RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 HERV-K104P63124 156 aa11.44□□□□□ -0.58
PPFIA1-222ENST00000532504 COX8AP10176 69 aa11.43□□□□□ -0.58
PPFIA1-222ENST00000532504 ATRQ13535 2644 aa11.43□□□□□ -0.58
PPFIA1-222ENST00000532504 TDRG1Q3Y452 100 aa11.43□□□□□ -0.58
PPFIA1-222ENST00000532504 C9orf85Q96MD7 179 aa11.42□□□□□ -0.58
PPFIA1-222ENST00000532504 DEFB105AQ8NG35 78 aa11.41□□□□□ -0.58
PPFIA1-222ENST00000532504 TTTY13Q9BZ97 58 aa11.41□□□□□ -0.58
PPFIA1-222ENST00000532504 COX11Q9Y6N1 276 aa11.41□□□□□ -0.58
PPFIA1-222ENST00000532504 ETDCA0A1B0GVM5 59 aa11.41□□□□□ -0.58
PPFIA1-222ENST00000532504 CDK2AP2O75956 126 aa11.41□□□□□ -0.58
PPFIA1-222ENST00000532504 C14orf177Q52M58 125 aa11.41□□□□□ -0.58
PPFIA1-222ENST00000532504 SOCS3O14543 225 aa11.4□□□□□ -0.58
PPFIA1-222ENST00000532504 IGLC3P0DOY3 106 aa11.4□□□□□ -0.58
PPFIA1-222ENST00000532504 RBX1P62877 108 aa11.4□□□□□ -0.58
PPFIA1-222ENST00000532504 C2orf82Q6UX34 121 aa11.4□□□□□ -0.58
PPFIA1-222ENST00000532504 A0A096LNT2 108 aa11.4□□□□□ -0.58
PPFIA1-222ENST00000532504 TRAV13-2A0A0B4J235 113 aa11.4□□□□□ -0.58
PPFIA1-222ENST00000532504 NUPR2A6NF83 97 aa11.39□□□□□ -0.59
PPFIA1-222ENST00000532504 TEP1Q99973 2627 aaKnown RBP11.39□□□□□ -0.59
PPFIA1-222ENST00000532504 CITED1Q99966 193 aa11.39□□□□□ -0.59
PPFIA1-222ENST00000532504 SND1-IT1Q9HBX3 110 aa11.39□□□□□ -0.59
PPFIA1-222ENST00000532504 RNF185Q96GF1 192 aa11.39□□□□□ -0.59
PPFIA1-222ENST00000532504 MAST4O15021 2626 aa11.38□□□□□ -0.59
PPFIA1-222ENST00000532504 NCR3O14931 201 aa11.38□□□□□ -0.59
PPFIA1-222ENST00000532504 ANKRD39Q53RE8 183 aa11.38□□□□□ -0.59
PPFIA1-222ENST00000532504 OVOL2Q9BRP0 275 aa11.38□□□□□ -0.59
PPFIA1-222ENST00000532504 LELP1Q5T871 98 aa11.37□□□□□ -0.59
PPFIA1-222ENST00000532504 COL27A1Q8IZC6 1860 aaPredicted RBP11.37□□□□□ -0.59
PPFIA1-222ENST00000532504 TRAV12-1A0A0B4J245 112 aa11.37□□□□□ -0.59
PPFIA1-222ENST00000532504 CFAP54Q96N23 3096 aa11.37□□□□□ -0.59
PPFIA1-222ENST00000532504 C9JAW5 83 aa11.37□□□□□ -0.59
PPFIA1-222ENST00000532504 CXCL5P42830 114 aa11.36□□□□□ -0.59
PPFIA1-222ENST00000532504 UBE2AP49459 152 aa11.36□□□□□ -0.59
PPFIA1-222ENST00000532504 TNRC18O15417 2968 aaPredicted RBP11.36□□□□□ -0.59
PPFIA1-222ENST00000532504 LINC01545Q5VT33 79 aa11.36□□□□□ -0.59
PPFIA1-222ENST00000532504 LINC00526Q96FQ7 95 aa11.36□□□□□ -0.59
PPFIA1-222ENST00000532504 VCANP13611 3396 aa11.36□□□□□ -0.59
PPFIA1-222ENST00000532504 K7ERJ3 54 aa11.36□□□□□ -0.59
PPFIA1-222ENST00000532504 PRO1854Q9UHT4 67 aa11.36□□□□□ -0.59
PPFIA1-222ENST00000532504 CRYBA4P53673 196 aa11.35□□□□□ -0.59
PPFIA1-222ENST00000532504 PRSS47A8MTI9 375 aa11.35□□□□□ -0.59
PPFIA1-222ENST00000532504 CDKN2A-AS1Q9UH64 79 aa11.35□□□□□ -0.59
PPFIA1-222ENST00000532504 GAS8-AS1O95177 125 aa11.35□□□□□ -0.59
PPFIA1-222ENST00000532504 FHL3Q13643 280 aa11.35□□□□□ -0.59
PPFIA1-222ENST00000532504 MIR7-3HGQ8N6C7 128 aa11.35□□□□□ -0.59
PPFIA1-222ENST00000532504 ODF1Q14990 250 aa11.34□□□□□ -0.59
PPFIA1-222ENST00000532504 BEAN1Q3B7T3 259 aa11.34□□□□□ -0.59
PPFIA1-222ENST00000532504 IGLV4-3A0A075B6K6 122 aa11.34□□□□□ -0.59
PPFIA1-222ENST00000532504 COA6Q5JTJ3 125 aaKnown RBP11.34□□□□□ -0.59
PPFIA1-222ENST00000532504 CEND1Q8N111 149 aa11.34□□□□□ -0.59
PPFIA1-222ENST00000532504 IGHV1-58A0A0C4DH39 117 aa11.34□□□□□ -0.59
PPFIA1-222ENST00000532504 KRTAP1-3Q8IUG1 177 aa11.34□□□□□ -0.59
PPFIA1-222ENST00000532504 RNASE8Q8TDE3 154 aaKnown RBP11.33□□□□□ -0.6
PPFIA1-222ENST00000532504 MUSTN1Q8IVN3 82 aa11.33□□□□□ -0.6
PPFIA1-222ENST00000532504 H7C423 109 aa11.33□□□□□ -0.6
PPFIA1-222ENST00000532504 MIAQ16674 131 aa11.32□□□□□ -0.6
PPFIA1-222ENST00000532504 MTURNQ8N3F0 131 aa11.32□□□□□ -0.6
PPFIA1-222ENST00000532504 IGSF10Q6WRI0 2623 aa11.31□□□□□ -0.6
PPFIA1-222ENST00000532504 TRBV27A0A0K0K1C4 114 aa11.31□□□□□ -0.6
PPFIA1-222ENST00000532504 LRCOL1A6NCL2 159 aa11.31□□□□□ -0.6
PPFIA1-222ENST00000532504 TSHBP01222 138 aa11.31□□□□□ -0.6
PPFIA1-222ENST00000532504 NFE4Q86UQ8 179 aa11.31□□□□□ -0.6
PPFIA1-222ENST00000532504 NHLRC4P0CG21 123 aaPredicted RBP11.31□□□□□ -0.6
PPFIA1-222ENST00000532504 VPS13AQ96RL7 3174 aa11.31□□□□□ -0.6
PPFIA1-222ENST00000532504 TINCRA0A1B0GVN0 87 aa11.3□□□□□ -0.6
PPFIA1-222ENST00000532504 UBE2D3P61077 147 aa11.3□□□□□ -0.6
PPFIA1-222ENST00000532504 UBE2D2P62837 147 aa11.3□□□□□ -0.6
PPFIA1-222ENST00000532504 BVES-AS1Q5T3Y7 98 aa11.29□□□□□ -0.6
PPFIA1-222ENST00000532504 TRBV6-5A0A0K0K1A5 114 aa11.29□□□□□ -0.6
PPFIA1-222ENST00000532504 SBSPONQ8IVN8 264 aa11.29□□□□□ -0.6
PPFIA1-222ENST00000532504 TRAV8-4A0A0B4J246 113 aa11.29□□□□□ -0.6
PPFIA1-222ENST00000532504 CDPF1Q6NVV7 123 aa11.29□□□□□ -0.6
PPFIA1-222ENST00000532504 NRACQ8N912 160 aa11.29□□□□□ -0.6
PPFIA1-222ENST00000532504 CARD19Q96LW7 228 aa11.29□□□□□ -0.6
PPFIA1-222ENST00000532504 E9PLD3 99 aa11.29□□□□□ -0.6
PPFIA1-222ENST00000532504 FHL2Q14192 279 aa11.29□□□□□ -0.6
PPFIA1-222ENST00000532504 XAGE1AQ9HD64 81 aa11.29□□□□□ -0.6
PPFIA1-222ENST00000532504 BPTFQ12830 3046 aa11.28□□□□□ -0.6
PPFIA1-222ENST00000532504 GAGE2AQ6NT46 116 aa11.28□□□□□ -0.6
PPFIA1-222ENST00000532504 A4D1N5 150 aa11.28□□□□□ -0.6
PPFIA1-222ENST00000532504 SYCNQ0VAF6 134 aa11.28□□□□□ -0.6
PPFIA1-222ENST00000532504 AGRNO00468 2067 aa11.28□□□□□ -0.6
PPFIA1-222ENST00000532504 CELA1Q9UNI1 258 aa11.27□□□□□ -0.6
PPFIA1-222ENST00000532504 IFITM1P13164 125 aa11.27□□□□□ -0.61
PPFIA1-222ENST00000532504 A0A087WZ39 114 aa11.27□□□□□ -0.61
PPFIA1-222ENST00000532504 UFSP1Q6NVU6 142 aa11.26□□□□□ -0.61
PPFIA1-222ENST00000532504 SETXQ7Z333 2677 aaKnown RBP11.26□□□□□ -0.61
PPFIA1-222ENST00000532504 FAM19A5Q7Z5A7 132 aaPredicted RBP11.26□□□□□ -0.61
PPFIA1-222ENST00000532504 CFC1BP0CG36 223 aa11.25□□□□□ -0.61
PPFIA1-222ENST00000532504 CFC1P0CG37 223 aa11.25□□□□□ -0.61
PPFIA1-222ENST00000532504 POLR2KP53803 58 aaKnown RBP11.25□□□□□ -0.61
PPFIA1-222ENST00000532504 C12orf74Q32Q52 190 aa11.25□□□□□ -0.61
PPFIA1-222ENST00000532504 BAHCC1Q9P281 2608 aa11.25□□□□□ -0.61
PPFIA1-222ENST00000532504 CHD6Q8TD26 2715 aa11.25□□□□□ -0.61
PPFIA1-222ENST00000532504 LINC00959A0A1B0GUT2 108 aa11.25□□□□□ -0.61
PPFIA1-222ENST00000532504 PIK3CD-AS1Q5SR53 167 aa11.24□□□□□ -0.61
PPFIA1-222ENST00000532504 ZNF22P17026 224 aaPredicted RBP11.24□□□□□ -0.61
PPFIA1-222ENST00000532504 CD164L2Q6UWJ8 174 aa11.24□□□□□ -0.61
PPFIA1-222ENST00000532504 A8MZ25 164 aa11.23□□□□□ -0.61
PPFIA1-222ENST00000532504 RBMY1FQ15415 496 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms