RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 IGHV3-30-5P0DP03 117 aa11.15□□□□□ -0.62
MKS1-204ENST00000537529 GCN1Q92616 2671 aaKnown RBP11.15□□□□□ -0.62
MKS1-204ENST00000537529 TRGV4A0A0C4DH28 118 aa11.15□□□□□ -0.63
MKS1-204ENST00000537529 CUBNO60494 3623 aa11.14□□□□□ -0.63
MKS1-204ENST00000537529 TIRAPP58753 221 aa11.14□□□□□ -0.63
MKS1-204ENST00000537529 NTM-AS1Q6ZSK4 140 aa11.14□□□□□ -0.63
MKS1-204ENST00000537529 GTSF1LQ9H1H1 148 aa11.14□□□□□ -0.63
MKS1-204ENST00000537529 CSDC2Q9Y534 153 aaKnown RBP11.14□□□□□ -0.63
MKS1-204ENST00000537529 TMEM238C9JI98 176 aa11.13□□□□□ -0.63
MKS1-204ENST00000537529 SBSPONQ8IVN8 264 aa11.13□□□□□ -0.63
MKS1-204ENST00000537529 CRLF1O75462 422 aa11.13□□□□□ -0.63
MKS1-204ENST00000537529 VSIG2Q96IQ7 327 aa11.13□□□□□ -0.63
MKS1-204ENST00000537529 TRAV8-3A0A0A6YYJ7 113 aa11.12□□□□□ -0.63
MKS1-204ENST00000537529 LINC00694P0DN24 101 aa11.12□□□□□ -0.63
MKS1-204ENST00000537529 C10orf126Q8N4M7 172 aa11.12□□□□□ -0.63
MKS1-204ENST00000537529 TMEM243Q9BU79 118 aa11.12□□□□□ -0.63
MKS1-204ENST00000537529 PGPEP1Q9NXJ5 209 aa11.12□□□□□ -0.63
MKS1-204ENST00000537529 HECTD1Q9ULT8 2610 aa11.12□□□□□ -0.63
MKS1-204ENST00000537529 IGLV5-45A0A087WSX0 123 aa11.12□□□□□ -0.63
MKS1-204ENST00000537529 A0A0J9YXY3 114 aa11.12□□□□□ -0.63
MKS1-204ENST00000537529 SPINK8P0C7L1 97 aa11.12□□□□□ -0.63
MKS1-204ENST00000537529 SETD2Q9BYW2 2564 aaPredicted RBP11.11□□□□□ -0.63
MKS1-204ENST00000537529 UBE2L6O14933 153 aa11.11□□□□□ -0.63
MKS1-204ENST00000537529 APOMO95445 188 aa11.1□□□□□ -0.63
MKS1-204ENST00000537529 HERVK_113P63121 156 aa11.1□□□□□ -0.63
MKS1-204ENST00000537529 FHL2Q14192 279 aa11.1□□□□□ -0.63
MKS1-204ENST00000537529 OCIAD2Q56VL3 154 aa11.1□□□□□ -0.63
MKS1-204ENST00000537529 KIR2DL5BQ8NHK3 375 aa11.1□□□□□ -0.63
MKS1-204ENST00000537529 NDUFA12Q9UI09 145 aa11.1□□□□□ -0.63
MKS1-204ENST00000537529 LOC100131303A0A0U1RQF7 123 aa11.1□□□□□ -0.63
MKS1-204ENST00000537529 FAM19A3Q7Z5A8 133 aa11.1□□□□□ -0.63
MKS1-204ENST00000537529 TMEM101Q96IK0 257 aa11.1□□□□□ -0.63
MKS1-204ENST00000537529 CDKN2A-AS1Q9UH64 79 aa11.1□□□□□ -0.63
MKS1-204ENST00000537529 SETXQ7Z333 2677 aaKnown RBP11.09□□□□□ -0.63
MKS1-204ENST00000537529 SMIM9A6NGZ8 99 aa11.09□□□□□ -0.63
MKS1-204ENST00000537529 H7C423 109 aa11.09□□□□□ -0.63
MKS1-204ENST00000537529 RPL24P83731 157 aaKnown RBP11.09□□□□□ -0.63
MKS1-204ENST00000537529 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.09□□□□□ -0.63
MKS1-204ENST00000537529 CITED1Q99966 193 aa11.09□□□□□ -0.63
MKS1-204ENST00000537529 LINC00612Q8N6U2 182 aa11.08□□□□□ -0.63
MKS1-204ENST00000537529 SPATA3Q8NHX4 192 aa11.08□□□□□ -0.63
MKS1-204ENST00000537529 TSPAN13O95857 204 aa11.08□□□□□ -0.64
MKS1-204ENST00000537529 LINC00242Q5T6M2 205 aa11.08□□□□□ -0.64
MKS1-204ENST00000537529 ZFAND6Q6FIF0 208 aa11.08□□□□□ -0.64
MKS1-204ENST00000537529 CDC42SE2Q9NRR3 84 aa11.08□□□□□ -0.64
MKS1-204ENST00000537529 CFC1BP0CG36 223 aa11.07□□□□□ -0.64
MKS1-204ENST00000537529 CFC1P0CG37 223 aa11.07□□□□□ -0.64
MKS1-204ENST00000537529 X6R8D5 127 aa11.07□□□□□ -0.64
MKS1-204ENST00000537529 DEFB130BP0DP73 79 aa11.07□□□□□ -0.64
MKS1-204ENST00000537529 DEFB130AP0DP74 79 aa11.07□□□□□ -0.64
MKS1-204ENST00000537529 LYRM7Q5U5X0 104 aa11.07□□□□□ -0.64
MKS1-204ENST00000537529 A4D1N5 150 aa11.06□□□□□ -0.64
MKS1-204ENST00000537529 K7ERU9 68 aa11.06□□□□□ -0.64
MKS1-204ENST00000537529 COX6A2Q02221 97 aa11.06□□□□□ -0.64
MKS1-204ENST00000537529 MUSTN1Q8IVN3 82 aa11.06□□□□□ -0.64
MKS1-204ENST00000537529 TRAV13-1A0A0B4J241 112 aa11.05□□□□□ -0.64
MKS1-204ENST00000537529 LITAFQ99732 161 aa11.05□□□□□ -0.64
MKS1-204ENST00000537529 PRO1854Q9UHT4 67 aa11.05□□□□□ -0.64
MKS1-204ENST00000537529 OTOGQ6ZRI0 2925 aa11.05□□□□□ -0.64
MKS1-204ENST00000537529 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.05□□□□□ -0.64
MKS1-204ENST00000537529 A8MZ25 164 aa11.05□□□□□ -0.64
MKS1-204ENST00000537529 APOC4P55056 127 aa11.05□□□□□ -0.64
MKS1-204ENST00000537529 SPANXDQ9BXN6 97 aa11.05□□□□□ -0.64
MKS1-204ENST00000537529 SPANXCQ9NY87 97 aa11.05□□□□□ -0.64
MKS1-204ENST00000537529 A0A0B4J2C4 111 aa11.04□□□□□ -0.64
MKS1-204ENST00000537529 IGLV5-39A0A0G2JS06 123 aa11.04□□□□□ -0.64
MKS1-204ENST00000537529 NDUFA1O15239 70 aa11.04□□□□□ -0.64
MKS1-204ENST00000537529 RBX1P62877 108 aa11.04□□□□□ -0.64
MKS1-204ENST00000537529 JMJD1CQ15652 2540 aa11.04□□□□□ -0.64
MKS1-204ENST00000537529 TRBV6-8A0A0A6YYG3 113 aa11.04□□□□□ -0.64
MKS1-204ENST00000537529 F8W1H4 67 aa11.04□□□□□ -0.64
MKS1-204ENST00000537529 H3BMG7 143 aa11.04□□□□□ -0.64
MKS1-204ENST00000537529 TIMM17BO60830 172 aa11.04□□□□□ -0.64
MKS1-204ENST00000537529 CBY1Q9Y3M2 126 aa11.03□□□□□ -0.64
MKS1-204ENST00000537529 LOC107984156A0A0G2JMH3 177 aa11.02□□□□□ -0.64
MKS1-204ENST00000537529 GAGE6Q13070 117 aa11.02□□□□□ -0.64
MKS1-204ENST00000537529 MIAQ16674 131 aa11.02□□□□□ -0.64
MKS1-204ENST00000537529 ARL17AQ8IVW1 177 aa11.02□□□□□ -0.64
MKS1-204ENST00000537529 LYRM9A8MSI8 78 aa11.02□□□□□ -0.65
MKS1-204ENST00000537529 SMIM1B2RUZ4 78 aa11.02□□□□□ -0.65
MKS1-204ENST00000537529 RNF151Q2KHN1 245 aa11.02□□□□□ -0.65
MKS1-204ENST00000537529 CHCHD5Q9BSY4 110 aa11.01□□□□□ -0.65
MKS1-204ENST00000537529 PRSS2P07478 247 aa11□□□□□ -0.65
MKS1-204ENST00000537529 GYPEP15421 78 aa11□□□□□ -0.65
MKS1-204ENST00000537529 DEFB135Q30KP9 77 aa11□□□□□ -0.65
MKS1-204ENST00000537529 ADAMTSL4-AS1Q5T5F5 129 aa11□□□□□ -0.65
MKS1-204ENST00000537529 NIPBLQ6KC79 2804 aaeCLIP11□□□□□ -0.65
MKS1-204ENST00000537529 FN1P02751 2386 aaKnown RBP11□□□□□ -0.65
MKS1-204ENST00000537529 NOTCH2Q04721 2471 aa11□□□□□ -0.65
MKS1-204ENST00000537529 C2CD3Q4AC94 2353 aa10.99□□□□□ -0.65
MKS1-204ENST00000537529 CIRBPQ14011 172 aaKnown RBP10.99□□□□□ -0.65
MKS1-204ENST00000537529 FAM222AQ5U5X8 452 aa10.99□□□□□ -0.65
MKS1-204ENST00000537529 SFTA2Q6UW10 78 aa10.99□□□□□ -0.65
MKS1-204ENST00000537529 WFDC9Q8NEX5 89 aa10.99□□□□□ -0.65
MKS1-204ENST00000537529 ATP6V0E2Q8NHE4 81 aa10.99□□□□□ -0.65
MKS1-204ENST00000537529 PRO0255Q9UI72 69 aa10.99□□□□□ -0.65
MKS1-204ENST00000537529 ERG28Q9UKR5 140 aa10.99□□□□□ -0.65
MKS1-204ENST00000537529 F5H768 121 aa10.99□□□□□ -0.65
MKS1-204ENST00000537529 EIF4EBP3O60516 100 aaPredicted RBP10.99□□□□□ -0.65
MKS1-204ENST00000537529 IGHV3-33P01772 117 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms