RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 CDIP1Q9H305 208 aa8.21□□□□□ -1.1
HPS1-208ENST00000467246 NOP10Q9NPE3 64 aaKnown RBP8.21□□□□□ -1.1
HPS1-208ENST00000467246 IGHV3-64A0A075B6Q5 118 aa8.2□□□□□ -1.1
HPS1-208ENST00000467246 J3QR89 54 aa8.2□□□□□ -1.1
HPS1-208ENST00000467246 ZNF22P17026 224 aaPredicted RBP8.2□□□□□ -1.1
HPS1-208ENST00000467246 DNAJC30Q96LL9 226 aa8.2□□□□□ -1.1
HPS1-208ENST00000467246 INAFM1C9JVW0 142 aa8.2□□□□□ -1.1
HPS1-208ENST00000467246 AMELXQ99217 191 aa8.2□□□□□ -1.1
HPS1-208ENST00000467246 TEP1Q99973 2627 aaKnown RBP8.19□□□□□ -1.1
HPS1-208ENST00000467246 TMEM223A0PJW6 202 aa8.19□□□□□ -1.1
HPS1-208ENST00000467246 FOXI1Q12951 378 aa8.19□□□□□ -1.1
HPS1-208ENST00000467246 FAM110AQ9BQ89 295 aa8.19□□□□□ -1.1
HPS1-208ENST00000467246 UBE2D4Q9Y2X8 147 aa8.19□□□□□ -1.1
HPS1-208ENST00000467246 HIVEP1P15822 2718 aa8.19□□□□□ -1.1
HPS1-208ENST00000467246 TENM1Q9UKZ4 2725 aa8.19□□□□□ -1.1
HPS1-208ENST00000467246 J3QQQ9 107 aa8.19□□□□□ -1.1
HPS1-208ENST00000467246 RRN3P1Q2M238 152 aa8.19□□□□□ -1.1
HPS1-208ENST00000467246 NDUFA11Q86Y39 141 aa8.19□□□□□ -1.1
HPS1-208ENST00000467246 CSNK1G2-AS1Q8NCQ2 148 aa8.19□□□□□ -1.1
HPS1-208ENST00000467246 A0A0J9YY99 117 aa8.18□□□□□ -1.1
HPS1-208ENST00000467246 PLAC8L1A1L4L8 177 aa8.18□□□□□ -1.1
HPS1-208ENST00000467246 PF4P02776 101 aa8.18□□□□□ -1.1
HPS1-208ENST00000467246 SRSF9Q13242 221 aaKnown RBP eCLIP8.18□□□□□ -1.1
HPS1-208ENST00000467246 LINC00482Q8N8I6 264 aa8.17□□□□□ -1.1
HPS1-208ENST00000467246 SCGB1A1P11684 91 aa8.17□□□□□ -1.1
HPS1-208ENST00000467246 LGALS3P17931 250 aaKnown RBP8.17□□□□□ -1.1
HPS1-208ENST00000467246 DAZ2Q13117 558 aaKnown RBP8.17□□□□□ -1.1
HPS1-208ENST00000467246 Q6ZUT4 128 aa8.17□□□□□ -1.1
HPS1-208ENST00000467246 SLC25A29Q8N8R3 303 aa8.17□□□□□ -1.1
HPS1-208ENST00000467246 SPATA3Q8NHX4 192 aa8.17□□□□□ -1.1
HPS1-208ENST00000467246 LEPROTO15243 131 aa8.16□□□□□ -1.1
HPS1-208ENST00000467246 GAGE7O76087 117 aa8.16□□□□□ -1.1
HPS1-208ENST00000467246 GAGE12FP0CL80 117 aa8.16□□□□□ -1.1
HPS1-208ENST00000467246 GAGE12GP0CL81 117 aa8.16□□□□□ -1.1
HPS1-208ENST00000467246 GAGE12IP0CL82 117 aa8.16□□□□□ -1.1
HPS1-208ENST00000467246 MRPS36P82909 103 aaKnown RBP8.16□□□□□ -1.1
HPS1-208ENST00000467246 CARD19Q96LW7 228 aa8.16□□□□□ -1.1
HPS1-208ENST00000467246 SPANXA1Q9NS26 97 aa8.16□□□□□ -1.1
HPS1-208ENST00000467246 TRAV4A0A0B4J268 109 aa8.16□□□□□ -1.1
HPS1-208ENST00000467246 B5MCH6 92 aa8.16□□□□□ -1.1
HPS1-208ENST00000467246 K7EQD1 137 aa8.16□□□□□ -1.1
HPS1-208ENST00000467246 TRBV20-1A0A075B6N2 111 aa8.16□□□□□ -1.1
HPS1-208ENST00000467246 C16orf74Q96GX8 76 aa8.16□□□□□ -1.1
HPS1-208ENST00000467246 C1QTNF4Q9BXJ3 329 aa8.16□□□□□ -1.1
HPS1-208ENST00000467246 H7C2G1 150 aa8.15□□□□□ -1.1
HPS1-208ENST00000467246 NBEAL2Q6ZNJ1 2754 aa8.15□□□□□ -1.1
HPS1-208ENST00000467246 TRGV2A0A075B6R0 118 aa8.15□□□□□ -1.11
HPS1-208ENST00000467246 TRAV8-3A0A0A6YYJ7 113 aa8.15□□□□□ -1.11
HPS1-208ENST00000467246 GAGE12JA6NER3 117 aa8.15□□□□□ -1.11
HPS1-208ENST00000467246 RPL36AP83881 106 aaKnown RBP8.15□□□□□ -1.11
HPS1-208ENST00000467246 GAGE4Q13068 117 aa8.15□□□□□ -1.11
HPS1-208ENST00000467246 GAGE5Q13069 117 aa8.15□□□□□ -1.11
HPS1-208ENST00000467246 NTM-AS1Q6ZSK4 140 aa8.15□□□□□ -1.11
HPS1-208ENST00000467246 RPL36ALQ969Q0 106 aaKnown RBP8.15□□□□□ -1.11
HPS1-208ENST00000467246 LINC00694P0DN24 101 aa8.14□□□□□ -1.11
HPS1-208ENST00000467246 ATRQ13535 2644 aa8.14□□□□□ -1.11
HPS1-208ENST00000467246 TRBV10-1A0A0K0K1A3 114 aa8.14□□□□□ -1.11
HPS1-208ENST00000467246 IGHV3-30-3P0DP02 117 aa8.14□□□□□ -1.11
HPS1-208ENST00000467246 C3orf56Q8N813 242 aa8.14□□□□□ -1.11
HPS1-208ENST00000467246 TMEM238LA0A1B0GVL6 79 aa8.13□□□□□ -1.11
HPS1-208ENST00000467246 IGHV3-30P01768 117 aa8.13□□□□□ -1.11
HPS1-208ENST00000467246 IGHV3-30-5P0DP03 117 aa8.13□□□□□ -1.11
HPS1-208ENST00000467246 LOC100131303A0A0U1RQF7 123 aa8.13□□□□□ -1.11
HPS1-208ENST00000467246 TINCRA0A1B0GVN0 87 aa8.13□□□□□ -1.11
HPS1-208ENST00000467246 TSPAN13O95857 204 aa8.13□□□□□ -1.11
HPS1-208ENST00000467246 UBE2D3P61077 147 aa8.13□□□□□ -1.11
HPS1-208ENST00000467246 UBE2D2P62837 147 aa8.13□□□□□ -1.11
HPS1-208ENST00000467246 DGAT2L7PQ6IED9 249 aa8.13□□□□□ -1.11
HPS1-208ENST00000467246 C10orf126Q8N4M7 172 aa8.13□□□□□ -1.11
HPS1-208ENST00000467246 TIMM21Q9BVV7 248 aa8.13□□□□□ -1.11
HPS1-208ENST00000467246 A8MZ25 164 aa8.12□□□□□ -1.11
HPS1-208ENST00000467246 UBE2D1P51668 147 aa8.12□□□□□ -1.11
HPS1-208ENST00000467246 OVOL2Q9BRP0 275 aa8.12□□□□□ -1.11
HPS1-208ENST00000467246 A6NJY4 79 aa8.12□□□□□ -1.11
HPS1-208ENST00000467246 TCL1BO95988 128 aa8.12□□□□□ -1.11
HPS1-208ENST00000467246 ANAPC13Q9BS18 74 aa8.12□□□□□ -1.11
HPS1-208ENST00000467246 DAZ4Q86SG3 579 aaKnown RBP8.11□□□□□ -1.11
HPS1-208ENST00000467246 DAZ3Q9NR90 486 aaKnown RBP8.11□□□□□ -1.11
HPS1-208ENST00000467246 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.11□□□□□ -1.11
HPS1-208ENST00000467246 IGHV1-58A0A0C4DH39 117 aa8.1□□□□□ -1.11
HPS1-208ENST00000467246 CRLF1O75462 422 aa8.1□□□□□ -1.11
HPS1-208ENST00000467246 CDKN2A-AS1Q9UH64 79 aa8.1□□□□□ -1.11
HPS1-208ENST00000467246 COX6A2Q02221 97 aa8.1□□□□□ -1.11
HPS1-208ENST00000467246 VSIG2Q96IQ7 327 aa8.1□□□□□ -1.11
HPS1-208ENST00000467246 TRGV4A0A0C4DH28 118 aa8.1□□□□□ -1.11
HPS1-208ENST00000467246 A0A0J9YXY3 114 aa8.1□□□□□ -1.11
HPS1-208ENST00000467246 SCGB1C2P0DMR2 95 aa8.1□□□□□ -1.11
HPS1-208ENST00000467246 SBSPONQ8IVN8 264 aa8.1□□□□□ -1.11
HPS1-208ENST00000467246 TRRAPQ9Y4A5 3859 aa8.09□□□□□ -1.11
HPS1-208ENST00000467246 MAST4O15021 2626 aa8.09□□□□□ -1.11
HPS1-208ENST00000467246 CFC1BP0CG36 223 aa8.09□□□□□ -1.11
HPS1-208ENST00000467246 CFC1P0CG37 223 aa8.09□□□□□ -1.11
HPS1-208ENST00000467246 SHISA2Q6UWI4 295 aa8.09□□□□□ -1.11
HPS1-208ENST00000467246 ANKRD29Q8N6D5 301 aa8.09□□□□□ -1.11
HPS1-208ENST00000467246 TRBV6-4A0A1B0GX49 114 aa8.09□□□□□ -1.11
HPS1-208ENST00000467246 FHL2Q14192 279 aa8.09□□□□□ -1.11
HPS1-208ENST00000467246 DEFB130BP0DP73 79 aa8.08□□□□□ -1.12
HPS1-208ENST00000467246 DEFB130AP0DP74 79 aa8.08□□□□□ -1.12
HPS1-208ENST00000467246 ERG28Q9UKR5 140 aa8.08□□□□□ -1.12
HPS1-208ENST00000467246 CCDC179H3BU77 68 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms