RNA–Protein interactions for RNA: ENST00000596411.1

SPTBN4-209, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 2

Gene SPTBN4, Length 1,885 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-209ENST00000596411 TRAV13-1A0A0B4J241 112 aa16.24■□□□□ 0.19
SPTBN4-209ENST00000596411 TRGV4A0A0C4DH28 118 aa16.24■□□□□ 0.19
SPTBN4-209ENST00000596411 CARD19Q96LW7 228 aa16.24■□□□□ 0.19
SPTBN4-209ENST00000596411 H7C2G1 150 aa16.23■□□□□ 0.19
SPTBN4-209ENST00000596411 LINC01620Q4KN68 170 aa16.22■□□□□ 0.19
SPTBN4-209ENST00000596411 KRTAP10-3P60369 221 aa16.22■□□□□ 0.19
SPTBN4-209ENST00000596411 ANKRD29Q8N6D5 301 aa16.22■□□□□ 0.19
SPTBN4-209ENST00000596411 CCDC168Q8NDH2 2452 aa16.21■□□□□ 0.19
SPTBN4-209ENST00000596411 C9JAW5 83 aa16.21■□□□□ 0.19
SPTBN4-209ENST00000596411 COX6CP09669 75 aa16.21■□□□□ 0.19
SPTBN4-209ENST00000596411 LINC00308Q8TCZ7 52 aa16.21■□□□□ 0.19
SPTBN4-209ENST00000596411 LOC100131303A0A0U1RQF7 123 aa16.2■□□□□ 0.18
SPTBN4-209ENST00000596411 PF4P02776 101 aa16.2■□□□□ 0.18
SPTBN4-209ENST00000596411 TRBV6-8A0A0A6YYG3 113 aa16.19■□□□□ 0.18
SPTBN4-209ENST00000596411 TRBV10-2A0A0K0K1G8 114 aa16.18■□□□□ 0.18
SPTBN4-209ENST00000596411 SMIM9A6NGZ8 99 aa16.18■□□□□ 0.18
SPTBN4-209ENST00000596411 CDIP1Q9H305 208 aa16.17■□□□□ 0.18
SPTBN4-209ENST00000596411 CYSRT1A8MQ03 144 aa16.16■□□□□ 0.18
SPTBN4-209ENST00000596411 PRIMA1Q86XR5 153 aa16.16■□□□□ 0.18
SPTBN4-209ENST00000596411 RPL13AP40429 203 aaKnown RBP16.16■□□□□ 0.18
SPTBN4-209ENST00000596411 NPC2P61916 151 aa16.15■□□□□ 0.18
SPTBN4-209ENST00000596411 NF1P21359 2839 aa16.15■□□□□ 0.18
SPTBN4-209ENST00000596411 HECTD1Q9ULT8 2610 aa16.15■□□□□ 0.18
SPTBN4-209ENST00000596411 DAND5Q8N907 189 aa16.14■□□□□ 0.17
SPTBN4-209ENST00000596411 H3BT86 120 aa16.14■□□□□ 0.17
SPTBN4-209ENST00000596411 LST1O00453 97 aa16.14■□□□□ 0.17
SPTBN4-209ENST00000596411 CUBNO60494 3623 aa16.13■□□□□ 0.17
SPTBN4-209ENST00000596411 LY6G6DO95868 133 aa16.12■□□□□ 0.17
SPTBN4-209ENST00000596411 SMR3AQ99954 134 aa16.12■□□□□ 0.17
SPTBN4-209ENST00000596411 TMEM262E9PQX1 116 aa16.12■□□□□ 0.17
SPTBN4-209ENST00000596411 CRLF1O75462 422 aa16.12■□□□□ 0.17
SPTBN4-209ENST00000596411 GAGE6Q13070 117 aa16.12■□□□□ 0.17
SPTBN4-209ENST00000596411 SOSTDC1Q6X4U4 206 aa16.12■□□□□ 0.17
SPTBN4-209ENST00000596411 X6R8D5 127 aa16.12■□□□□ 0.17
SPTBN4-209ENST00000596411 MEIG1Q5JSS6 88 aa16.11■□□□□ 0.17
SPTBN4-209ENST00000596411 C9orf66Q5T8R8 295 aa16.11■□□□□ 0.17
SPTBN4-209ENST00000596411 COX7B2Q8TF08 81 aa16.1■□□□□ 0.17
SPTBN4-209ENST00000596411 IGLV4-60A0A075B6I1 120 aa16.1■□□□□ 0.17
SPTBN4-209ENST00000596411 IGHV3OR16-9A0A0B4J2B5 98 aa16.1■□□□□ 0.17
SPTBN4-209ENST00000596411 SHISA2Q6UWI4 295 aa16.09■□□□□ 0.17
SPTBN4-209ENST00000596411 ACANP16112 2415 aa16.09■□□□□ 0.17
SPTBN4-209ENST00000596411 CHCHD5Q9BSY4 110 aa16.08■□□□□ 0.17
SPTBN4-209ENST00000596411 A0A087WZ39 114 aa16.07■□□□□ 0.16
SPTBN4-209ENST00000596411 A0A1B0GUV1 79 aa16.06■□□□□ 0.16
SPTBN4-209ENST00000596411 LYRM9A8MSI8 78 aa16.06■□□□□ 0.16
SPTBN4-209ENST00000596411 FAM222AQ5U5X8 452 aa16.06■□□□□ 0.16
SPTBN4-209ENST00000596411 NTN5Q8WTR8 489 aaPredicted RBP16.05■□□□□ 0.16
SPTBN4-209ENST00000596411 DEFB130BP0DP73 79 aa16.05■□□□□ 0.16
SPTBN4-209ENST00000596411 DEFB130AP0DP74 79 aa16.05■□□□□ 0.16
SPTBN4-209ENST00000596411 PRO0255Q9UI72 69 aa16.05■□□□□ 0.16
SPTBN4-209ENST00000596411 COX7A2LO14548 114 aa16.04■□□□□ 0.16
SPTBN4-209ENST00000596411 C2orf82Q6UX34 121 aa16.04■□□□□ 0.16
SPTBN4-209ENST00000596411 UNC79Q9P2D8 2635 aa16.04■□□□□ 0.16
SPTBN4-209ENST00000596411 CLEC2BQ92478 149 aa16.03■□□□□ 0.16
SPTBN4-209ENST00000596411 NOTCH3Q9UM47 2321 aa16.03■□□□□ 0.16
SPTBN4-209ENST00000596411 GYPEP15421 78 aa16.03■□□□□ 0.16
SPTBN4-209ENST00000596411 LINC01561Q8N1V8 128 aa16.03■□□□□ 0.16
SPTBN4-209ENST00000596411 UBE2WQ96B02 151 aa16.03■□□□□ 0.16
SPTBN4-209ENST00000596411 MTORP42345 2549 aa16.02■□□□□ 0.15
SPTBN4-209ENST00000596411 LINC00959A0A1B0GUT2 108 aa16.01■□□□□ 0.15
SPTBN4-209ENST00000596411 HIVEP2P31629 2446 aa16.01■□□□□ 0.15
SPTBN4-209ENST00000596411 A0A0U1RRA0 63 aa16.01■□□□□ 0.15
SPTBN4-209ENST00000596411 ITPR2Q14571 2701 aa16.01■□□□□ 0.15
SPTBN4-209ENST00000596411 JMJD1CQ15652 2540 aa16■□□□□ 0.15
SPTBN4-209ENST00000596411 IBA57-AS1B1ANH7 110 aa16■□□□□ 0.15
SPTBN4-209ENST00000596411 DEFB121Q5J5C9 76 aa16■□□□□ 0.15
SPTBN4-209ENST00000596411 TRAV13-2A0A0B4J235 113 aa15.99■□□□□ 0.15
SPTBN4-209ENST00000596411 XGP55808 180 aa15.99■□□□□ 0.15
SPTBN4-209ENST00000596411 APOC4P55056 127 aa15.97■□□□□ 0.15
SPTBN4-209ENST00000596411 TRACP01848 142 aa15.97■□□□□ 0.15
SPTBN4-209ENST00000596411 MIR7-3HGQ8N6C7 128 aa15.97■□□□□ 0.15
SPTBN4-209ENST00000596411 TEX49A0A1B0GTD5 131 aa15.96■□□□□ 0.15
SPTBN4-209ENST00000596411 MT-ATP8P03928 68 aa15.96■□□□□ 0.15
SPTBN4-209ENST00000596411 TRAV26-1A0A087WT03 109 aa15.95■□□□□ 0.14
SPTBN4-209ENST00000596411 IGKV3OR2-268A0A0C4DH90 116 aa15.95■□□□□ 0.14
SPTBN4-209ENST00000596411 INAFM1C9JVW0 142 aa15.95■□□□□ 0.14
SPTBN4-209ENST00000596411 RPL28P46779 137 aaKnown RBP15.95■□□□□ 0.14
SPTBN4-209ENST00000596411 SS18Q15532 418 aa15.95■□□□□ 0.14
SPTBN4-209ENST00000596411 TOMM7Q9P0U1 55 aa15.95■□□□□ 0.14
SPTBN4-209ENST00000596411 CITED1Q99966 193 aa15.94■□□□□ 0.14
SPTBN4-209ENST00000596411 SETD2Q9BYW2 2564 aaPredicted RBP15.93■□□□□ 0.14
SPTBN4-209ENST00000596411 PAX4O43316 350 aa15.93■□□□□ 0.14
SPTBN4-209ENST00000596411 FAM240AA0A1B0GVK7 77 aa15.93■□□□□ 0.14
SPTBN4-209ENST00000596411 CRPP02741 224 aa15.93■□□□□ 0.14
SPTBN4-209ENST00000596411 SPATA3Q8NHX4 192 aa15.93■□□□□ 0.14
SPTBN4-209ENST00000596411 Q8IZM0 81 aa15.92■□□□□ 0.14
SPTBN4-209ENST00000596411 SND1-IT1Q9HBX3 110 aa15.92■□□□□ 0.14
SPTBN4-209ENST00000596411 TRAV8-4A0A0B4J246 113 aa15.91■□□□□ 0.14
SPTBN4-209ENST00000596411 WIPF1O43516 503 aa15.91■□□□□ 0.14
SPTBN4-209ENST00000596411 C5orf38Q86SI9 138 aa15.91■□□□□ 0.14
SPTBN4-209ENST00000596411 NIPBLQ6KC79 2804 aaeCLIP15.91■□□□□ 0.14
SPTBN4-209ENST00000596411 IGKV2-28A0A075B6P5 120 aa15.9■□□□□ 0.14
SPTBN4-209ENST00000596411 IGKV2D-28P01615 120 aa15.9■□□□□ 0.14
SPTBN4-209ENST00000596411 LINC00158P58513 81 aa15.9■□□□□ 0.14
SPTBN4-209ENST00000596411 MIFP14174 115 aa15.89■□□□□ 0.13
SPTBN4-209ENST00000596411 CCL18P55774 89 aa15.88■□□□□ 0.13
SPTBN4-209ENST00000596411 LINC00337Q8N6G1 96 aa15.88■□□□□ 0.13
SPTBN4-209ENST00000596411 IGHV4-28A0A0C4DH34 117 aa15.88■□□□□ 0.13
SPTBN4-209ENST00000596411 DEFB135Q30KP9 77 aa15.88■□□□□ 0.13
SPTBN4-209ENST00000596411 C2CD3Q4AC94 2353 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms