RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 UBE2V1Q13404 147 aa5.76□□□□□ -1.49
HMGN1P34-201ENST00000413023 C6orf226Q5I0X4 101 aa5.76□□□□□ -1.49
HMGN1P34-201ENST00000413023 C10orf25Q5T742 122 aa5.76□□□□□ -1.49
HMGN1P34-201ENST00000413023 Q8IZM0 81 aa5.76□□□□□ -1.49
HMGN1P34-201ENST00000413023 MGAM2Q2M2H8 2515 aa5.76□□□□□ -1.49
HMGN1P34-201ENST00000413023 A0A1W2PPM0 123 aa5.75□□□□□ -1.49
HMGN1P34-201ENST00000413023 TSPAN13O95857 204 aa5.75□□□□□ -1.49
HMGN1P34-201ENST00000413023 VAMP3Q15836 100 aa5.75□□□□□ -1.49
HMGN1P34-201ENST00000413023 KRTAP21-3Q3LHN1 58 aa5.75□□□□□ -1.49
HMGN1P34-201ENST00000413023 CASC10Q5T4H9 136 aa5.75□□□□□ -1.49
HMGN1P34-201ENST00000413023 TRAV8-4A0A0B4J246 113 aa5.74□□□□□ -1.49
HMGN1P34-201ENST00000413023 NHLRC4P0CG21 123 aaPredicted RBP5.74□□□□□ -1.49
HMGN1P34-201ENST00000413023 RPL24P83731 157 aaKnown RBP5.74□□□□□ -1.49
HMGN1P34-201ENST00000413023 C9orf116Q5BN46 136 aaPredicted RBP5.74□□□□□ -1.49
HMGN1P34-201ENST00000413023 MEIG1Q5JSS6 88 aa5.74□□□□□ -1.49
HMGN1P34-201ENST00000413023 UNQ6190/PRO20217Q6UXQ8 127 aa5.74□□□□□ -1.49
HMGN1P34-201ENST00000413023 MIR7-3HGQ8N6C7 128 aa5.74□□□□□ -1.49
HMGN1P34-201ENST00000413023 PGPEP1Q9NXJ5 209 aa5.74□□□□□ -1.49
HMGN1P34-201ENST00000413023 PRO1854Q9UHT4 67 aa5.74□□□□□ -1.49
HMGN1P34-201ENST00000413023 DNAH9Q9NYC9 4486 aa5.74□□□□□ -1.49
HMGN1P34-201ENST00000413023 A0A0B4J2C4 111 aa5.73□□□□□ -1.49
HMGN1P34-201ENST00000413023 IBA57-AS1B1ANH7 110 aa5.73□□□□□ -1.49
HMGN1P34-201ENST00000413023 IFITM1P13164 125 aa5.73□□□□□ -1.49
HMGN1P34-201ENST00000413023 MALP21145 153 aa5.73□□□□□ -1.49
HMGN1P34-201ENST00000413023 PFN2P35080 140 aa5.73□□□□□ -1.49
HMGN1P34-201ENST00000413023 CCL18P55774 89 aa5.73□□□□□ -1.49
HMGN1P34-201ENST00000413023 LINC00158P58513 81 aa5.73□□□□□ -1.49
HMGN1P34-201ENST00000413023 CIRBPQ14011 172 aaKnown RBP5.73□□□□□ -1.49
HMGN1P34-201ENST00000413023 SFTA2Q6UW10 78 aa5.73□□□□□ -1.49
HMGN1P34-201ENST00000413023 NTN5Q8WTR8 489 aaPredicted RBP5.73□□□□□ -1.49
HMGN1P34-201ENST00000413023 ERG28Q9UKR5 140 aa5.73□□□□□ -1.49
HMGN1P34-201ENST00000413023 TMEM238LA0A1B0GVL6 79 aa5.72□□□□□ -1.49
HMGN1P34-201ENST00000413023 A6NJY4 79 aa5.72□□□□□ -1.49
HMGN1P34-201ENST00000413023 K7EP34 96 aa5.72□□□□□ -1.49
HMGN1P34-201ENST00000413023 C15orf56Q8N910 161 aa5.72□□□□□ -1.49
HMGN1P34-201ENST00000413023 UPK3BQ9BT76 320 aa5.72□□□□□ -1.49
HMGN1P34-201ENST00000413023 NBEAL1Q6ZS30 2694 aa5.71□□□□□ -1.49
HMGN1P34-201ENST00000413023 IGKV2-28A0A075B6P5 120 aa5.71□□□□□ -1.5
HMGN1P34-201ENST00000413023 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.71□□□□□ -1.5
HMGN1P34-201ENST00000413023 GAGE10A6NGK3 116 aa5.71□□□□□ -1.5
HMGN1P34-201ENST00000413023 IGKV2D-28P01615 120 aa5.71□□□□□ -1.5
HMGN1P34-201ENST00000413023 CRPP02741 224 aa5.71□□□□□ -1.5
HMGN1P34-201ENST00000413023 SPAG11BQ08648 103 aa5.71□□□□□ -1.5
HMGN1P34-201ENST00000413023 HIGD2BQ4VC39 106 aa5.71□□□□□ -1.5
HMGN1P34-201ENST00000413023 Q8NDZ9 215 aa5.71□□□□□ -1.5
HMGN1P34-201ENST00000413023 KRTAP1-5Q9BYS1 174 aa5.71□□□□□ -1.5
HMGN1P34-201ENST00000413023 ANK2Q01484 3957 aa5.71□□□□□ -1.5
HMGN1P34-201ENST00000413023 H7C2G1 150 aa5.7□□□□□ -1.5
HMGN1P34-201ENST00000413023 SLPIP03973 132 aa5.7□□□□□ -1.5
HMGN1P34-201ENST00000413023 CKS1BP61024 79 aa5.7□□□□□ -1.5
HMGN1P34-201ENST00000413023 PRR3P79522 188 aaKnown RBP5.7□□□□□ -1.5
HMGN1P34-201ENST00000413023 CFAP161Q6P656 301 aa5.7□□□□□ -1.5
HMGN1P34-201ENST00000413023 PPDPFQ9H3Y8 114 aa5.7□□□□□ -1.5
HMGN1P34-201ENST00000413023 Q9HAA7 133 aa5.7□□□□□ -1.5
HMGN1P34-201ENST00000413023 C6orf48Q9UBA6 75 aa5.7□□□□□ -1.5
HMGN1P34-201ENST00000413023 SPCS1Q9Y6A9 102 aa5.7□□□□□ -1.5
HMGN1P34-201ENST00000413023 IGKV2D-24A0A075B6R9 120 aa5.69□□□□□ -1.5
HMGN1P34-201ENST00000413023 LOC107984156A0A0G2JMH3 177 aa5.69□□□□□ -1.5
HMGN1P34-201ENST00000413023 FABP2P12104 132 aa5.69□□□□□ -1.5
HMGN1P34-201ENST00000413023 ARL17AQ8IVW1 177 aa5.69□□□□□ -1.5
HMGN1P34-201ENST00000413023 LINC00337Q8N6G1 96 aa5.69□□□□□ -1.5
HMGN1P34-201ENST00000413023 TCL1BO95988 128 aa5.68□□□□□ -1.5
HMGN1P34-201ENST00000413023 LCE2CQ5TA81 110 aa5.68□□□□□ -1.5
HMGN1P34-201ENST00000413023 C1orf43Q9BWL3 253 aa5.68□□□□□ -1.5
HMGN1P34-201ENST00000413023 SND1-IT1Q9HBX3 110 aa5.68□□□□□ -1.5
HMGN1P34-201ENST00000413023 GVQW2A0A096LPI5 108 aaPredicted RBP5.67□□□□□ -1.5
HMGN1P34-201ENST00000413023 TRBV30A0A0K0K1B3 111 aa5.67□□□□□ -1.5
HMGN1P34-201ENST00000413023 TRIAP1O43715 76 aa5.67□□□□□ -1.5
HMGN1P34-201ENST00000413023 CXCL5P42830 114 aa5.67□□□□□ -1.5
HMGN1P34-201ENST00000413023 WFDC2Q14508 124 aa5.67□□□□□ -1.5
HMGN1P34-201ENST00000413023 Q6ZRU5 148 aa5.67□□□□□ -1.5
HMGN1P34-201ENST00000413023 PRO0461Q9UI25 63 aa5.67□□□□□ -1.5
HMGN1P34-201ENST00000413023 H3BMG7 143 aa5.66□□□□□ -1.5
HMGN1P34-201ENST00000413023 RPL13AP40429 203 aaKnown RBP5.66□□□□□ -1.5
HMGN1P34-201ENST00000413023 PSMB2P49721 201 aa5.66□□□□□ -1.5
HMGN1P34-201ENST00000413023 GTF2H5Q6ZYL4 71 aa5.66□□□□□ -1.5
HMGN1P34-201ENST00000413023 COX17Q14061 63 aa5.65□□□□□ -1.5
HMGN1P34-201ENST00000413023 C2orf48Q96LS8 159 aa5.65□□□□□ -1.5
HMGN1P34-201ENST00000413023 NUPR2A6NF83 97 aa5.64□□□□□ -1.51
HMGN1P34-201ENST00000413023 USP17L23D6RBM5 183 aa5.64□□□□□ -1.51
HMGN1P34-201ENST00000413023 ZNF561-AS1K7EIQ3 104 aa5.64□□□□□ -1.51
HMGN1P34-201ENST00000413023 MTURNQ8N3F0 131 aa5.64□□□□□ -1.51
HMGN1P34-201ENST00000413023 CAMK2N2Q96S95 79 aa5.64□□□□□ -1.51
HMGN1P34-201ENST00000413023 DNHD1Q96M86 4753 aa5.63□□□□□ -1.51
HMGN1P34-201ENST00000413023 LECT2O14960 151 aa5.63□□□□□ -1.51
HMGN1P34-201ENST00000413023 SCGB1C2P0DMR2 95 aa5.63□□□□□ -1.51
HMGN1P34-201ENST00000413023 CLEC2BQ92478 149 aa5.63□□□□□ -1.51
HMGN1P34-201ENST00000413023 XAGE1AQ9HD64 81 aa5.63□□□□□ -1.51
HMGN1P34-201ENST00000413023 SYCNQ0VAF6 134 aa5.62□□□□□ -1.51
HMGN1P34-201ENST00000413023 Q1RN00 199 aa5.62□□□□□ -1.51
HMGN1P34-201ENST00000413023 UBE2DNLQ8IWF7 75 aa5.62□□□□□ -1.51
HMGN1P34-201ENST00000413023 SMIM11BQ8TCY0 68 aa5.62□□□□□ -1.51
HMGN1P34-201ENST00000413023 COPS9Q8WXC6 57 aa5.62□□□□□ -1.51
HMGN1P34-201ENST00000413023 TRAV13-2A0A0B4J235 113 aa5.61□□□□□ -1.51
HMGN1P34-201ENST00000413023 NDUFC2O95298 119 aa5.61□□□□□ -1.51
HMGN1P34-201ENST00000413023 RPL28P46779 137 aaKnown RBP5.61□□□□□ -1.51
HMGN1P34-201ENST00000413023 FAM218AQ96MZ4 157 aa5.61□□□□□ -1.51
HMGN1P34-201ENST00000413023 COL7A1Q02388 2944 aa5.61□□□□□ -1.51
HMGN1P34-201ENST00000413023 TRBV20-1A0A075B6N2 111 aa5.6□□□□□ -1.51
HMGN1P34-201ENST00000413023 NBDYA0A0U1RRE5 68 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms