RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 MAP2P11137 1827 aaKnown RBP1.86□□□□□ -2.11
BRCA1-204ENST00000412061 ADAMTS12P58397 1594 aa1.85□□□□□ -2.11
BRCA1-204ENST00000412061 ALKQ9UM73 1620 aa1.85□□□□□ -2.11
BRCA1-204ENST00000412061 RGPD1P0DJD0 1748 aa1.85□□□□□ -2.11
BRCA1-204ENST00000412061 LAMA4Q16363 1823 aa1.85□□□□□ -2.11
BRCA1-204ENST00000412061 KIF20BQ96Q89 1820 aa1.85□□□□□ -2.11
BRCA1-204ENST00000412061 SNRPFP62306 86 aaKnown RBP1.85□□□□□ -2.11
BRCA1-204ENST00000412061 Q5VV11 94 aa1.85□□□□□ -2.11
BRCA1-204ENST00000412061 PRO1854Q9UHT4 67 aa1.85□□□□□ -2.11
BRCA1-204ENST00000412061 ASCC3Q8N3C0 2202 aaKnown RBP1.85□□□□□ -2.11
BRCA1-204ENST00000412061 SIPA1L3O60292 1781 aaPredicted RBP1.85□□□□□ -2.11
BRCA1-204ENST00000412061 PPLO60437 1756 aa1.85□□□□□ -2.11
BRCA1-204ENST00000412061 RGPD4Q7Z3J3 1758 aa1.85□□□□□ -2.11
BRCA1-204ENST00000412061 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.11
BRCA1-204ENST00000412061 DDX60Q8IY21 1712 aaKnown RBP1.84□□□□□ -2.11
BRCA1-204ENST00000412061 TRAV22A0A0B4J277 110 aa1.84□□□□□ -2.12
BRCA1-204ENST00000412061 EFNA4P52798 201 aa1.84□□□□□ -2.12
BRCA1-204ENST00000412061 UBE2D3P61077 147 aa1.84□□□□□ -2.12
BRCA1-204ENST00000412061 UBE2D2P62837 147 aa1.84□□□□□ -2.12
BRCA1-204ENST00000412061 SPAG11BQ08648 103 aa1.84□□□□□ -2.12
BRCA1-204ENST00000412061 SPAG11AQ6PDA7 123 aa1.84□□□□□ -2.12
BRCA1-204ENST00000412061 SFTA2Q6UW10 78 aa1.84□□□□□ -2.12
BRCA1-204ENST00000412061 Q8N6K4 173 aa1.84□□□□□ -2.12
BRCA1-204ENST00000412061 NCOA6Q14686 2063 aaPredicted RBP1.83□□□□□ -2.12
BRCA1-204ENST00000412061 FAM208AQ9UK61 1670 aaKnown RBP1.83□□□□□ -2.12
BRCA1-204ENST00000412061 MED13LQ71F56 2210 aa1.83□□□□□ -2.12
BRCA1-204ENST00000412061 NWD1Q149M9 1564 aa1.83□□□□□ -2.12
BRCA1-204ENST00000412061 TRBV30A0A0K0K1B3 111 aa1.83□□□□□ -2.12
BRCA1-204ENST00000412061 TRBV7-7A0A0K0K1E9 115 aa1.83□□□□□ -2.12
BRCA1-204ENST00000412061 NDUFC1O43677 76 aa1.83□□□□□ -2.12
BRCA1-204ENST00000412061 APOC3P02656 99 aa1.83□□□□□ -2.12
BRCA1-204ENST00000412061 GYPAP02724 150 aa1.83□□□□□ -2.12
BRCA1-204ENST00000412061 SERP2Q8N6R1 65 aa1.83□□□□□ -2.12
BRCA1-204ENST00000412061 TMEM14BQ9NUH8 114 aa1.83□□□□□ -2.12
BRCA1-204ENST00000412061 V9GYH0 126 aa1.83□□□□□ -2.12
BRCA1-204ENST00000412061 PARP4Q9UKK3 1724 aaKnown RBP1.83□□□□□ -2.12
BRCA1-204ENST00000412061 A0A1B0GUL6 1792 aa1.82□□□□□ -2.12
BRCA1-204ENST00000412061 HMGN4O00479 90 aa1.82□□□□□ -2.12
BRCA1-204ENST00000412061 ZNF720Q7Z2F6 126 aa1.82□□□□□ -2.12
BRCA1-204ENST00000412061 R4GMQ9 66 aa1.82□□□□□ -2.12
BRCA1-204ENST00000412061 MYH4Q9Y623 1939 aa1.82□□□□□ -2.12
BRCA1-204ENST00000412061 RGPD3A6NKT7 1758 aaPredicted RBP1.81□□□□□ -2.12
BRCA1-204ENST00000412061 TECTAO75443 2155 aa1.81□□□□□ -2.12
BRCA1-204ENST00000412061 C3P01024 1663 aa1.81□□□□□ -2.12
BRCA1-204ENST00000412061 COX6CP09669 75 aa1.81□□□□□ -2.12
BRCA1-204ENST00000412061 CCL18P55774 89 aa1.81□□□□□ -2.12
BRCA1-204ENST00000412061 LINC00575Q6W349 94 aa1.81□□□□□ -2.12
BRCA1-204ENST00000412061 TRGV9Q99603 122 aa1.81□□□□□ -2.12
BRCA1-204ENST00000412061 CDC42SE2Q9NRR3 84 aa1.81□□□□□ -2.12
