RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 IGLV10-54A0A075B6I4 117 aa8.44□□□□□ -1.06
TRAPPC9-202ENST00000438773 LINC00467Q9BRT7 94 aa8.44□□□□□ -1.06
TRAPPC9-202ENST00000438773 KLK9Q2XQG4 91 aa8.43□□□□□ -1.06
TRAPPC9-202ENST00000438773 VSIG2Q96IQ7 327 aa8.43□□□□□ -1.06
TRAPPC9-202ENST00000438773 ICOSQ9Y6W8 199 aa8.43□□□□□ -1.06
TRAPPC9-202ENST00000438773 SMIM9A6NGZ8 99 aa8.43□□□□□ -1.06
TRAPPC9-202ENST00000438773 IGHV3-30-3P0DP02 117 aa8.43□□□□□ -1.06
TRAPPC9-202ENST00000438773 XGP55808 180 aa8.43□□□□□ -1.06
TRAPPC9-202ENST00000438773 IGLV4-3A0A075B6K6 122 aa8.42□□□□□ -1.06
TRAPPC9-202ENST00000438773 ZNF561-AS1K7EIQ3 104 aa8.41□□□□□ -1.06
TRAPPC9-202ENST00000438773 VPS13CQ709C8 3753 aa8.41□□□□□ -1.06
TRAPPC9-202ENST00000438773 LINC01546A6NGU7 62 aa8.41□□□□□ -1.06
TRAPPC9-202ENST00000438773 RPL32P62910 135 aaKnown RBP8.41□□□□□ -1.06
TRAPPC9-202ENST00000438773 HERV-K104P63124 156 aa8.41□□□□□ -1.06
TRAPPC9-202ENST00000438773 KLK5Q9Y337 293 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC9-202ENST00000438773 TSHBP01222 138 aa8.4□□□□□ -1.06
TRAPPC9-202ENST00000438773 PRB2P02812 416 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC9-202ENST00000438773 C1orf158Q8N1D5 194 aa8.4□□□□□ -1.06
TRAPPC9-202ENST00000438773 OXLD1Q5BKU9 147 aa8.4□□□□□ -1.06
TRAPPC9-202ENST00000438773 LYRM9A8MSI8 78 aa8.39□□□□□ -1.07
TRAPPC9-202ENST00000438773 PRO0461Q9UI25 63 aa8.39□□□□□ -1.07
TRAPPC9-202ENST00000438773 IGHV3-30P01768 117 aa8.39□□□□□ -1.07
TRAPPC9-202ENST00000438773 IGHV3-33P01772 117 aa8.39□□□□□ -1.07
TRAPPC9-202ENST00000438773 IGHV3-30-5P0DP03 117 aa8.39□□□□□ -1.07
TRAPPC9-202ENST00000438773 IGHV1-58A0A0C4DH39 117 aa8.38□□□□□ -1.07
TRAPPC9-202ENST00000438773 TRBV6-4A0A1B0GX49 114 aa8.38□□□□□ -1.07
TRAPPC9-202ENST00000438773 CDKN2A-AS1Q9UH64 79 aa8.38□□□□□ -1.07
TRAPPC9-202ENST00000438773 PIK3CD-AS1Q5SR53 167 aa8.38□□□□□ -1.07
TRAPPC9-202ENST00000438773 FAM110AQ9BQ89 295 aa8.38□□□□□ -1.07
TRAPPC9-202ENST00000438773 TMEM126AQ9H061 195 aa8.38□□□□□ -1.07
TRAPPC9-202ENST00000438773 CUBNO60494 3623 aa8.38□□□□□ -1.07
TRAPPC9-202ENST00000438773 INAFM2P0DMQ5 153 aa8.37□□□□□ -1.07
TRAPPC9-202ENST00000438773 A0A0J9YXY3 114 aa8.37□□□□□ -1.07
TRAPPC9-202ENST00000438773 LOC100131303A0A0U1RQF7 123 aa8.37□□□□□ -1.07
TRAPPC9-202ENST00000438773 ZNF22P17026 224 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC9-202ENST00000438773 MIFP14174 115 aa8.37□□□□□ -1.07
TRAPPC9-202ENST00000438773 NFE4Q86UQ8 179 aa8.37□□□□□ -1.07
TRAPPC9-202ENST00000438773 KLK12Q9UKR0 248 aa8.37□□□□□ -1.07
TRAPPC9-202ENST00000438773 SMCPP49901 116 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC9-202ENST00000438773 NDUFV3P56181 108 aaKnown RBP8.36□□□□□ -1.07
TRAPPC9-202ENST00000438773 SPATA25Q9BR10 227 aa8.36□□□□□ -1.07
TRAPPC9-202ENST00000438773 IGKV2D-24A0A075B6R9 120 aa8.36□□□□□ -1.07
TRAPPC9-202ENST00000438773 IGHV4-28A0A0C4DH34 117 aa8.36□□□□□ -1.07
TRAPPC9-202ENST00000438773 TRBV10-2A0A0K0K1G8 114 aa8.36□□□□□ -1.07
TRAPPC9-202ENST00000438773 A0A1B0GX51 115 aa8.36□□□□□ -1.07
TRAPPC9-202ENST00000438773 COX7A2LO14548 114 aa8.36□□□□□ -1.07
TRAPPC9-202ENST00000438773 TRIAP1O43715 76 aa8.36□□□□□ -1.07
TRAPPC9-202ENST00000438773 SND1-IT1Q9HBX3 110 aa8.36□□□□□ -1.07
TRAPPC9-202ENST00000438773 LECT2O14960 151 aa8.35□□□□□ -1.07
TRAPPC9-202ENST00000438773 KIR2DL5BQ8NHK3 375 aa8.35□□□□□ -1.07
TRAPPC9-202ENST00000438773 UNC79Q9P2D8 2635 aa8.35□□□□□ -1.07
TRAPPC9-202ENST00000438773 TRBV6-8A0A0A6YYG3 113 aa8.35□□□□□ -1.07
TRAPPC9-202ENST00000438773 CCDC179H3BU77 68 aa8.35□□□□□ -1.07
TRAPPC9-202ENST00000438773 FHL3Q13643 280 aa8.35□□□□□ -1.07
TRAPPC9-202ENST00000438773 PYGO1Q9Y3Y4 419 aa8.35□□□□□ -1.07
TRAPPC9-202ENST00000438773 COX7B2Q8TF08 81 aa8.35□□□□□ -1.07
TRAPPC9-202ENST00000438773 FAM19A4Q96LR4 140 aa8.35□□□□□ -1.07
TRAPPC9-202ENST00000438773 C1orf43Q9BWL3 253 aa8.35□□□□□ -1.07
TRAPPC9-202ENST00000438773 IGHV4-30-4P0DP06 118 aa8.34□□□□□ -1.07
TRAPPC9-202ENST00000438773 RBMY1FQ15415 496 aaKnown RBP8.34□□□□□ -1.07
TRAPPC9-202ENST00000438773 C14orf132Q9NPU4 83 aa8.34□□□□□ -1.07
TRAPPC9-202ENST00000438773 IGIPA6NJ69 53 aa8.34□□□□□ -1.07
TRAPPC9-202ENST00000438773 SLPIP03973 132 aa8.34□□□□□ -1.07
TRAPPC9-202ENST00000438773 MIR7-3HGQ8N6C7 128 aa8.34□□□□□ -1.07
TRAPPC9-202ENST00000438773 CCL18P55774 89 aa8.34□□□□□ -1.07
TRAPPC9-202ENST00000438773 TRACP01848 142 aa8.33□□□□□ -1.08
TRAPPC9-202ENST00000438773 KIF25-AS1Q9Y6Z4 181 aa8.33□□□□□ -1.08
TRAPPC9-202ENST00000438773 C11orf45Q8TAV5 145 aa8.33□□□□□ -1.08
TRAPPC9-202ENST00000438773 SDIM1Q6ZPB5 146 aa8.32□□□□□ -1.08
TRAPPC9-202ENST00000438773 LINC00269Q8N2A0 174 aa8.32□□□□□ -1.08
TRAPPC9-202ENST00000438773 TMEM223A0PJW6 202 aa8.32□□□□□ -1.08
TRAPPC9-202ENST00000438773 CDIP1Q9H305 208 aa8.32□□□□□ -1.08
TRAPPC9-202ENST00000438773 UBE2D4Q9Y2X8 147 aa8.32□□□□□ -1.08
TRAPPC9-202ENST00000438773 KRTAP1-3Q8IUG1 177 aa8.32□□□□□ -1.08
TRAPPC9-202ENST00000438773 TRAV13-2A0A0B4J235 113 aa8.31□□□□□ -1.08
TRAPPC9-202ENST00000438773 UBL5Q9BZL1 73 aa8.31□□□□□ -1.08
TRAPPC9-202ENST00000438773 Q6ZSN1 163 aa8.31□□□□□ -1.08
TRAPPC9-202ENST00000438773 UBE2D3P61077 147 aa8.31□□□□□ -1.08
TRAPPC9-202ENST00000438773 UBE2D2P62837 147 aa8.31□□□□□ -1.08
TRAPPC9-202ENST00000438773 KRTAP24-1Q3LI83 254 aa8.31□□□□□ -1.08
TRAPPC9-202ENST00000438773 TEX15Q9BXT5 2789 aa8.3□□□□□ -1.08
TRAPPC9-202ENST00000438773 TSPEAR-AS2P59090 65 aa8.3□□□□□ -1.08
TRAPPC9-202ENST00000438773 BEAN1Q3B7T3 259 aa8.3□□□□□ -1.08
TRAPPC9-202ENST00000438773 CRYBG3Q68DQ2 2970 aa8.3□□□□□ -1.08
TRAPPC9-202ENST00000438773 GCN1Q92616 2671 aaKnown RBP8.3□□□□□ -1.08
TRAPPC9-202ENST00000438773 DEFB131BA0A096LNP1 70 aa8.29□□□□□ -1.08
TRAPPC9-202ENST00000438773 LINC00315P59091 139 aa8.29□□□□□ -1.08
TRAPPC9-202ENST00000438773 H7C423 109 aa8.29□□□□□ -1.08
TRAPPC9-202ENST00000438773 DEFB105AQ8NG35 78 aa8.29□□□□□ -1.08
TRAPPC9-202ENST00000438773 RMI2Q96E14 147 aa8.29□□□□□ -1.08
TRAPPC9-202ENST00000438773 STAB1Q9NY15 2570 aa8.29□□□□□ -1.08
TRAPPC9-202ENST00000438773 UBE2D1P51668 147 aa8.29□□□□□ -1.08
TRAPPC9-202ENST00000438773 TIRAPP58753 221 aa8.29□□□□□ -1.08
TRAPPC9-202ENST00000438773 REG3AQ06141 175 aa8.29□□□□□ -1.08
TRAPPC9-202ENST00000438773 CAMK2N2Q96S95 79 aa8.29□□□□□ -1.08
TRAPPC9-202ENST00000438773 SPAG11BQ08648 103 aa8.28□□□□□ -1.08
TRAPPC9-202ENST00000438773 C11orf72Q8NBR9 251 aa8.28□□□□□ -1.08
TRAPPC9-202ENST00000438773 CSMD2Q7Z408 3487 aa8.28□□□□□ -1.08
TRAPPC9-202ENST00000438773 IGLV4-69A0A075B6H9 119 aa8.28□□□□□ -1.08
TRAPPC9-202ENST00000438773 TRAV23DV6A0A075B6W5 121 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms