RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 ANAPC13Q9BS18 74 aa4.6□□□□□ -1.67
SNX13-213ENST00000611725 MUC4Q99102 2169 aa4.6□□□□□ -1.67
SNX13-213ENST00000611725 MUC3AQ02505 3323 aa4.6□□□□□ -1.67
SNX13-213ENST00000611725 MIR7-3HGQ8N6C7 128 aa4.6□□□□□ -1.67
SNX13-213ENST00000611725 TRBV10-2A0A0K0K1G8 114 aa4.6□□□□□ -1.67
SNX13-213ENST00000611725 DEFB4AO15263 64 aa4.6□□□□□ -1.67
SNX13-213ENST00000611725 FHL3Q13643 280 aa4.6□□□□□ -1.67
SNX13-213ENST00000611725 CLPSL2Q6UWE3 100 aa4.6□□□□□ -1.67
SNX13-213ENST00000611725 TRIAP1O43715 76 aa4.59□□□□□ -1.67
SNX13-213ENST00000611725 CLEC2BQ92478 149 aa4.59□□□□□ -1.67
SNX13-213ENST00000611725 OVOL2Q9BRP0 275 aa4.59□□□□□ -1.67
SNX13-213ENST00000611725 NDUFA1O15239 70 aa4.59□□□□□ -1.67
SNX13-213ENST00000611725 C9orf66Q5T8R8 295 aa4.59□□□□□ -1.67
SNX13-213ENST00000611725 RAI1Q7Z5J4 1906 aaPredicted RBP4.59□□□□□ -1.67
SNX13-213ENST00000611725 S100A7L2Q5SY68 101 aa4.59□□□□□ -1.67
SNX13-213ENST00000611725 CLUHP3Q96NS8 147 aa4.59□□□□□ -1.67
SNX13-213ENST00000611725 TRBV6-8A0A0A6YYG3 113 aa4.59□□□□□ -1.67
SNX13-213ENST00000611725 TRBV30A0A0K0K1B3 111 aa4.59□□□□□ -1.67
SNX13-213ENST00000611725 TIMM17BO60830 172 aa4.59□□□□□ -1.67
SNX13-213ENST00000611725 EDA2RQ9HAV5 297 aa4.59□□□□□ -1.67
SNX13-213ENST00000611725 FAM222AQ5U5X8 452 aa4.59□□□□□ -1.68
SNX13-213ENST00000611725 SPANXCQ9NY87 97 aa4.59□□□□□ -1.68
SNX13-213ENST00000611725 NIPBLQ6KC79 2804 aaeCLIP4.58□□□□□ -1.68
SNX13-213ENST00000611725 IGLV10-54A0A075B6I4 117 aa4.58□□□□□ -1.68
SNX13-213ENST00000611725 LINC00694P0DN24 101 aa4.58□□□□□ -1.68
SNX13-213ENST00000611725 CDC42SE2Q9NRR3 84 aa4.58□□□□□ -1.68
SNX13-213ENST00000611725 MRPL23Q16540 153 aaKnown RBP4.58□□□□□ -1.68
SNX13-213ENST00000611725 FAM110AQ9BQ89 295 aa4.58□□□□□ -1.68
SNX13-213ENST00000611725 A8MTW9 85 aa4.58□□□□□ -1.68
SNX13-213ENST00000611725 SMIM1B2RUZ4 78 aa4.58□□□□□ -1.68
SNX13-213ENST00000611725 NDUFA7O95182 113 aa4.58□□□□□ -1.68
SNX13-213ENST00000611725 SPART-AS1P0CW21 52 aa4.58□□□□□ -1.68
SNX13-213ENST00000611725 C15orf53Q8NAA6 179 aa4.58□□□□□ -1.68
SNX13-213ENST00000611725 ADAMTSL4-AS1Q5T5F5 129 aa4.58□□□□□ -1.68
SNX13-213ENST00000611725 LINC00482Q8N8I6 264 aa4.58□□□□□ -1.68
SNX13-213ENST00000611725 LOC100131303A0A0U1RQF7 123 aa4.57□□□□□ -1.68
SNX13-213ENST00000611725 SMIM9A6NGZ8 99 aa4.57□□□□□ -1.68
SNX13-213ENST00000611725 H0YGX0 51 aa4.57□□□□□ -1.68
SNX13-213ENST00000611725 CSDC2Q9Y534 153 aaKnown RBP4.57□□□□□ -1.68
SNX13-213ENST00000611725 GAGE2AQ6NT46 116 aa4.57□□□□□ -1.68
SNX13-213ENST00000611725 COX7A2LO14548 114 aa4.57□□□□□ -1.68
SNX13-213ENST00000611725 HRNRQ86YZ3 2850 aaPredicted RBP4.57□□□□□ -1.68
SNX13-213ENST00000611725 H7C423 109 aa4.57□□□□□ -1.68
SNX13-213ENST00000611725 BAALC-AS2P0C853 105 aa4.57□□□□□ -1.68
SNX13-213ENST00000611725 TEX49A0A1B0GTD5 131 aa4.56□□□□□ -1.68
SNX13-213ENST00000611725 INAFM1C9JVW0 142 aa4.56□□□□□ -1.68
SNX13-213ENST00000611725 C3orf56Q8N813 242 aa4.56□□□□□ -1.68
SNX13-213ENST00000611725 SMR3AQ99954 134 aa4.56□□□□□ -1.68
SNX13-213ENST00000611725 SPANXDQ9BXN6 97 aa4.56□□□□□ -1.68
SNX13-213ENST00000611725 LRBAP50851 2863 aa4.56□□□□□ -1.68
SNX13-213ENST00000611725 RNF183Q96D59 192 aa4.56□□□□□ -1.68
SNX13-213ENST00000611725 IBA57-AS1B1ANH7 110 aa4.55□□□□□ -1.68
SNX13-213ENST00000611725 LST1O00453 97 aa4.55□□□□□ -1.68
SNX13-213ENST00000611725 SMCPP49901 116 aaPredicted RBP4.55□□□□□ -1.68
SNX13-213ENST00000611725 SBSPONQ8IVN8 264 aa4.55□□□□□ -1.68
SNX13-213ENST00000611725 LYRM9A8MSI8 78 aa4.55□□□□□ -1.68
SNX13-213ENST00000611725 MXRA5Q9NR99 2828 aa4.55□□□□□ -1.68
SNX13-213ENST00000611725 LECT2O14960 151 aa4.55□□□□□ -1.68
SNX13-213ENST00000611725 USP34Q70CQ2 3546 aa4.55□□□□□ -1.68
SNX13-213ENST00000611725 GHRHP01286 108 aa4.55□□□□□ -1.68
SNX13-213ENST00000611725 MT-ATP8P03928 68 aa4.55□□□□□ -1.68
SNX13-213ENST00000611725 C16orf95Q9H693 158 aa4.55□□□□□ -1.68
SNX13-213ENST00000611725 ASH1LQ9NR48 2969 aaKnown RBP4.55□□□□□ -1.68
SNX13-213ENST00000611725 IGLV5-39A0A0G2JS06 123 aa4.55□□□□□ -1.68
SNX13-213ENST00000611725 LY6G6DO95868 133 aa4.55□□□□□ -1.68
SNX13-213ENST00000611725 NTM-AS1Q6ZSK4 140 aa4.54□□□□□ -1.68
SNX13-213ENST00000611725 TRAV26-1A0A087WT03 109 aa4.54□□□□□ -1.68
SNX13-213ENST00000611725 ZNF561-AS1K7EIQ3 104 aa4.54□□□□□ -1.68
SNX13-213ENST00000611725 XGP55808 180 aa4.54□□□□□ -1.68
SNX13-213ENST00000611725 TRACP01848 142 aa4.54□□□□□ -1.68
SNX13-213ENST00000611725 PLA2G2AP14555 144 aa4.54□□□□□ -1.68
SNX13-213ENST00000611725 CXCL5P42830 114 aa4.54□□□□□ -1.68
SNX13-213ENST00000611725 KLK12Q9UKR0 248 aa4.54□□□□□ -1.68
SNX13-213ENST00000611725 LINC00269Q8N2A0 174 aa4.54□□□□□ -1.68
SNX13-213ENST00000611725 M0QXV9 152 aa4.54□□□□□ -1.68
SNX13-213ENST00000611725 IGLV5-45A0A087WSX0 123 aa4.53□□□□□ -1.68
SNX13-213ENST00000611725 KIR2DL5BQ8NHK3 375 aa4.53□□□□□ -1.68
SNX13-213ENST00000611725 SPAG11BQ08648 103 aa4.53□□□□□ -1.68
SNX13-213ENST00000611725 CDIP1Q9H305 208 aa4.53□□□□□ -1.68
SNX13-213ENST00000611725 IGLV4-60A0A075B6I1 120 aa4.53□□□□□ -1.68
SNX13-213ENST00000611725 ACYP1P07311 99 aa4.53□□□□□ -1.68
SNX13-213ENST00000611725 LINC00959A0A1B0GUT2 108 aa4.53□□□□□ -1.68
SNX13-213ENST00000611725 COX6A2Q02221 97 aa4.53□□□□□ -1.68
SNX13-213ENST00000611725 REG3AQ06141 175 aa4.53□□□□□ -1.68
SNX13-213ENST00000611725 FHL2Q14192 279 aa4.53□□□□□ -1.68
SNX13-213ENST00000611725 TMEM126AQ9H061 195 aa4.53□□□□□ -1.68
SNX13-213ENST00000611725 APCP25054 2843 aa4.53□□□□□ -1.68
SNX13-213ENST00000611725 CCL18P55774 89 aa4.53□□□□□ -1.68
SNX13-213ENST00000611725 CHCHD10Q8WYQ3 142 aaPredicted RBP4.53□□□□□ -1.68
SNX13-213ENST00000611725 LAMTOR3Q9UHA4 124 aa4.53□□□□□ -1.68
SNX13-213ENST00000611725 Q9HAA7 133 aa4.52□□□□□ -1.69
SNX13-213ENST00000611725 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.52□□□□□ -1.69
SNX13-213ENST00000611725 STAB2Q8WWQ8 2551 aa4.52□□□□□ -1.69
SNX13-213ENST00000611725 IGHV4-28A0A0C4DH34 117 aa4.52□□□□□ -1.69
SNX13-213ENST00000611725 IGHV3OR16-9A0A0B4J2B5 98 aa4.52□□□□□ -1.69
SNX13-213ENST00000611725 MIFP14174 115 aa4.52□□□□□ -1.69
SNX13-213ENST00000611725 A0A087WZ39 114 aa4.51□□□□□ -1.69
SNX13-213ENST00000611725 CD164L2Q6UWJ8 174 aa4.51□□□□□ -1.69
SNX13-213ENST00000611725 LINC01600Q96MT4 127 aa4.51□□□□□ -1.69
SNX13-213ENST00000611725 LITAFQ99732 161 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms