RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Hoxd3P09027 433 aa11.76□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Pax8Q00288 457 aa11.76□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Zfp248Q640N4 576 aa11.76□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Defa21Q8C1P2 93 aa11.76□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Slc35e4Q8K3D6 351 aa11.76□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Mogat1Q91ZV4 335 aa11.76□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Xcl1P47993 114 aa11.76□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Gng7Q61016 68 aa11.76□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Mrpl27Q99N92 148 aa11.75□□□□□ -0.53
Col5a1-201ENSMUST00000028280 SNORCQ9CXL7 121 aa11.75□□□□□ -0.53
Col5a1-201ENSMUST00000028280 AgmatA2AS89 358 aa11.75□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Gm9920D3YVZ2 140 aa11.75□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Pilrb2Q2YFS1 225 aa11.75□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Foxl1Q64731 336 aa11.75□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Lyzl1Q9CPX3 148 aa11.75□□□□□ -0.53
Col5a1-201ENSMUST00000028280 4931428L18RikQ9D4S9 127 aa11.75□□□□□ -0.53
Col5a1-201ENSMUST00000028280 P2ry6Q9ERK9 328 aa11.75□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Prr15Q9D1T5 122 aa11.75□□□□□ -0.53
Col5a1-201ENSMUST00000028280 H2al2bA9Z055 111 aa11.75□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Gm10842Q3U587 122 aa11.75□□□□□ -0.53
Col5a1-201ENSMUST00000028280 4930596D02RikQ3V0H9 216 aa11.75□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Trav7n-4A0A075B620 113 aa11.75□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Prss33Q80WM7 277 aa11.75□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Vmn1r54Q9EPB8 315 aa11.75□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Timp3P39876 211 aa11.74□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Cmc4Q61908 68 aa11.74□□□□□ -0.53
Col5a1-201ENSMUST00000028280 9830107B12RikD3Z5D6 160 aa11.74□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Gm26727M0QWT1 121 aa11.74□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Defb4P82019 63 aa11.74□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Znf474Q6V5K9 347 aa11.74□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Arpc1aQ9R0Q6 370 aa11.74□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Trav16d-dv11A0A075B617 117 aa11.74□□□□□ -0.53
Col5a1-201ENSMUST00000028280 OstcQ78XF5 149 aa11.74□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Znf524Q9D0B1 321 aa11.74□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Gm29666A0A087WQ99 126 aa11.74□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Nkx2-8O70584 235 aa11.74□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Gng5Q80SZ7 68 aa11.74□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Tmem91Q8C581 172 aa11.74□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Ltbp4Q8K4G1 1666 aa11.74□□□□□ -0.53
Col5a1-201ENSMUST00000028280 TroQ6DIC6 2087 aa11.74□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Gm45871A0A1B0GRI9 540 aa11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Slc25a53A2AF28 346 aa11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 MdfiP70331 251 aa11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 SlaQ60898 281 aa11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Trav12d-1A0N8R0 115 aa11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Slc25a35Q5SWT3 300 aa11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Slc25a16Q8C0K5 332 aa11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Olfr491Q8VG06 310 aa11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Prss28Q924N9 274 aa11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Gm26938S4R185 226 aa11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 GaptQ8CB93 157 aa11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Cd200r1Q9ES57 326 aa11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Plxnb1Q8CJH3 2119 aa11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Trav4-2A0A075B638 110 aa11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 P01896 185 aa11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Ccl11P48298 97 aa11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Osr1Q9WVG7 266 aa11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 GchfrP99025 84 aa11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Rbm38Q62176 237 aaKnown RBP11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Iba57Q8CAK1 358 aaKnown RBP11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Hist3h2bbQ8CGP0 126 aa11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Hist3h2baQ9D2U9 126 aa11.73□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Fam19a2Q7TPG7 131 aa11.72□□□□□ -0.53
Col5a1-201ENSMUST00000028280 PkigO70139 76 aa11.72□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Cela1Q91X79 266 aa11.72□□□□□ -0.53
Col5a1-201ENSMUST00000028280 P01667 111 aa11.72□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Gm5615Q3UW02 101 aa11.72□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Higd1aQ9JLR9 95 aa11.72□□□□□ -0.53
Col5a1-201ENSMUST00000028280 QrfpQ8CE23 124 aa11.72□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Znrf1Q91V17 227 aa11.72□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Igkv4-62A0A0G2JDW9 117 aa11.72□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Tcrg-V6A0A075B5Y8 134 aa11.72□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Ighv1-47A0A0A6YY41 117 aa11.72□□□□□ -0.53
Col5a1-201ENSMUST00000028280 EtdQ80SW5 59 aa11.72□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Csf2rb2P26954 878 aa11.71□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Paqr4Q9JJE4 273 aa11.71□□□□□ -0.53
Col5a1-201ENSMUST00000028280 VwceQ3U515 929 aa11.71□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Itgbl1Q8VDV0 494 aa11.71□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Plac1Q9JI83 173 aa11.71□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Trav6d-5A0A075B6B9 112 aa11.71□□□□□ -0.53
Col5a1-201ENSMUST00000028280 Trdv1A0A075B657 112 aa11.71□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Awat1A2ADU9 328 aa11.71□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Igsf23B2RTN2 239 aa11.71□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Gm28038F7BCN9 126 aa11.71□□□□□ -0.54
Col5a1-201ENSMUST00000028280 2210407C18RikQ6YI28 220 aa11.71□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Crybb3Q9JJU9 211 aa11.71□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Efemp2Q9WVJ9 443 aa11.71□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Fam208bQ5DTT3 2382 aa11.71□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Cep295Q8BQ48 2412 aa11.71□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Spink1P09036 80 aa11.71□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Ighv1-22A0A075B5U7 117 aa11.71□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Igkv10-95A0A0G2JFY3 115 aa11.71□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Dynlt3P56387 116 aa11.71□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Pex7P97865 318 aa11.71□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Prss57Q14B24 284 aa11.71□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Defb6Q91VD6 63 aa11.71□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Q9DAS2 200 aa11.71□□□□□ -0.54
Col5a1-201ENSMUST00000028280 StrcQ8VIM6 1809 aa11.71□□□□□ -0.54
Col5a1-201ENSMUST00000028280 1500009C09RikD3YYW9 81 aa11.7□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Phxr1P15973 60 aa11.7□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms