa6.3□□□□□ -1.4
GNE-206ENST00000543356 DNHD1Q96M86 4753 aa6.3□□□□□ -1.4
GNE-206ENST00000543356 UPK3BQ9BT76 320 aa6.29□□□□□ -1.4
GNE-206ENST00000543356 CIRBPQ14011 172 aaKnown RBP6.29□□□□□ -1.4
GNE-206ENST00000543356 LINC01620Q4KN68 170 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms