RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 SERF2P84101 59 aa1.82□□□□□ -2.12
VPS50-209ENST00000467326 CMC2Q9NRP2 79 aa1.82□□□□□ -2.12
VPS50-209ENST00000467326 PTPRFP10586 1907 aa1.81□□□□□ -2.12
VPS50-209ENST00000467326 ZMYM4Q5VZL5 1548 aa1.81□□□□□ -2.12
VPS50-209ENST00000467326 MYOM1P52179 1685 aa1.81□□□□□ -2.12
VPS50-209ENST00000467326 SDK2Q58EX2 2172 aa1.81□□□□□ -2.12
VPS50-209ENST00000467326 TRBV30A0A0K0K1B3 111 aa1.81□□□□□ -2.12
VPS50-209ENST00000467326 LINC01549A6NIU2 74 aa1.81□□□□□ -2.12
VPS50-209ENST00000467326 UQCR11O14957 56 aa1.81□□□□□ -2.12
VPS50-209ENST00000467326 MGPP08493 103 aa1.81□□□□□ -2.12
VPS50-209ENST00000467326 PRR15LQ9BU68 103 aa1.81□□□□□ -2.12
VPS50-209ENST00000467326 TANC1Q9C0D5 1861 aa1.81□□□□□ -2.12
VPS50-209ENST00000467326 ARHGEF5Q12774 1597 aa1.81□□□□□ -2.12
VPS50-209ENST00000467326 VWDEQ8N2E2 1590 aa1.81□□□□□ -2.12
VPS50-209ENST00000467326 KIAA0556O60303 1618 aa1.8□□□□□ -2.12
VPS50-209ENST00000467326 USP32Q8NFA0 1604 aa1.8□□□□□ -2.12
VPS50-209ENST00000467326 TRGV2A0A075B6R0 118 aa1.8□□□□□ -2.12
VPS50-209ENST00000467326 LOC110117498A0A087WWA1 95 aa1.8□□□□□ -2.12
VPS50-209ENST00000467326 IGKV3D-7A0A0C4DH55 119 aa1.8□□□□□ -2.12
VPS50-209ENST00000467326 IGKV3OR2-268A0A0C4DH90 116 aa1.8□□□□□ -2.12
VPS50-209ENST00000467326 IGKV2-29A2NJV5 120 aaPredicted RBP1.8□□□□□ -2.12
VPS50-209ENST00000467326 IL9P15248 144 aa1.8□□□□□ -2.12
VPS50-209ENST00000467326 FCER1GP30273 86 aa1.8□□□□□ -2.12
VPS50-209ENST00000467326 CCL18P55774 89 aa1.8□□□□□ -2.12
VPS50-209ENST00000467326 FXYD3Q14802 87 aa1.8□□□□□ -2.12
VPS50-209ENST00000467326 GDF5OSQ5U4N7 250 aa1.8□□□□□ -2.12
VPS50-209ENST00000467326 UBL5Q9BZL1 73 aa1.8□□□□□ -2.12
VPS50-209ENST00000467326 LINC00846Q9NV44 126 aa1.8□□□□□ -2.12
VPS50-209ENST00000467326 MRC1P22897 1456 aa1.8□□□□□ -2.12
VPS50-209ENST00000467326 EFCAB6Q5THR3 1501 aa1.8□□□□□ -2.12
VPS50-209ENST00000467326 MROH2AA6NES4 1674 aa1.8□□□□□ -2.12
VPS50-209ENST00000467326 PLXNA1Q9UIW2 1896 aa1.8□□□□□ -2.12
VPS50-209ENST00000467326 CACNA1DQ01668 2161 aa1.79□□□□□ -2.12
VPS50-209ENST00000467326 NBDYA0A0U1RRE5 68 aa1.79□□□□□ -2.12
VPS50-209ENST00000467326 CTXND1A0A1B0GTU2 59 aa1.79□□□□□ -2.12
VPS50-209ENST00000467326 FXYD4P59646 89 aa1.79□□□□□ -2.12
VPS50-209ENST00000467326 COX17Q14061 63 aa1.79□□□□□ -2.12
VPS50-209ENST00000467326 NCBP2-AS2Q69YL0 99 aa1.79□□□□□ -2.12
VPS50-209ENST00000467326 KRTAP13-1Q8IUC0 172 aa1.79□□□□□ -2.12
VPS50-209ENST00000467326 PREX1Q8TCU6 1659 aa1.79□□□□□ -2.12
VPS50-209ENST00000467326 ALS2Q96Q42 1657 aa1.79□□□□□ -2.12
VPS50-209ENST00000467326 ITSN2Q9NZM3 1697 aa1.79□□□□□ -2.12
VPS50-209ENST00000467326 IFT172Q9UG01 1749 aa1.79□□□□□ -2.12
VPS50-209ENST00000467326 AFDNP55196 1824 aaKnown RBP1.79□□□□□ -2.12
VPS50-209ENST00000467326 PCNX2A6NKB5 2137 aa1.79□□□□□ -2.12
VPS50-209ENST00000467326 DOCK2Q92608 1830 aa1.78□□□□□ -2.12
VPS50-209ENST00000467326 KDM3BQ7LBC6 1761 aa1.78□□□□□ -2.12
VPS50-209ENST00000467326 NRXN2Q9P2S2 1712 aa1.78□□□□□ -2.12
VPS50-209ENST00000467326 CRYBG1Q9Y4K1 1723 aa1.78□□□□□ -2.12
VPS50-209ENST00000467326 NESP48681 1621 aa1.78□□□□□ -2.12
VPS50-209ENST00000467326 ADCY10Q96PN6 1610 aa1.78□□□□□ -2.12
VPS50-209ENST00000467326 ADGRB2O60241 1585 aa1.78□□□□□ -2.12
VPS50-209ENST00000467326 IQGAP2Q13576 1575 aa1.78□□□□□ -2.12
VPS50-209ENST00000467326 CDC42BPGQ6DT37 1551 aa1.78□□□□□ -2.12
VPS50-209ENST00000467326 TRBV7-4A0A0J9YYF1 115 aa1.78□□□□□ -2.12
VPS50-209ENST00000467326 PLNP26678 52 aa1.78□□□□□ -2.12
VPS50-209ENST00000467326 C10orf113Q5VZT2 155 aa1.78□□□□□ -2.12
VPS50-209ENST00000467326 C5orf56Q8N8D9 126 aa1.78□□□□□ -2.12
VPS50-209ENST00000467326 ZNF625Q96I27 306 aaPredicted RBP1.78□□□□□ -2.12
VPS50-209ENST00000467326 WFDC6Q9BQY6 131 aa1.78□□□□□ -2.12
VPS50-209ENST00000467326 LINC01558Q9Y6Z2 57 aa1.78□□□□□ -2.12
VPS50-209ENST00000467326 MED12LQ86YW9 2145 aa1.78□□□□□ -2.13
VPS50-209ENST00000467326 BIVM-ERCC5R4GMW8 1640 aa1.77□□□□□ -2.13
VPS50-209ENST00000467326 NFAT5O94916 1531 aa1.77□□□□□ -2.13
VPS50-209ENST00000467326 CD163L1Q9NR16 1453 aa1.77□□□□□ -2.13
VPS50-209ENST00000467326 GPR179Q6PRD1 2367 aa1.77□□□□□ -2.13
VPS50-209ENST00000467326 BRWD1Q9NSI6 2320 aa1.77□□□□□ -2.13
VPS50-209ENST00000467326 M0R135 149 aa1.77□□□□□ -2.13
VPS50-209ENST00000467326 IFI6P09912 130 aa1.77□□□□□ -2.13
VPS50-209ENST00000467326 CAV3P56539 151 aa1.77□□□□□ -2.13
VPS50-209ENST00000467326 Q6ZQY7 126 aa1.77□□□□□ -2.13
VPS50-209ENST00000467326 SIP14410 1827 aa1.77□□□□□ -2.13
VPS50-209ENST00000467326 DLEC1Q9Y238 1755 aa1.77□□□□□ -2.13
VPS50-209ENST00000467326 NHSQ6T4R5 1651 aa1.77□□□□□ -2.13
VPS50-209ENST00000467326 RREB1Q92766 1687 aa1.77□□□□□ -2.13
VPS50-209ENST00000467326 TRPM2O94759 1503 aa1.76□□□□□ -2.13
VPS50-209ENST00000467326 MYO18AQ92614 2054 aaKnown RBP1.76□□□□□ -2.13
VPS50-209ENST00000467326 TRAV1-2A0A0B4J238 106 aa1.76□□□□□ -2.13
VPS50-209ENST00000467326 Q6ZRN7 208 aaPredicted RBP1.76□□□□□ -2.13
VPS50-209ENST00000467326 ZNF563Q8TA94 476 aa1.76□□□□□ -2.13
VPS50-209ENST00000467326 PROK2Q9HC23 129 aa1.76□□□□□ -2.13
VPS50-209ENST00000467326 WIZO95785 1651 aa1.76□□□□□ -2.13
VPS50-209ENST00000467326 COL4A6Q14031 1691 aa1.76□□□□□ -2.13
VPS50-209ENST00000467326 SNRNP200O75643 2136 aaKnown RBP1.76□□□□□ -2.13
VPS50-209ENST00000467326 NWD1Q149M9 1564 aa1.76□□□□□ -2.13
VPS50-209ENST00000467326 AGLP35573 1532 aa1.76□□□□□ -2.13
VPS50-209ENST00000467326 PTPRDP23468 1912 aa1.76□□□□□ -2.13
VPS50-209ENST00000467326 LTBP2Q14767 1821 aa1.75□□□□□ -2.13
VPS50-209ENST00000467326 RP1P56715 2156 aa1.75□□□□□ -2.13
VPS50-209ENST00000467326 STRCP1A6NGW2 1772 aa1.75□□□□□ -2.13
VPS50-209ENST00000467326 ARFGEF2Q9Y6D5 1785 aa1.75□□□□□ -2.13
VPS50-209ENST00000467326 CDC42BPAQ5VT25 1732 aa1.75□□□□□ -2.13
VPS50-209ENST00000467326 PLCH1Q4KWH8 1693 aa1.75□□□□□ -2.13
VPS50-209ENST00000467326 MICAL3Q7RTP6 2002 aa1.75□□□□□ -2.13
VPS50-209ENST00000467326 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.75□□□□□ -2.13
VPS50-209ENST00000467326 H0Y9P7 68 aa1.75□□□□□ -2.13
VPS50-209ENST00000467326 J3QRE1 110 aa1.75□□□□□ -2.13
VPS50-209ENST00000467326 M0R3E3 92 aa1.75□□□□□ -2.13
VPS50-209ENST00000467326 HCRTO43612 131 aa1.75□□□□□ -2.13
VPS50-209ENST00000467326 S100A3P33764 101 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms