RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 S100A3P33764 101 aa1.68□□□□□ -2.14
LINC01088-202ENST00000505149 C1orf137Q5JT78 98 aa1.68□□□□□ -2.14
LINC01088-202ENST00000505149 FAM74A4Q5TZK3 123 aa1.68□□□□□ -2.14
LINC01088-202ENST00000505149 PRR15LQ9BU68 103 aa1.68□□□□□ -2.14
LINC01088-202ENST00000505149 SNURFQ9Y675 71 aa1.68□□□□□ -2.14
LINC01088-202ENST00000505149 LHFPL6Q9Y693 200 aa1.68□□□□□ -2.14
LINC01088-202ENST00000505149 KDM6BO15054 1643 aa1.68□□□□□ -2.14
LINC01088-202ENST00000505149 LTBP4Q8N2S1 1624 aa1.68□□□□□ -2.14
LINC01088-202ENST00000505149 ZNF407Q9C0G0 2248 aa1.68□□□□□ -2.14
LINC01088-202ENST00000505149 DOCK2Q92608 1830 aa1.68□□□□□ -2.14
LINC01088-202ENST00000505149 IQGAP2Q13576 1575 aa1.68□□□□□ -2.14
LINC01088-202ENST00000505149 WIZO95785 1651 aa1.67□□□□□ -2.14
LINC01088-202ENST00000505149 ZNF142P52746 1687 aaPredicted RBP1.67□□□□□ -2.14
LINC01088-202ENST00000505149 KDM3BQ7LBC6 1761 aa1.67□□□□□ -2.14
LINC01088-202ENST00000505149 EFCAB6Q5THR3 1501 aa1.67□□□□□ -2.14
LINC01088-202ENST00000505149 PTPRBP23467 1997 aa1.67□□□□□ -2.14
LINC01088-202ENST00000505149 LRP5O75197 1615 aa1.67□□□□□ -2.14
LINC01088-202ENST00000505149 NUPR2A6NF83 97 aa1.67□□□□□ -2.14
LINC01088-202ENST00000505149 PPYP01298 95 aa1.67□□□□□ -2.14
LINC01088-202ENST00000505149 IGHV3-30P01768 117 aa1.67□□□□□ -2.14
LINC01088-202ENST00000505149 IGHV3-30-5P0DP03 117 aa1.67□□□□□ -2.14
LINC01088-202ENST00000505149 KRTAP25-1Q3LHN0 102 aa1.67□□□□□ -2.14
LINC01088-202ENST00000505149 GDF5OSQ5U4N7 250 aa1.67□□□□□ -2.14
LINC01088-202ENST00000505149 KRTAP26-1Q6PEX3 210 aa1.67□□□□□ -2.14
LINC01088-202ENST00000505149 HIGD2AQ9BW72 106 aa1.67□□□□□ -2.14
LINC01088-202ENST00000505149 MICAL3Q7RTP6 2002 aa1.67□□□□□ -2.14
LINC01088-202ENST00000505149 CDC42BPGQ6DT37 1551 aa1.67□□□□□ -2.14
LINC01088-202ENST00000505149 MYOM1P52179 1685 aa1.67□□□□□ -2.14
LINC01088-202ENST00000505149 USP54Q70EL1 1684 aa1.67□□□□□ -2.14
LINC01088-202ENST00000505149 SHROOM3Q8TF72 1996 aa1.67□□□□□ -2.14
LINC01088-202ENST00000505149 AGLP35573 1532 aa1.66□□□□□ -2.14
LINC01088-202ENST00000505149 ZMYM4Q5VZL5 1548 aa1.66□□□□□ -2.14
LINC01088-202ENST00000505149 IFT172Q9UG01 1749 aa1.66□□□□□ -2.14
LINC01088-202ENST00000505149 SVILO95425 2214 aa1.66□□□□□ -2.14
LINC01088-202ENST00000505149 IGKV3D-7A0A0C4DH55 119 aa1.66□□□□□ -2.14
LINC01088-202ENST00000505149 A0A0J9YY99 117 aa1.66□□□□□ -2.14
LINC01088-202ENST00000505149 TRBV6-5A0A0K0K1A5 114 aa1.66□□□□□ -2.14
LINC01088-202ENST00000505149 TRBV30A0A0K0K1B3 111 aa1.66□□□□□ -2.14
LINC01088-202ENST00000505149 Q86TA4 180 aa1.66□□□□□ -2.14
LINC01088-202ENST00000505149 LINC00304Q8N9R0 145 aa1.66□□□□□ -2.14
LINC01088-202ENST00000505149 C4orf3Q8WVX3 66 aa1.66□□□□□ -2.14
LINC01088-202ENST00000505149 AMELXQ99217 191 aa1.66□□□□□ -2.14
LINC01088-202ENST00000505149 TXNDC17Q9BRA2 123 aa1.66□□□□□ -2.14
LINC01088-202ENST00000505149 MAST1Q9Y2H9 1570 aa1.66□□□□□ -2.14
LINC01088-202ENST00000505149 MED13Q9UHV7 2174 aa1.66□□□□□ -2.14
LINC01088-202ENST00000505149 COL5A3P25940 1745 aaPredicted RBP1.66□□□□□ -2.14
LINC01088-202ENST00000505149 CRYBG1Q9Y4K1 1723 aa1.66□□□□□ -2.14
LINC01088-202ENST00000505149 SLIT2O94813 1529 aa1.66□□□□□ -2.14
LINC01088-202ENST00000505149 MGAMO43451 1857 aa1.65□□□□□ -2.14
LINC01088-202ENST00000505149 PREX1Q8TCU6 1659 aa1.65□□□□□ -2.15
LINC01088-202ENST00000505149 CD163L1Q9NR16 1453 aa1.65□□□□□ -2.15
LINC01088-202ENST00000505149 TRBV7-4A0A0J9YYF1 115 aa1.65□□□□□ -2.15
LINC01088-202ENST00000505149 CLPSL1A2RUU4 121 aa1.65□□□□□ -2.15
LINC01088-202ENST00000505149 F8VRH5 84 aa1.65□□□□□ -2.15
LINC01088-202ENST00000505149 DNAL4O96015 105 aa1.65□□□□□ -2.15
LINC01088-202ENST00000505149 KRTAP12-4P60329 112 aa1.65□□□□□ -2.15
LINC01088-202ENST00000505149 CNBPP62633 177 aaKnown RBP1.65□□□□□ -2.15
LINC01088-202ENST00000505149 PDE6HQ13956 83 aa1.65□□□□□ -2.15
LINC01088-202ENST00000505149 C9orf163Q8N9P6 203 aa1.65□□□□□ -2.15
LINC01088-202ENST00000505149 R4GMQ9 66 aa1.65□□□□□ -2.15
LINC01088-202ENST00000505149 ITSN1Q15811 1721 aa1.65□□□□□ -2.15
LINC01088-202ENST00000505149 USP32Q8NFA0 1604 aa1.65□□□□□ -2.15
LINC01088-202ENST00000505149 NFAT5O94916 1531 aa1.65□□□□□ -2.15
LINC01088-202ENST00000505149 EXPH5Q8NEV8 1989 aa1.65□□□□□ -2.15
LINC01088-202ENST00000505149 PLXNA3P51805 1871 aa1.65□□□□□ -2.15
LINC01088-202ENST00000505149 COL4A6Q14031 1691 aa1.64□□□□□ -2.15
LINC01088-202ENST00000505149 ALS2Q96Q42 1657 aa1.64□□□□□ -2.15
LINC01088-202ENST00000505149 KIAA2026Q5HYC2 2103 aa1.64□□□□□ -2.15
LINC01088-202ENST00000505149 NWD1Q149M9 1564 aa1.64□□□□□ -2.15
LINC01088-202ENST00000505149 CDC42BPAQ5VT25 1732 aa1.64□□□□□ -2.15
LINC01088-202ENST00000505149 A0A087WVE0 104 aa1.64□□□□□ -2.15
LINC01088-202ENST00000505149 A0A1B0GUT8 65 aa1.64□□□□□ -2.15
LINC01088-202ENST00000505149 NDUFB1O75438 58 aa1.64□□□□□ -2.15
LINC01088-202ENST00000505149 IFI6P09912 130 aa1.64□□□□□ -2.15
LINC01088-202ENST00000505149 CAV3P56539 151 aa1.64□□□□□ -2.15
LINC01088-202ENST00000505149 BRD3OSQ6XYD6 125 aa1.64□□□□□ -2.15
LINC01088-202ENST00000505149 FDCSPQ8NFU4 85 aa1.64□□□□□ -2.15
LINC01088-202ENST00000505149 TOP2BQ02880 1626 aa1.64□□□□□ -2.15
LINC01088-202ENST00000505149 PLXNA1Q9UIW2 1896 aa1.64□□□□□ -2.15
LINC01088-202ENST00000505149 MED12LQ86YW9 2145 aa1.64□□□□□ -2.15
LINC01088-202ENST00000505149 STRCP1A6NGW2 1772 aa1.64□□□□□ -2.15
LINC01088-202ENST00000505149 SIPA1L3O60292 1781 aaPredicted RBP1.64□□□□□ -2.15
LINC01088-202ENST00000505149 ARFGEF2Q9Y6D5 1785 aa1.64□□□□□ -2.15
LINC01088-202ENST00000505149 SHANK1Q9Y566 2161 aa1.64□□□□□ -2.15
LINC01088-202ENST00000505149 MRC1P22897 1456 aa1.63□□□□□ -2.15
LINC01088-202ENST00000505149 NUMA1Q14980 2115 aa1.63□□□□□ -2.15
LINC01088-202ENST00000505149 ABCA5Q8WWZ7 1642 aa1.63□□□□□ -2.15
LINC01088-202ENST00000505149 SCN3AQ9NY46 2000 aa1.63□□□□□ -2.15
LINC01088-202ENST00000505149 TRPM2O94759 1503 aa1.63□□□□□ -2.15
LINC01088-202ENST00000505149 IGKV3-7A0A075B6H7 116 aa1.63□□□□□ -2.15
LINC01088-202ENST00000505149 TRAV1-2A0A0B4J238 106 aa1.63□□□□□ -2.15
LINC01088-202ENST00000505149 M0R3E3 92 aa1.63□□□□□ -2.15
LINC01088-202ENST00000505149 HMGA1P17096 107 aaKnown RBP1.63□□□□□ -2.15
LINC01088-202ENST00000505149 SNRPGP62308 76 aaKnown RBP1.63□□□□□ -2.15
LINC01088-202ENST00000505149 SPINT4Q6UDR6 99 aa1.63□□□□□ -2.15
LINC01088-202ENST00000505149 Q6ZTI0 123 aa1.63□□□□□ -2.15
LINC01088-202ENST00000505149 ZNF563Q8TA94 476 aa1.63□□□□□ -2.15
LINC01088-202ENST00000505149 COX7B2Q8TF08 81 aa1.63□□□□□ -2.15
LINC01088-202ENST00000505149 Q9BRP9 147 aa1.63□□□□□ -2.15
LINC01088-202ENST00000505149 PSORS1C2Q9UIG4 136 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms