RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 ATP6V0E2Q8NHE4 81 aa10.06□□□□□ -0.8
INO80E-203ENST00000540562 KRTAP1-3Q8IUG1 177 aa10.05□□□□□ -0.8
INO80E-203ENST00000540562 UBE2WQ96B02 151 aa10.05□□□□□ -0.8
INO80E-203ENST00000540562 SMIM1B2RUZ4 78 aa10.05□□□□□ -0.8
INO80E-203ENST00000540562 LINC00308Q8TCZ7 52 aa10.05□□□□□ -0.8
INO80E-203ENST00000540562 Q9HAA7 133 aa10.05□□□□□ -0.8
INO80E-203ENST00000540562 TRAV8-4A0A0B4J246 113 aa10.05□□□□□ -0.8
INO80E-203ENST00000540562 CIRBPQ14011 172 aaKnown RBP10.05□□□□□ -0.8
INO80E-203ENST00000540562 C3orf56Q8N813 242 aa10.05□□□□□ -0.8
INO80E-203ENST00000540562 PDZD2O15018 2839 aa10.04□□□□□ -0.8
INO80E-203ENST00000540562 IGLV4-60A0A075B6I1 120 aa10.04□□□□□ -0.8
INO80E-203ENST00000540562 SNCGO76070 127 aa10.04□□□□□ -0.8
INO80E-203ENST00000540562 ANAPC13Q9BS18 74 aa10.04□□□□□ -0.8
INO80E-203ENST00000540562 TMEM262E9PQX1 116 aa10.03□□□□□ -0.8
INO80E-203ENST00000540562 LINC01006Q8NI28 216 aa10.03□□□□□ -0.8
INO80E-203ENST00000540562 TRBV10-2A0A0K0K1G8 114 aa10.03□□□□□ -0.8
INO80E-203ENST00000540562 GIG44P09565 113 aaPredicted RBP10.03□□□□□ -0.8
INO80E-203ENST00000540562 TEX29Q8N6K0 151 aa10.03□□□□□ -0.8
INO80E-203ENST00000540562 BEAN1Q3B7T3 259 aa10.02□□□□□ -0.81
INO80E-203ENST00000540562 C15orf53Q8NAA6 179 aa10.02□□□□□ -0.81
INO80E-203ENST00000540562 TRBV30A0A0K0K1B3 111 aa10.02□□□□□ -0.81
INO80E-203ENST00000540562 HERVK_113P63121 156 aa10.01□□□□□ -0.81
INO80E-203ENST00000540562 SBSPONQ8IVN8 264 aa10.01□□□□□ -0.81
INO80E-203ENST00000540562 NDUFA1O15239 70 aa10.01□□□□□ -0.81
INO80E-203ENST00000540562 LINC00158P58513 81 aa10.01□□□□□ -0.81
INO80E-203ENST00000540562 SPANXDQ9BXN6 97 aa10.01□□□□□ -0.81
INO80E-203ENST00000540562 SPANXCQ9NY87 97 aa10.01□□□□□ -0.81
INO80E-203ENST00000540562 HIVEP1P15822 2718 aa10.01□□□□□ -0.81
INO80E-203ENST00000540562 FLNBO75369 2602 aaKnown RBP10.01□□□□□ -0.81
INO80E-203ENST00000540562 TMEM243Q9BU79 118 aa10.01□□□□□ -0.81
INO80E-203ENST00000540562 CDC42SE2Q9NRR3 84 aa10.01□□□□□ -0.81
INO80E-203ENST00000540562 MIR7-3HGQ8N6C7 128 aa10□□□□□ -0.81
INO80E-203ENST00000540562 LINC00482Q8N8I6 264 aa10□□□□□ -0.81
INO80E-203ENST00000540562 SPATA3Q8NHX4 192 aa10□□□□□ -0.81
INO80E-203ENST00000540562 XCL1P47992 114 aa10□□□□□ -0.81
INO80E-203ENST00000540562 GAGE2BQ13066 116 aa9.99□□□□□ -0.81
INO80E-203ENST00000540562 GAGE2EQ4V326 116 aa9.99□□□□□ -0.81
INO80E-203ENST00000540562 Q8N3U1 123 aa9.99□□□□□ -0.81
INO80E-203ENST00000540562 DNAJC30Q96LL9 226 aa9.99□□□□□ -0.81
INO80E-203ENST00000540562 GAGE2DQ9UEU5 116 aa9.99□□□□□ -0.81
INO80E-203ENST00000540562 IGLV10-54A0A075B6I4 117 aa9.99□□□□□ -0.81
INO80E-203ENST00000540562 ATP5G1P05496 136 aa9.98□□□□□ -0.81
INO80E-203ENST00000540562 FAM218AQ96MZ4 157 aa9.98□□□□□ -0.81
INO80E-203ENST00000540562 SCGB1A1P11684 91 aa9.98□□□□□ -0.81
INO80E-203ENST00000540562 OR13C6PQ8NH95 151 aa9.98□□□□□ -0.81
INO80E-203ENST00000540562 A8MTW9 85 aa9.98□□□□□ -0.81
INO80E-203ENST00000540562 SS18L2Q9UHA2 77 aa9.98□□□□□ -0.81
INO80E-203ENST00000540562 B5MCH6 92 aa9.97□□□□□ -0.81
INO80E-203ENST00000540562 LST1O00453 97 aa9.97□□□□□ -0.81
INO80E-203ENST00000540562 PKD1L1Q8TDX9 2849 aa9.97□□□□□ -0.81
INO80E-203ENST00000540562 TIRAPP58753 221 aa9.96□□□□□ -0.81
INO80E-203ENST00000540562 CFAP161Q6P656 301 aa9.96□□□□□ -0.81
INO80E-203ENST00000540562 PLAC8L1A1L4L8 177 aa9.96□□□□□ -0.82
INO80E-203ENST00000540562 HTN3P15516 51 aa9.96□□□□□ -0.82
INO80E-203ENST00000540562 DAZ2Q13117 558 aaKnown RBP9.96□□□□□ -0.82
INO80E-203ENST00000540562 DAZ4Q86SG3 579 aaKnown RBP9.96□□□□□ -0.82
INO80E-203ENST00000540562 DAZ3Q9NR90 486 aaKnown RBP9.96□□□□□ -0.82
INO80E-203ENST00000540562 PRR3P79522 188 aaKnown RBP9.95□□□□□ -0.82
INO80E-203ENST00000540562 F5H768 121 aa9.95□□□□□ -0.82
INO80E-203ENST00000540562 EDA2RQ9HAV5 297 aa9.95□□□□□ -0.82
INO80E-203ENST00000540562 PF4P02776 101 aa9.94□□□□□ -0.82
INO80E-203ENST00000540562 IGLV5-39A0A0G2JS06 123 aa9.94□□□□□ -0.82
INO80E-203ENST00000540562 SLPIP03973 132 aa9.94□□□□□ -0.82
INO80E-203ENST00000540562 PAX4O43316 350 aa9.93□□□□□ -0.82
INO80E-203ENST00000540562 LINC00526Q96FQ7 95 aa9.93□□□□□ -0.82
INO80E-203ENST00000540562 ANK3Q12955 4377 aaKnown RBP9.93□□□□□ -0.82
INO80E-203ENST00000540562 GYPEP15421 78 aa9.93□□□□□ -0.82
INO80E-203ENST00000540562 LINC00337Q8N6G1 96 aa9.93□□□□□ -0.82
INO80E-203ENST00000540562 SND1-IT1Q9HBX3 110 aa9.93□□□□□ -0.82
INO80E-203ENST00000540562 IGLV5-45A0A087WSX0 123 aa9.93□□□□□ -0.82
INO80E-203ENST00000540562 COX7B2Q8TF08 81 aa9.93□□□□□ -0.82
INO80E-203ENST00000540562 CCDC179H3BU77 68 aa9.92□□□□□ -0.82
INO80E-203ENST00000540562 RNASE1P07998 156 aaKnown RBP9.92□□□□□ -0.82
INO80E-203ENST00000540562 BAALC-AS2P0C853 105 aa9.91□□□□□ -0.82
INO80E-203ENST00000540562 CRPP02741 224 aa9.91□□□□□ -0.82
INO80E-203ENST00000540562 IFITM1P13164 125 aa9.91□□□□□ -0.82
INO80E-203ENST00000540562 C16orf74Q96GX8 76 aa9.91□□□□□ -0.82
INO80E-203ENST00000540562 TRBV10-1A0A0K0K1A3 114 aa9.91□□□□□ -0.82
INO80E-203ENST00000540562 C9orf129Q5T035 196 aaKnown RBP9.91□□□□□ -0.82
INO80E-203ENST00000540562 GAGE2AQ6NT46 116 aa9.91□□□□□ -0.82
INO80E-203ENST00000540562 IL17DQ8TAD2 202 aa9.91□□□□□ -0.82
INO80E-203ENST00000540562 FHL2Q14192 279 aa9.9□□□□□ -0.82
INO80E-203ENST00000540562 DEFB135Q30KP9 77 aa9.9□□□□□ -0.82
INO80E-203ENST00000540562 C6orf226Q5I0X4 101 aa9.9□□□□□ -0.82
INO80E-203ENST00000540562 NOTCH1P46531 2555 aa9.9□□□□□ -0.82
INO80E-203ENST00000540562 COX7A2LO14548 114 aa9.9□□□□□ -0.83
INO80E-203ENST00000540562 CITED1Q99966 193 aa9.9□□□□□ -0.83
INO80E-203ENST00000540562 A0A087WYN8 130 aa9.89□□□□□ -0.83
INO80E-203ENST00000540562 TRBV6-8A0A0A6YYG3 113 aa9.89□□□□□ -0.83
INO80E-203ENST00000540562 NDUFV3P56181 108 aaKnown RBP9.89□□□□□ -0.83
INO80E-203ENST00000540562 C19orf73Q9NVV2 129 aa9.89□□□□□ -0.83
INO80E-203ENST00000540562 NSD1Q96L73 2696 aaPredicted RBP9.89□□□□□ -0.83
INO80E-203ENST00000540562 NHLRC4P0CG21 123 aaPredicted RBP9.89□□□□□ -0.83
INO80E-203ENST00000540562 C9orf116Q5BN46 136 aaPredicted RBP9.89□□□□□ -0.83
INO80E-203ENST00000540562 IGLV1-51P01701 117 aa9.88□□□□□ -0.83
INO80E-203ENST00000540562 TRAV25A0A0B4J276 109 aa9.88□□□□□ -0.83
INO80E-203ENST00000540562 IGKV2-28A0A075B6P5 120 aa9.88□□□□□ -0.83
INO80E-203ENST00000540562 H3BT86 120 aa9.88□□□□□ -0.83
INO80E-203ENST00000540562 IGKV2D-28P01615 120 aa9.88□□□□□ -0.83
INO80E-203ENST00000540562 KRTAP10-3P60369 221 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 391.6 ms