RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Nkx2-8O70584 235 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Il3raP26952 396 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Klre1Q8CJC7 226 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Sh3bgrl3Q91VW3 93 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Rab5aQ9CQD1 215 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Q9CX25 107 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Btbd17Q9DB72 478 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Cxcr6Q9EQ16 351 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Crybb3Q9JJU9 211 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 IcosQ9WVS0 200 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Zfp462B1AWL2 2495 aaKnown RBP6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Tenm3Q9WTS6 2715 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Ighv7-4A0A0A6YXL5 121 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Gm4744D3Z3S5 154 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 P01792 123 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 P01820 115 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Cdx1P18111 268 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 BsgP18572 389 aaKnown RBP6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 MgpP19788 104 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Slc45a2P58355 530 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 SelenotP62342 195 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Ube2l3P68037 154 aaKnown RBP6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 KhkP97328 298 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr275Q7TS18 319 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Slamf7Q8BHK6 333 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Prr9Q8BV84 116 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr1243Q8VGM7 305 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Ythdf2Q91YT7 579 aaKnown RBP6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 TecrQ9CY27 308 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Scp2d1Q9DAH1 156 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Vax2Q9WTP9 292 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 AU041133A0A0J9YVH3 498 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Gm3250E9Q1M3 230 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 P04944 107 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 LalbaP29752 143 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Rom1P32958 351 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Mbd3l2Q3UXB0 228 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Znrf2Q71FD5 238 aa6.8□□□□□ -1.32
Trim39-201ENSMUST00000042717 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 A0A286YCQ8 80 aa6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 Zfp867E9Q2M4 473 aa6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr149Q60888 311 aa6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr1199Q8VF94 310 aa6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 Rbmxl1Q91VM5 388 aaKnown RBP6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 Scgb1b27Q91WB5 92 aa6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 Oxld1Q9CR10 201 aa6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 Wnk1P83741 2377 aa6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 CubnQ9JLB4 3623 aa6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 Ighv1-4A0A075B5T4 117 aa6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 Trav9d-1A0A075B699 112 aa6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr1436A0PK57 315 aa6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 Gm26965M0QWH4 86 aa6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 Foxc2Q61850 494 aa6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 Samd10Q7TST3 202 aa6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 Q8C708 225 aa6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 Uqcc3Q8K2T4 89 aa6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 Cldn16Q925N4 235 aa6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 Rpp25lQ99JH1 163 aa6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 Ndufa6Q9CQZ5 131 aaKnown RBP6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 Slc25a39Q9D8K8 359 aa6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr972Q9EQA2 314 aa6.79□□□□□ -1.32
Trim39-201ENSMUST00000042717 Ighv1-22A0A075B5U7 117 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Gm21913J3KML9 361 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Gm21776J3QPJ5 361 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Mamld1P0C6A2 803 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Srp14P16254 110 aaKnown RBP6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 CryzP47199 331 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 SrstQ06666 185 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr263Q7TQT8 317 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr1256Q8VGP1 306 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 RhebQ921J2 184 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Tmem70Q921N7 253 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Chd6A3KFM7 2711 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Scgb1b10A0A087WPW0 93 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Erdr1J3QMM0 206 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Sprr3O09116 238 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 IfngP01580 155 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Sox15P43267 231 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 SstP60041 116 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 RanP62827 216 aaKnown RBP6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Crip1P63254 77 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Siah2Q06986 325 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Vmn1r195Q5SVD6 316 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr1535Q7TQU0 326 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Rnf24Q8BGI1 148 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Gm9961Q8BNV2 113 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr124Q8VGW6 315 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Tmem88Q9D0N8 159 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Q9D9C7 252 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Ank2Q8C8R3 3898 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Setd2E9Q5F9 2537 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 S100a8P27005 89 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Sumo1P63166 101 aaKnown RBP6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Il31Q6EAL8 163 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Phf13Q8K2W6 296 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Necap1Q9CR95 275 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Ankrd39Q9D2X0 183 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Rhox4bQ9JI43 205 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Gpr132Q9Z282 382 aa6.78□□□□□ -1.32
Trim39-201ENSMUST00000042717 Olfr748E9Q9Z0 307 aa6.77□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 44.9 ms