RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 FAM135AQ9P2D6 1515 aa-0.4□□□□□ -2.47
CDC40-204ENST00000431461 TNXBP22105 4242 aa-0.4□□□□□ -2.47
CDC40-204ENST00000431461 EDC4Q6P2E9 1401 aaKnown RBP-0.4□□□□□ -2.47
CDC40-204ENST00000431461 ALMS1Q8TCU4 4167 aa-0.4□□□□□ -2.47
CDC40-204ENST00000431461 URB1O60287 2271 aaKnown RBP-0.4□□□□□ -2.47
CDC40-204ENST00000431461 NUP188Q5SRE5 1749 aa-0.41□□□□□ -2.47
CDC40-204ENST00000431461 FAM223BA6NKX1 122 aa-0.41□□□□□ -2.48
CDC40-204ENST00000431461 I3L3M4 83 aa-0.41□□□□□ -2.48
CDC40-204ENST00000431461 GTF2H5Q6ZYL4 71 aa-0.41□□□□□ -2.48
CDC40-204ENST00000431461 DNAJC13O75165 2243 aa-0.41□□□□□ -2.48
CDC40-204ENST00000431461 COL6A3P12111 3177 aa-0.41□□□□□ -2.48
CDC40-204ENST00000431461 HECTD4Q9Y4D8 3996 aa-0.42□□□□□ -2.48
CDC40-204ENST00000431461 CPSF4LA6NMK7 179 aaKnown RBP-0.42□□□□□ -2.48
CDC40-204ENST00000431461 TMEM262E9PQX1 116 aa-0.42□□□□□ -2.48
CDC40-204ENST00000431461 GNG8Q9UK08 70 aa-0.42□□□□□ -2.48
CDC40-204ENST00000431461 BSNQ9UPA5 3926 aa-0.42□□□□□ -2.48
CDC40-204ENST00000431461 PLEKHH2Q8IVE3 1493 aa-0.42□□□□□ -2.48
CDC40-204ENST00000431461 MUC2Q02817 5179 aa-0.43□□□□□ -2.48
CDC40-204ENST00000431461 TENM2Q9NT68 2774 aa-0.43□□□□□ -2.48
CDC40-204ENST00000431461 A0A1B0GU69 56 aa-0.43□□□□□ -2.48
CDC40-204ENST00000431461 CCL22O00626 93 aa-0.43□□□□□ -2.48
CDC40-204ENST00000431461 MPC2O95563 127 aa-0.43□□□□□ -2.48
CDC40-204ENST00000431461 SPRR2AP35326 72 aa-0.43□□□□□ -2.48
CDC40-204ENST00000431461 C2orf88Q9BSF0 95 aa-0.43□□□□□ -2.48
CDC40-204ENST00000431461 TOP2BQ02880 1626 aa-0.43□□□□□ -2.48
CDC40-204ENST00000431461 ATRQ13535 2644 aa-0.43□□□□□ -2.48
CDC40-204ENST00000431461 FAT2Q9NYQ8 4349 aa-0.43□□□□□ -2.48
CDC40-204ENST00000431461 ABCC2Q92887 1545 aa-0.43□□□□□ -2.48
CDC40-204ENST00000431461 LRRC37AA6NMS7 1700 aa-0.44□□□□□ -2.48
CDC40-204ENST00000431461 SETXQ7Z333 2677 aaKnown RBP-0.44□□□□□ -2.48
CDC40-204ENST00000431461 A0A0G2JND7 137 aa-0.44□□□□□ -2.48
CDC40-204ENST00000431461 S100A1P23297 94 aa-0.44□□□□□ -2.48
CDC40-204ENST00000431461 SNCAP37840 140 aa-0.44□□□□□ -2.48
CDC40-204ENST00000431461 APLNQ9ULZ1 77 aa-0.44□□□□□ -2.48
CDC40-204ENST00000431461 ANKRD17O75179 2603 aaKnown RBP-0.44□□□□□ -2.48
CDC40-204ENST00000431461 PDZD2O15018 2839 aa-0.44□□□□□ -2.48
CDC40-204ENST00000431461 SPHKAPQ2M3C7 1700 aa-0.44□□□□□ -2.48
CDC40-204ENST00000431461 PDCD11Q14690 1871 aaKnown RBP-0.45□□□□□ -2.48
CDC40-204ENST00000431461 NLRP1Q9C000 1473 aa-0.45□□□□□ -2.48
CDC40-204ENST00000431461 A0A1B0GV90 55 aa-0.45□□□□□ -2.48
CDC40-204ENST00000431461 C7orf77A4D0Y5 90 aa-0.45□□□□□ -2.48
CDC40-204ENST00000431461 PMCHL1Q16048 86 aa-0.45□□□□□ -2.48
CDC40-204ENST00000431461 KLK9Q2XQG4 91 aa-0.45□□□□□ -2.48
CDC40-204ENST00000431461 DEFB135Q30KP9 77 aa-0.45□□□□□ -2.48
CDC40-204ENST00000431461 C6orf201Q7Z4U5 140 aa-0.45□□□□□ -2.48
CDC40-204ENST00000431461 C9orf62Q8N4C0 152 aa-0.45□□□□□ -2.48
CDC40-204ENST00000431461 CNOT1A5YKK6 2376 aaKnown RBP-0.45□□□□□ -2.48
CDC40-204ENST00000431461 SCN7AQ01118 1682 aa-0.46□□□□□ -2.48
CDC40-204ENST00000431461 PZPP20742 1482 aa-0.46□□□□□ -2.48
CDC40-204ENST00000431461 NKTRP30414 1462 aaKnown RBP-0.46□□□□□ -2.48
CDC40-204ENST00000431461 KIAA1551Q9HCM1 1747 aa-0.46□□□□□ -2.48
CDC40-204ENST00000431461 PAPPA2Q9BXP8 1791 aa-0.46□□□□□ -2.48
CDC40-204ENST00000431461 TRBV25-1A0A075B6N4 114 aa-0.46□□□□□ -2.48
CDC40-204ENST00000431461 TRAV30A0A087WSZ9 112 aa-0.46□□□□□ -2.48
CDC40-204ENST00000431461 H0Y9P7 68 aa-0.46□□□□□ -2.48
CDC40-204ENST00000431461 ARMS2P0C7Q2 107 aa-0.46□□□□□ -2.48
CDC40-204ENST00000431461 HMGN3Q15651 99 aa-0.46□□□□□ -2.48
CDC40-204ENST00000431461 ALKAL2Q6UX46 152 aa-0.46□□□□□ -2.48
CDC40-204ENST00000431461 CLIP1P30622 1438 aa-0.47□□□□□ -2.48
CDC40-204ENST00000431461 STAB2Q8WWQ8 2551 aa-0.47□□□□□ -2.48
CDC40-204ENST00000431461 FMN2Q9NZ56 1722 aa-0.47□□□□□ -2.48
CDC40-204ENST00000431461 C20orf202A1L168 122 aa-0.47□□□□□ -2.48
CDC40-204ENST00000431461 GNGT1P63211 74 aa-0.47□□□□□ -2.48
CDC40-204ENST00000431461 HSD52Q0P140 79 aa-0.47□□□□□ -2.48
CDC40-204ENST00000431461 PSMG4Q5JS54 123 aa-0.47□□□□□ -2.48
CDC40-204ENST00000431461 SFTA2Q6UW10 78 aa-0.47□□□□□ -2.48
CDC40-204ENST00000431461 LCN9Q8WX39 176 aa-0.47□□□□□ -2.48
CDC40-204ENST00000431461 PCNX1Q96RV3 2341 aa-0.47□□□□□ -2.48
CDC40-204ENST00000431461 TOPAZ1Q8N9V7 1692 aa-0.48□□□□□ -2.49
CDC40-204ENST00000431461 UQCRHP07919 91 aa-0.48□□□□□ -2.49
CDC40-204ENST00000431461 CACFD1Q9UGQ2 172 aa-0.48□□□□□ -2.49
CDC40-204ENST00000431461 ZFHX3Q15911 3703 aa-0.49□□□□□ -2.49
CDC40-204ENST00000431461 SHPRHQ149N8 1683 aa-0.49□□□□□ -2.49
CDC40-204ENST00000431461 CHD1O14646 1710 aa-0.49□□□□□ -2.49
CDC40-204ENST00000431461 A0A087WVE0 104 aa-0.49□□□□□ -2.49
CDC40-204ENST00000431461 PSENENQ9NZ42 101 aa-0.49□□□□□ -2.49
CDC40-204ENST00000431461 CDKN2A-AS1Q9UH64 79 aa-0.49□□□□□ -2.49
CDC40-204ENST00000431461 AP4S1Q9Y587 144 aa-0.49□□□□□ -2.49
CDC40-204ENST00000431461 MLH3Q9UHC1 1453 aa-0.49□□□□□ -2.49
CDC40-204ENST00000431461 SPTY2D1-AS1A0A0U1RR47 76 aa-0.5□□□□□ -2.49
CDC40-204ENST00000431461 hADV29S1A0JD25 119 aa-0.5□□□□□ -2.49
CDC40-204ENST00000431461 ATOX1O00244 68 aa-0.5□□□□□ -2.49
CDC40-204ENST00000431461 LINC00032P0C843 101 aa-0.5□□□□□ -2.49
CDC40-204ENST00000431461 H1FX-AS1Q4G0G2 97 aa-0.5□□□□□ -2.49
CDC40-204ENST00000431461 MRPL34Q9BQ48 92 aaKnown RBP-0.5□□□□□ -2.49
CDC40-204ENST00000431461 NBEAL1Q6ZS30 2694 aa-0.5□□□□□ -2.49
CDC40-204ENST00000431461 RAPGEF2Q9Y4G8 1499 aa-0.5□□□□□ -2.49
CDC40-204ENST00000431461 TARBP1Q13395 1621 aaKnown RBP-0.5□□□□□ -2.49
CDC40-204ENST00000431461 ABCC5O15440 1437 aa-0.51□□□□□ -2.49
CDC40-204ENST00000431461 PRDM15P57071 1507 aaPredicted RBP-0.51□□□□□ -2.49
CDC40-204ENST00000431461 NMSQ5H8A3 153 aa-0.51□□□□□ -2.49
CDC40-204ENST00000431461 TRGV9Q99603 122 aa-0.51□□□□□ -2.49
CDC40-204ENST00000431461 ABCA3Q99758 1704 aa-0.52□□□□□ -2.49
CDC40-204ENST00000431461 COL4A6Q14031 1691 aa-0.52□□□□□ -2.49
CDC40-204ENST00000431461 H0YGG7 62 aa-0.52□□□□□ -2.49
CDC40-204ENST00000431461 GNGT2O14610 69 aa-0.52□□□□□ -2.49
CDC40-204ENST00000431461 SPRR2EP22531 72 aa-0.52□□□□□ -2.49
CDC40-204ENST00000431461 DEFB107AQ8IZN7 70 aa-0.52□□□□□ -2.49
CDC40-204ENST00000431461 HIGD1BQ9P298 99 aa-0.52□□□□□ -2.49
CDC40-204ENST00000431461 COL14A1Q05707 1796 aaKnown RBP-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms