RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 UQCR11O14957 56 aa1.53□□□□□ -2.16
TRAPPC13-205ENST00000504243 MGPP08493 103 aa1.53□□□□□ -2.16
TRAPPC13-205ENST00000504243 C3orf79P0CE67 100 aa1.53□□□□□ -2.16
TRAPPC13-205ENST00000504243 SPTBP11277 2137 aa1.53□□□□□ -2.16
TRAPPC13-205ENST00000504243 PDCD11Q14690 1871 aaKnown RBP1.53□□□□□ -2.16
TRAPPC13-205ENST00000504243 ATXN8Q156A1 80 aa1.53□□□□□ -2.16
TRAPPC13-205ENST00000504243 C1orf167Q5SNV9 1468 aa1.53□□□□□ -2.16
TRAPPC13-205ENST00000504243 EHBP1L1Q8N3D4 1523 aa1.53□□□□□ -2.16
TRAPPC13-205ENST00000504243 WFDC10AQ9H1F0 79 aa1.53□□□□□ -2.16
TRAPPC13-205ENST00000504243 CELSR3Q9NYQ7 3312 aa1.53□□□□□ -2.16
TRAPPC13-205ENST00000504243 MKI67P46013 3256 aaKnown RBP1.53□□□□□ -2.17
TRAPPC13-205ENST00000504243 SPTBN4Q9H254 2564 aa1.53□□□□□ -2.17
TRAPPC13-205ENST00000504243 BTAF1O14981 1849 aa1.52□□□□□ -2.17
TRAPPC13-205ENST00000504243 KDM3BQ7LBC6 1761 aa1.52□□□□□ -2.17
TRAPPC13-205ENST00000504243 NESP48681 1621 aa1.52□□□□□ -2.17
TRAPPC13-205ENST00000504243 PHRF1Q9P1Y6 1649 aaKnown RBP1.52□□□□□ -2.17
TRAPPC13-205ENST00000504243 ASXL1Q8IXJ9 1541 aa1.52□□□□□ -2.17
TRAPPC13-205ENST00000504243 CTXND1A0A1B0GTU2 59 aa1.52□□□□□ -2.17
TRAPPC13-205ENST00000504243 NDUFB1O75438 58 aa1.52□□□□□ -2.17
TRAPPC13-205ENST00000504243 HMGA1P17096 107 aaKnown RBP1.52□□□□□ -2.17
TRAPPC13-205ENST00000504243 COX17Q14061 63 aa1.52□□□□□ -2.17
TRAPPC13-205ENST00000504243 SMIM4Q8WVI0 70 aa1.52□□□□□ -2.17
TRAPPC13-205ENST00000504243 PRR15LQ9BU68 103 aa1.52□□□□□ -2.17
TRAPPC13-205ENST00000504243 LINC00846Q9NV44 126 aa1.52□□□□□ -2.17
TRAPPC13-205ENST00000504243 LINC01558Q9Y6Z2 57 aa1.52□□□□□ -2.17
TRAPPC13-205ENST00000504243 MED12Q93074 2177 aa1.52□□□□□ -2.17
TRAPPC13-205ENST00000504243 ESPL1Q14674 2120 aa1.52□□□□□ -2.17
TRAPPC13-205ENST00000504243 WDFY4Q6ZS81 3184 aa1.52□□□□□ -2.17
TRAPPC13-205ENST00000504243 NRXN2Q9P2S2 1712 aa1.52□□□□□ -2.17
TRAPPC13-205ENST00000504243 CTTNBP2Q8WZ74 1663 aa1.51□□□□□ -2.17
TRAPPC13-205ENST00000504243 ABCA6Q8N139 1617 aa1.51□□□□□ -2.17
TRAPPC13-205ENST00000504243 RAPGEF6Q8TEU7 1601 aa1.51□□□□□ -2.17
TRAPPC13-205ENST00000504243 RNF17Q9BXT8 1623 aaKnown RBP1.51□□□□□ -2.17
TRAPPC13-205ENST00000504243 CDK13Q14004 1512 aaKnown RBP1.51□□□□□ -2.17
TRAPPC13-205ENST00000504243 RANBP2P49792 3224 aaKnown RBP1.51□□□□□ -2.17
TRAPPC13-205ENST00000504243 A0A1B0GUT8 65 aa1.51□□□□□ -2.17
TRAPPC13-205ENST00000504243 IGLV3-1P01715 115 aa1.51□□□□□ -2.17
TRAPPC13-205ENST00000504243 CCL18P55774 89 aa1.51□□□□□ -2.17
TRAPPC13-205ENST00000504243 LINC00322Q6ZN03 302 aaPredicted RBP1.51□□□□□ -2.17
TRAPPC13-205ENST00000504243 DEFB132Q7Z7B7 95 aa1.51□□□□□ -2.17
TRAPPC13-205ENST00000504243 UBE2D4Q9Y2X8 147 aa1.51□□□□□ -2.17
TRAPPC13-205ENST00000504243 TTC28Q96AY4 2481 aa1.51□□□□□ -2.17
TRAPPC13-205ENST00000504243 MAP2P11137 1827 aaKnown RBP1.51□□□□□ -2.17
TRAPPC13-205ENST00000504243 LAMA4Q16363 1823 aa1.51□□□□□ -2.17
TRAPPC13-205ENST00000504243 UBR1Q8IWV7 1749 aa1.51□□□□□ -2.17
TRAPPC13-205ENST00000504243 MYOM1P52179 1685 aa1.51□□□□□ -2.17
TRAPPC13-205ENST00000504243 COL4A6Q14031 1691 aa1.51□□□□□ -2.17
TRAPPC13-205ENST00000504243 CFAP46Q8IYW2 2715 aa1.51□□□□□ -2.17
TRAPPC13-205ENST00000504243 ARFGEF2Q9Y6D5 1785 aa1.5□□□□□ -2.17
TRAPPC13-205ENST00000504243 FXYD6-FXYD2A0A087WZ82 144 aa1.5□□□□□ -2.17
TRAPPC13-205ENST00000504243 CLPSL1A2RUU4 121 aa1.5□□□□□ -2.17
TRAPPC13-205ENST00000504243 M0R135 149 aa1.5□□□□□ -2.17
TRAPPC13-205ENST00000504243 INE1O15225 51 aa1.5□□□□□ -2.17
TRAPPC13-205ENST00000504243 SPINT3P49223 89 aa1.5□□□□□ -2.17
TRAPPC13-205ENST00000504243 RPL37AP61513 92 aaKnown RBP1.5□□□□□ -2.17
TRAPPC13-205ENST00000504243 FXYD6Q9H0Q3 95 aa1.5□□□□□ -2.17
TRAPPC13-205ENST00000504243 HILPDAQ9Y5L2 63 aa1.5□□□□□ -2.17
TRAPPC13-205ENST00000504243 ADGRB2O60241 1585 aa1.5□□□□□ -2.17
TRAPPC13-205ENST00000504243 MRC1P22897 1456 aa1.5□□□□□ -2.17
TRAPPC13-205ENST00000504243 ALPK2Q86TB3 2170 aa1.49□□□□□ -2.17
TRAPPC13-205ENST00000504243 MYO7BQ6PIF6 2116 aa1.49□□□□□ -2.17
TRAPPC13-205ENST00000504243 CFAP43Q8NDM7 1665 aa1.49□□□□□ -2.17
TRAPPC13-205ENST00000504243 NOTCH1P46531 2555 aa1.49□□□□□ -2.17
TRAPPC13-205ENST00000504243 M0R2N4 97 aa1.49□□□□□ -2.17
TRAPPC13-205ENST00000504243 FAM103A1Q9BTL3 118 aaKnown RBP1.49□□□□□ -2.17
TRAPPC13-205ENST00000504243 KRTAP4-1Q9BYQ7 146 aa1.49□□□□□ -2.17
TRAPPC13-205ENST00000504243 UNC13CQ8NB66 2214 aa1.49□□□□□ -2.17
TRAPPC13-205ENST00000504243 ANKHD1Q8IWZ3 2542 aaKnown RBP1.49□□□□□ -2.17
TRAPPC13-205ENST00000504243 NBEAL2Q6ZNJ1 2754 aa1.49□□□□□ -2.17
TRAPPC13-205ENST00000504243 CLASP1Q7Z460 1538 aa1.49□□□□□ -2.17
TRAPPC13-205ENST00000504243 ZDBF2Q9HCK1 2354 aa1.49□□□□□ -2.17
TRAPPC13-205ENST00000504243 DLEC1Q9Y238 1755 aa1.49□□□□□ -2.17
TRAPPC13-205ENST00000504243 RALGAPBQ86X10 1494 aa1.49□□□□□ -2.17
TRAPPC13-205ENST00000504243 MYO7AQ13402 2215 aa1.48□□□□□ -2.17
TRAPPC13-205ENST00000504243 PIK3C2BO00750 1634 aa1.48□□□□□ -2.17
TRAPPC13-205ENST00000504243 LOC110117498A0A087WWA1 95 aa1.48□□□□□ -2.17
TRAPPC13-205ENST00000504243 M0R3E3 92 aa1.48□□□□□ -2.17
TRAPPC13-205ENST00000504243 WFDC6Q9BQY6 131 aa1.48□□□□□ -2.17
TRAPPC13-205ENST00000504243 A0A1B0GUL6 1792 aa1.48□□□□□ -2.17
TRAPPC13-205ENST00000504243 ZFHX3Q15911 3703 aa1.48□□□□□ -2.17
TRAPPC13-205ENST00000504243 XRN1Q8IZH2 1706 aaKnown RBP1.48□□□□□ -2.17
TRAPPC13-205ENST00000504243 PRXQ9BXM0 1461 aa1.48□□□□□ -2.17
TRAPPC13-205ENST00000504243 PLCH1Q4KWH8 1693 aa1.48□□□□□ -2.17
TRAPPC13-205ENST00000504243 PREX1Q8TCU6 1659 aa1.48□□□□□ -2.17
TRAPPC13-205ENST00000504243 C2CD3Q4AC94 2353 aa1.48□□□□□ -2.17
TRAPPC13-205ENST00000504243 ANKRD50Q9ULJ7 1429 aa1.48□□□□□ -2.17
TRAPPC13-205ENST00000504243 REV3LO60673 3130 aa1.47□□□□□ -2.17
TRAPPC13-205ENST00000504243 CEP250Q9BV73 2442 aa1.47□□□□□ -2.17
TRAPPC13-205ENST00000504243 DNAH12Q6ZR08 3092 aa1.47□□□□□ -2.17
TRAPPC13-205ENST00000504243 VWFP04275 2813 aa1.47□□□□□ -2.17
TRAPPC13-205ENST00000504243 STAB1Q9NY15 2570 aa1.47□□□□□ -2.17
TRAPPC13-205ENST00000504243 FXYD4P59646 89 aa1.47□□□□□ -2.17
TRAPPC13-205ENST00000504243 FXYD3Q14802 87 aa1.47□□□□□ -2.17
TRAPPC13-205ENST00000504243 ATP7BP35670 1465 aa1.47□□□□□ -2.17
TRAPPC13-205ENST00000504243 LAMC1P11047 1609 aa1.47□□□□□ -2.17
TRAPPC13-205ENST00000504243 BRCA2P51587 3418 aa1.47□□□□□ -2.17
TRAPPC13-205ENST00000504243 SIPA1L3O60292 1781 aaPredicted RBP1.47□□□□□ -2.17
TRAPPC13-205ENST00000504243 MAST1Q9Y2H9 1570 aa1.47□□□□□ -2.17
TRAPPC13-205ENST00000504243 MUC3AQ02505 3323 aa1.46□□□□□ -2.17
TRAPPC13-205ENST00000504243 LRRK2Q5S007 2527 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms