RNA–Protein interactions for RNA: ENSMUST00000028288.4

Notch1-201, Transcript of Neurogenic locus notch homolog protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Notch1, Length 9,488 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1-201ENSMUST00000028288 SostQ99P68 211 aa11.22□□□□□ -0.61
Notch1-201ENSMUST00000028288 Nat6Q9R123 314 aa11.22□□□□□ -0.61
Notch1-201ENSMUST00000028288 Trav21-dv12A0A075B6C4 109 aa11.22□□□□□ -0.61
Notch1-201ENSMUST00000028288 Mmp23O88676 391 aa11.22□□□□□ -0.61
Notch1-201ENSMUST00000028288 Znf319Q9ERR8 581 aa11.22□□□□□ -0.61
Notch1-201ENSMUST00000028288 PcolceQ61398 468 aa11.21□□□□□ -0.61
Notch1-201ENSMUST00000028288 Gpx7Q99LJ6 186 aa11.21□□□□□ -0.61
Notch1-201ENSMUST00000028288 Pnrc2Q9CR73 140 aa11.21□□□□□ -0.61
Notch1-201ENSMUST00000028288 Srsf1Q6PDM2 248 aaKnown RBP11.21□□□□□ -0.61
Notch1-201ENSMUST00000028288 1700031F05RikB1AX30 191 aa11.21□□□□□ -0.62
Notch1-201ENSMUST00000028288 P01657 111 aa11.21□□□□□ -0.62
Notch1-201ENSMUST00000028288 Olfr484Q8VFD3 321 aa11.21□□□□□ -0.62
Notch1-201ENSMUST00000028288 Ly6lH3BJG9 140 aa11.21□□□□□ -0.62
Notch1-201ENSMUST00000028288 Olfr1419Q7TQS2 343 aa11.21□□□□□ -0.62
Notch1-201ENSMUST00000028288 Pate4Q09098 99 aa11.21□□□□□ -0.62
Notch1-201ENSMUST00000028288 Fam168aQ8BGZ2 244 aa11.21□□□□□ -0.62
Notch1-201ENSMUST00000028288 Pgpep1Q9ESW8 209 aa11.21□□□□□ -0.62
Notch1-201ENSMUST00000028288 Gm37388A0A0A6YY46 143 aa11.21□□□□□ -0.62
Notch1-201ENSMUST00000028288 Zfp36l2P23949 484 aaKnown RBP11.21□□□□□ -0.62
Notch1-201ENSMUST00000028288 C1qtnf9Q4ZJN1 333 aa11.21□□□□□ -0.62
Notch1-201ENSMUST00000028288 Rnf126Q91YL2 313 aa11.21□□□□□ -0.62
Notch1-201ENSMUST00000028288 Gnb1lQ9EQ15 326 aa11.21□□□□□ -0.62
Notch1-201ENSMUST00000028288 UngP97931 306 aa11.2□□□□□ -0.62
Notch1-201ENSMUST00000028288 Q8BTC1 67 aa11.2□□□□□ -0.62
Notch1-201ENSMUST00000028288 Gm29644A0A087WPG2 191 aa11.2□□□□□ -0.62
Notch1-201ENSMUST00000028288 Ms4a12A0A087WSB9 263 aa11.2□□□□□ -0.62
Notch1-201ENSMUST00000028288 Trbv19A0A0B4J1H4 117 aa11.2□□□□□ -0.62
Notch1-201ENSMUST00000028288 Defa-rs2P17534 91 aa11.2□□□□□ -0.62
Notch1-201ENSMUST00000028288 Gm9944Q8C559 102 aa11.2□□□□□ -0.62
Notch1-201ENSMUST00000028288 LbhQ9CX60 105 aa11.2□□□□□ -0.62
Notch1-201ENSMUST00000028288 Dtx2Q8R3P2 619 aa11.2□□□□□ -0.62
Notch1-201ENSMUST00000028288 CklfQ9DAS1 152 aa11.2□□□□□ -0.62
Notch1-201ENSMUST00000028288 CompQ9R0G6 755 aa11.2□□□□□ -0.62
Notch1-201ENSMUST00000028288 KncnQ307W7 124 aa11.2□□□□□ -0.62
Notch1-201ENSMUST00000028288 Opn3Q9WUK7 400 aa11.2□□□□□ -0.62
Notch1-201ENSMUST00000028288 Gm29666A0A087WQ99 126 aa11.2□□□□□ -0.62
Notch1-201ENSMUST00000028288 Trav6d-3A0A075B6B3 112 aa11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 Cited2O35740 269 aa11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 Trav6-3Q5R1E6 112 aa11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 Srsf7Q8BL97 267 aaKnown RBP11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 Q9DAZ5 108 aa11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 Gm20219A0A1B0GRQ3 87 aa11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 Rbfox3Q8BIF2 374 aa11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 Klf11Q8K1S5 502 aa11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 Gm45785A0A1B0GT05 94 aa11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 Olfr810Q8VFH9 312 aa11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 GlmpQ9JHJ3 404 aa11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 OpalinQ7M750 143 aa11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 Q9CQM1 111 aa11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 Trbv13-3A0A0B4J1H2 113 aa11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 P01638 115 aa11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 Tmem136Q3TYE7 245 aa11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 Lrcol1Q3URS3 161 aa11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 Saxo2Q8BQB6 394 aa11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 Slamf6Q9ET39 351 aa11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 Morn2Q6UL01 79 aa11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 Mbnl2Q8C181 373 aaKnown RBP11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 Ssbp1Q9CYR0 152 aaKnown RBP11.19□□□□□ -0.62
Notch1-201ENSMUST00000028288 Gm29289A0A087WPY7 166 aa11.18□□□□□ -0.62
Notch1-201ENSMUST00000028288 Gm4064A0A087WR82 380 aa11.18□□□□□ -0.62
Notch1-201ENSMUST00000028288 Gm10352B2RWR6 380 aa11.18□□□□□ -0.62
Notch1-201ENSMUST00000028288 Gm21693J3QK27 380 aa11.18□□□□□ -0.62
Notch1-201ENSMUST00000028288 Gm27021M0QWE2 156 aa11.18□□□□□ -0.62
Notch1-201ENSMUST00000028288 Rbmy1a1O35698 380 aa11.18□□□□□ -0.62
Notch1-201ENSMUST00000028288 TcraP01849 138 aa11.18□□□□□ -0.62
Notch1-201ENSMUST00000028288 Saa3P04918 122 aa11.18□□□□□ -0.62
Notch1-201ENSMUST00000028288 Igkv4-51A0N8I8 119 aa11.18□□□□□ -0.62
Notch1-201ENSMUST00000028288 Znf787Q8BIF9 381 aa11.18□□□□□ -0.62
Notch1-201ENSMUST00000028288 Tcrg-V6A0A075B5Y8 134 aa11.18□□□□□ -0.62
Notch1-201ENSMUST00000028288 Cdk2ap2Q9CPY4 127 aa11.18□□□□□ -0.62
Notch1-201ENSMUST00000028288 Gtsf1lQ9CWD0 151 aa11.18□□□□□ -0.62
Notch1-201ENSMUST00000028288 Trbv12-1A0A0B4J1H0 124 aa11.18□□□□□ -0.62
Notch1-201ENSMUST00000028288 Tcf15Q60756 195 aa11.18□□□□□ -0.62
Notch1-201ENSMUST00000028288 QrfpQ8CE23 124 aa11.18□□□□□ -0.62
Notch1-201ENSMUST00000028288 Vmn1r54Q9EPB8 315 aa11.18□□□□□ -0.62
Notch1-201ENSMUST00000028288 Col5a3Q9JLI2 1739 aa11.18□□□□□ -0.62
Notch1-201ENSMUST00000028288 Ormdl2Q9CQZ0 153 aa11.18□□□□□ -0.62
Notch1-201ENSMUST00000028288 NmbQ9CR53 121 aa11.18□□□□□ -0.62
Notch1-201ENSMUST00000028288 Tspan13Q9D8C2 204 aa11.18□□□□□ -0.62
Notch1-201ENSMUST00000028288 Znf691Q3TDE8 283 aa11.17□□□□□ -0.62
Notch1-201ENSMUST00000028288 Tet2Q4JK59 1912 aaKnown RBP11.17□□□□□ -0.62
Notch1-201ENSMUST00000028288 P18532 116 aa11.17□□□□□ -0.62
Notch1-201ENSMUST00000028288 ElnP54320 860 aa11.17□□□□□ -0.62
Notch1-201ENSMUST00000028288 Igkv6-14A0A140T8P1 115 aa11.17□□□□□ -0.62
Notch1-201ENSMUST00000028288 Znf431E9QAG8 526 aa11.17□□□□□ -0.62
Notch1-201ENSMUST00000028288 Snx22Q8C084 192 aa11.17□□□□□ -0.62
Notch1-201ENSMUST00000028288 Olfr975Q8VG91 310 aa11.17□□□□□ -0.62
Notch1-201ENSMUST00000028288 Smlr1J3QMJ4 66 aa11.17□□□□□ -0.62
Notch1-201ENSMUST00000028288 Trav16d-dv11A0A075B617 117 aa11.17□□□□□ -0.62
Notch1-201ENSMUST00000028288 Lamtor2Q9JHS3 125 aa11.17□□□□□ -0.62
Notch1-201ENSMUST00000028288 Gm6871L7N248 545 aa11.17□□□□□ -0.62
Notch1-201ENSMUST00000028288 ApohQ01339 345 aa11.17□□□□□ -0.62
Notch1-201ENSMUST00000028288 Il2raP01590 268 aa11.17□□□□□ -0.62
Notch1-201ENSMUST00000028288 Mllt11P97783 90 aa11.17□□□□□ -0.62
Notch1-201ENSMUST00000028288 Q8BG31 207 aa11.17□□□□□ -0.62
Notch1-201ENSMUST00000028288 Ighv5-6A0A075B5Q0 117 aa11.16□□□□□ -0.62
Notch1-201ENSMUST00000028288 RhogP84096 191 aa11.16□□□□□ -0.62
Notch1-201ENSMUST00000028288 Cd5lQ9QWK4 352 aa11.16□□□□□ -0.62
Notch1-201ENSMUST00000028288 Ccpg1osV9GXK1 122 aa11.16□□□□□ -0.62
Notch1-201ENSMUST00000028288 Gm10912Q3UXH0 145 aa11.16□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 73 ms