BRCA1-204ENST00000412061 CACFD1Q9UGQ2 172 aa1.81□□□□□ -2.12
BRCA1-204ENST00000412061 TIAM2Q8IVF5 1701 aa1.81□□□□□ -2.12
BRCA1-204ENST00000412061 PLIN4Q96Q06 1357 aa1.8□□□□□ -2.12
BRCA1-204ENST00000412061 SYS1-DBNDD2H3BUS1 97 aa1.8□□□□□ -2.12
BRCA1-204ENST00000412061 K7EP34 96 aa1.8□□□□□ -2.12
BRCA1-204ENST00000412061 DEFB119Q8N690 84 aa1.8□□□□□ -2.12
BRCA1-204ENST00000412061 LCN9Q8WX39 176 aa1.8□□□□□ -2.12
BRCA1-204ENST00000412061 C20orf78Q9BR46 151 aa1.8□□□□□ -2.12
BRCA1-204ENST00000412061 ABCA1O95477 2261 aa1.8□□□□□ -2.12
BRCA1-204ENST00000412061 KIF1AQ12756 1690 aa1.79□□□□□ -2.12
BRCA1-204ENST00000412061 KDM3BQ7LBC6 1761 aa1.79□□□□□ -2.12
BRCA1-204ENST00000412061 LOC285095A0A1B0GVY8 99 aa1.79□□□□□ -2.12
BRCA1-204ENST00000412061 J3QKU1 62 aa1.79□□□□□ -2.12
BRCA1-204ENST00000412061 PDCD5O14737 125 aa1.79□□□□□ -2.12
BRCA1-204ENST00000412061 CFDP00746 253 aaPredicted RBP1.79□□□□□ -2.12
BRCA1-204ENST00000412061 NMBP08949 121 aa1.79□□□□□ -2.12
BRCA1-204ENST00000412061 KRTAP12-3P60328 96 aa1.79□□□□□ -2.12
BRCA1-204ENST00000412061 TMEM170BQ5T4T1 132 aa1.79□□□□□ -2.12
BRCA1-204ENST00000412061 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
BRCA1-204ENST00000412061 Q96NJ1 140 aa1.79□□□□□ -2.12
BRCA1-204ENST00000412061 WFDC6Q9BQY6 131 aa1.79□□□□□ -2.12
BRCA1-204ENST00000412061 BPESC1Q9GZL8 116 aa1.79□□□□□ -2.12
BRCA1-204ENST00000412061 DIP2CQ9Y2E4 1556 aa1.78□□□□□ -2.12
BRCA1-204ENST00000412061 ANKRD36CQ5JPF3 1778 aa1.78□□□□□ -2.12
BRCA1-204ENST00000412061 C10orf99Q6UWK7 81 aa1.78□□□□□ -2.12
BRCA1-204ENST00000412061 COL4A6Q14031 1691 aa1.78□□□□□ -2.12
BRCA1-204ENST00000412061 PKD1L3Q7Z443 1732 aa1.78□□□□□ -2.12
BRCA1-204ENST00000412061 SCN7AQ01118 1682 aa1.77□□□□□ -2.13
BRCA1-204ENST00000412061 LMO7Q8WWI1 1683 aa1.77□□□□□ -2.13
BRCA1-204ENST00000412061 UBR1Q8IWV7 1749 aa1.77□□□□□ -2.13
BRCA1-204ENST00000412061 TRGV1A0A0A0MS02 117 aa1.77□□□□□ -2.13
BRCA1-204ENST00000412061 TRAV1-2A0A0B4J238 106 aa1.77□□□□□ -2.13
BRCA1-204ENST00000412061 IGLC7A0M8Q6 106 aa1.77□□□□□ -2.13
BRCA1-204ENST00000412061 TMEM14DPA8MWL7 114 aa1.77□□□□□ -2.13
BRCA1-204ENST00000412061 H7BZZ5 65 aa1.77□□□□□ -2.13
BRCA1-204ENST00000412061 M0R135 149 aa1.77□□□□□ -2.13
BRCA1-204ENST00000412061 CYB5AP00167 134 aa1.77□□□□□ -2.13
BRCA1-204ENST00000412061 PEA15Q15121 130 aa1.77□□□□□ -2.13
BRCA1-204ENST00000412061 VMO1Q7Z5L0 202 aa1.77□□□□□ -2.13
BRCA1-204ENST00000412061 BAGE3Q86Y29 109 aa1.77□□□□□ -2.13
BRCA1-204ENST00000412061 NXT2Q9NPJ8 142 aaKnown RBP1.77□□□□□ -2.13
BRCA1-204ENST00000412061 BCORQ6W2J9 1755 aa1.77□□□□□ -2.13
BRCA1-204ENST00000412061 CTXND1A0A1B0GTU2 59 aa1.76□□□□□ -2.13
BRCA1-204ENST00000412061 SNRPGP15A8MWD9 76 aa1.76□□□□□ -2.13
BRCA1-204ENST00000412061 F8VRH5 84 aa1.76□□□□□ -2.13
BRCA1-204ENST00000412061 ACYP2P14621 99 aa1.76□□□□□ -2.13
BRCA1-204ENST00000412061 SNRPGP62308 76 aaKnown RBP1.76□□□□□ -2.13
BRCA1-204ENST00000412061 DEFA5Q01523 94 aa1.76□□□□□ -2.13
BRCA1-204ENST00000412061 SMCO4Q9NRQ5 59 aa1.76□□□□□ -2.13
BRCA1-204ENST00000412061 ARL2-SNX15V9GYD0 113 aa1.76□□□□□ -2.13
BRCA1-204ENST00000412061 DUOX1Q9NRD9 1551 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms