RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 CHD1O14646 1710 aa1.64□□□□□ -2.15
SMC5-203ENST00000475540 hADV29S1A0JD25 119 aa1.64□□□□□ -2.15
SMC5-203ENST00000475540 K7EIL1 84 aa1.64□□□□□ -2.15
SMC5-203ENST00000475540 LY6G6CO95867 125 aa1.64□□□□□ -2.15
SMC5-203ENST00000475540 ACYP2P14621 99 aa1.64□□□□□ -2.15
SMC5-203ENST00000475540 RPL37P61927 97 aaKnown RBP1.64□□□□□ -2.15
SMC5-203ENST00000475540 Q8N6K4 173 aa1.64□□□□□ -2.15
SMC5-203ENST00000475540 VAMP8Q9BV40 100 aa1.64□□□□□ -2.15
SMC5-203ENST00000475540 V9GYH0 126 aa1.64□□□□□ -2.15
SMC5-203ENST00000475540 SPTBN5Q9NRC6 3674 aaKnown RBP1.63□□□□□ -2.15
SMC5-203ENST00000475540 MAGI1Q96QZ7 1491 aaPredicted RBP1.63□□□□□ -2.15
SMC5-203ENST00000475540 DOPEY1Q5JWR5 2465 aa1.63□□□□□ -2.15
SMC5-203ENST00000475540 SCRIBQ14160 1630 aa1.63□□□□□ -2.15
SMC5-203ENST00000475540 CHKB-CPT1BH3BT56 60 aa1.63□□□□□ -2.15
SMC5-203ENST00000475540 Q0VG73 95 aa1.63□□□□□ -2.15
SMC5-203ENST00000475540 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.63□□□□□ -2.15
SMC5-203ENST00000475540 Q9H521 79 aa1.63□□□□□ -2.15
SMC5-203ENST00000475540 MANBALQ9NQG1 85 aa1.63□□□□□ -2.15
SMC5-203ENST00000475540 CFAP47Q6ZTR5 3102 aa1.63□□□□□ -2.15
SMC5-203ENST00000475540 ADGRL2O95490 1459 aa1.63□□□□□ -2.15
SMC5-203ENST00000475540 SHANK2Q9UPX8 1470 aa1.63□□□□□ -2.15
SMC5-203ENST00000475540 VCANP13611 3396 aa1.62□□□□□ -2.15
SMC5-203ENST00000475540 ALKQ9UM73 1620 aa1.62□□□□□ -2.15
SMC5-203ENST00000475540 CFAP43Q8NDM7 1665 aa1.62□□□□□ -2.15
SMC5-203ENST00000475540 ITPR3Q14573 2671 aa1.62□□□□□ -2.15
SMC5-203ENST00000475540 TRGV1A0A0A0MS02 117 aa1.62□□□□□ -2.15
SMC5-203ENST00000475540 SPINT3P49223 89 aa1.62□□□□□ -2.15
SMC5-203ENST00000475540 UBE2D3P61077 147 aa1.62□□□□□ -2.15
SMC5-203ENST00000475540 UBE2D2P62837 147 aa1.62□□□□□ -2.15
SMC5-203ENST00000475540 SEC11AP67812 179 aa1.62□□□□□ -2.15
SMC5-203ENST00000475540 PMCHL2Q9BQD1 86 aa1.62□□□□□ -2.15
SMC5-203ENST00000475540 BPESC1Q9GZL8 116 aa1.62□□□□□ -2.15
SMC5-203ENST00000475540 LAMC3Q9Y6N6 1575 aa1.62□□□□□ -2.15
SMC5-203ENST00000475540 ZNF292O60281 2723 aa1.62□□□□□ -2.15
SMC5-203ENST00000475540 GCN1Q92616 2671 aaKnown RBP1.62□□□□□ -2.15
SMC5-203ENST00000475540 CLASP1Q7Z460 1538 aa1.61□□□□□ -2.15
SMC5-203ENST00000475540 TANC1Q9C0D5 1861 aa1.61□□□□□ -2.15
SMC5-203ENST00000475540 HMGN4O00479 90 aa1.61□□□□□ -2.15
SMC5-203ENST00000475540 COX6CP09669 75 aa1.61□□□□□ -2.15
SMC5-203ENST00000475540 C6orf52Q5T4I8 152 aa1.61□□□□□ -2.15
SMC5-203ENST00000475540 Q5VV11 94 aa1.61□□□□□ -2.15
SMC5-203ENST00000475540 VMO1Q7Z5L0 202 aa1.61□□□□□ -2.15
SMC5-203ENST00000475540 SMIM11BQ8TCY0 68 aa1.61□□□□□ -2.15
SMC5-203ENST00000475540 PRO1854Q9UHT4 67 aa1.61□□□□□ -2.15
SMC5-203ENST00000475540 V9GYS6 101 aa1.61□□□□□ -2.15
SMC5-203ENST00000475540 KIF21BO75037 1637 aa1.61□□□□□ -2.15
SMC5-203ENST00000475540 PI4KAP42356 2102 aa1.61□□□□□ -2.15
SMC5-203ENST00000475540 PSME4Q14997 1843 aa1.61□□□□□ -2.15
SMC5-203ENST00000475540 MYOM1P52179 1685 aa1.61□□□□□ -2.15
SMC5-203ENST00000475540 PPRC1Q5VV67 1664 aaKnown RBP1.61□□□□□ -2.15
SMC5-203ENST00000475540 PRDM15P57071 1507 aaPredicted RBP1.61□□□□□ -2.15
SMC5-203ENST00000475540 LRRC7Q96NW7 1537 aa1.61□□□□□ -2.15
SMC5-203ENST00000475540 COL6A6A6NMZ7 2263 aa1.6□□□□□ -2.15
SMC5-203ENST00000475540 HECTD1Q9ULT8 2610 aa1.6□□□□□ -2.15
SMC5-203ENST00000475540 TRAV1-2A0A0B4J238 106 aa1.6□□□□□ -2.15
SMC5-203ENST00000475540 TRAV22A0A0B4J277 110 aa1.6□□□□□ -2.15
SMC5-203ENST00000475540 ATOX1O00244 68 aa1.6□□□□□ -2.15
SMC5-203ENST00000475540 NDUFC1O43677 76 aa1.6□□□□□ -2.15
SMC5-203ENST00000475540 TMEM170BQ5T4T1 132 aa1.6□□□□□ -2.15
SMC5-203ENST00000475540 AMELXQ99217 191 aa1.6□□□□□ -2.15
SMC5-203ENST00000475540 RAPGEF2Q9Y4G8 1499 aa1.6□□□□□ -2.15
SMC5-203ENST00000475540 ABCA2Q9BZC7 2435 aa1.6□□□□□ -2.15
SMC5-203ENST00000475540 CDK13Q14004 1512 aaKnown RBP1.6□□□□□ -2.15
SMC5-203ENST00000475540 ANKRD36BQ8N2N9 1353 aa1.59□□□□□ -2.15
SMC5-203ENST00000475540 DIP2CQ9Y2E4 1556 aa1.59□□□□□ -2.15
SMC5-203ENST00000475540 MADDQ8WXG6 1647 aa1.59□□□□□ -2.15
SMC5-203ENST00000475540 TMEM14DPA8MWL7 114 aa1.59□□□□□ -2.15
SMC5-203ENST00000475540 M0R135 149 aa1.59□□□□□ -2.15
SMC5-203ENST00000475540 CDC42SE2Q9NRR3 84 aa1.59□□□□□ -2.15
SMC5-203ENST00000475540 SETD2Q9BYW2 2564 aaPredicted RBP1.59□□□□□ -2.15
SMC5-203ENST00000475540 MED13LQ71F56 2210 aa1.59□□□□□ -2.16
SMC5-203ENST00000475540 RANBP2P49792 3224 aaKnown RBP1.58□□□□□ -2.16
SMC5-203ENST00000475540 CTXND1A0A1B0GTU2 59 aa1.58□□□□□ -2.16
SMC5-203ENST00000475540 KRTAP10-4P60372 401 aaPredicted RBP1.58□□□□□ -2.16
SMC5-203ENST00000475540 ABCA12Q86UK0 2595 aa1.58□□□□□ -2.16
SMC5-203ENST00000475540 MUC3AQ02505 3323 aa1.58□□□□□ -2.16
SMC5-203ENST00000475540 IFT172Q9UG01 1749 aa1.57□□□□□ -2.16
SMC5-203ENST00000475540 ROS1P08922 2347 aa1.57□□□□□ -2.16
SMC5-203ENST00000475540 LAMA4Q16363 1823 aa1.57□□□□□ -2.16
SMC5-203ENST00000475540 GVQW2A0A096LPI5 108 aaPredicted RBP1.57□□□□□ -2.16
SMC5-203ENST00000475540 PVALEFA0A1B0GWK0 134 aa1.57□□□□□ -2.16
SMC5-203ENST00000475540 IGLC7A0M8Q6 106 aa1.57□□□□□ -2.16
SMC5-203ENST00000475540 F8VRH5 84 aa1.57□□□□□ -2.16
SMC5-203ENST00000475540 SFT2D2O95562 160 aa1.57□□□□□ -2.16
SMC5-203ENST00000475540 TRAPPC2P0DI81 140 aa1.57□□□□□ -2.16
SMC5-203ENST00000475540 TRAPPC2BP0DI82 140 aa1.57□□□□□ -2.16
SMC5-203ENST00000475540 SMIM4Q8WVI0 70 aa1.57□□□□□ -2.16
SMC5-203ENST00000475540 ABCA1O95477 2261 aa1.57□□□□□ -2.16
SMC5-203ENST00000475540 PREX1Q8TCU6 1659 aa1.56□□□□□ -2.16
SMC5-203ENST00000475540 UQCR11O14957 56 aa1.56□□□□□ -2.16
SMC5-203ENST00000475540 APOC3P02656 99 aa1.56□□□□□ -2.16
SMC5-203ENST00000475540 ASIPP42127 132 aa1.56□□□□□ -2.16
SMC5-203ENST00000475540 BAGE2Q86Y30 109 aa1.56□□□□□ -2.16
SMC5-203ENST00000475540 FAIMQ9NVQ4 179 aa1.56□□□□□ -2.16
SMC5-203ENST00000475540 TTC28Q96AY4 2481 aa1.56□□□□□ -2.16
SMC5-203ENST00000475540 EHBP1L1Q8N3D4 1523 aa1.56□□□□□ -2.16
SMC5-203ENST00000475540 MKI67P46013 3256 aaKnown RBP1.55□□□□□ -2.16
SMC5-203ENST00000475540 KDM5AP29375 1690 aaKnown RBP1.55□□□□□ -2.16
SMC5-203ENST00000475540 ZDBF2Q9HCK1 2354 aa1.55□□□□□ -2.16
SMC5-203ENST00000475540 KALRNO60229 2985 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms