RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Olfr1386Q7TQT0 309 aa11.74□□□□□ -0.53
Nup88-202ENSMUST00000108530 Prickle3Q80VL3 624 aa11.74□□□□□ -0.53
Nup88-202ENSMUST00000108530 Sox21Q811W0 276 aa11.74□□□□□ -0.53
Nup88-202ENSMUST00000108530 Vstm2aQ8R0A6 236 aa11.74□□□□□ -0.53
Nup88-202ENSMUST00000108530 Slc25a2Q99ML6 265 aa11.74□□□□□ -0.53
Nup88-202ENSMUST00000108530 Scp2d1Q9DAH1 156 aa11.74□□□□□ -0.53
Nup88-202ENSMUST00000108530 Kcnip2Q9JJ69 270 aa11.74□□□□□ -0.53
Nup88-202ENSMUST00000108530 Ighv5-6A0A075B5Q0 117 aa11.74□□□□□ -0.53
Nup88-202ENSMUST00000108530 Ighv1-69A0A0G2JFS5 117 aa11.74□□□□□ -0.53
Nup88-202ENSMUST00000108530 Olfr1016A2ASV2 309 aa11.74□□□□□ -0.53
Nup88-202ENSMUST00000108530 Cd74P04441 279 aa11.74□□□□□ -0.53
Nup88-202ENSMUST00000108530 Ube2e1P52482 193 aa11.74□□□□□ -0.53
Nup88-202ENSMUST00000108530 Acaa1aQ921H8 424 aaKnown RBP11.74□□□□□ -0.53
Nup88-202ENSMUST00000108530 Igsf23B2RTN2 239 aa11.73□□□□□ -0.53
Nup88-202ENSMUST00000108530 Olfr556E9Q549 324 aa11.73□□□□□ -0.53
Nup88-202ENSMUST00000108530 Il3raP26952 396 aa11.73□□□□□ -0.53
Nup88-202ENSMUST00000108530 Rom1P32958 351 aa11.73□□□□□ -0.53
Nup88-202ENSMUST00000108530 Defb30Q30KN4 75 aa11.73□□□□□ -0.53
Nup88-202ENSMUST00000108530 Znrf2Q71FD5 238 aa11.73□□□□□ -0.53
Nup88-202ENSMUST00000108530 Olfr823Q7TRH2 315 aa11.73□□□□□ -0.53
Nup88-202ENSMUST00000108530 Rbfox2Q8BP71 449 aaKnown RBP11.73□□□□□ -0.53
Nup88-202ENSMUST00000108530 Olfr824Q8VFU4 315 aa11.73□□□□□ -0.53
Nup88-202ENSMUST00000108530 Olfr577Q8VH11 312 aa11.73□□□□□ -0.53
Nup88-202ENSMUST00000108530 Bhlha15Q9QYC3 197 aa11.73□□□□□ -0.53
Nup88-202ENSMUST00000108530 Nubp1Q9R060 320 aa11.73□□□□□ -0.53
Nup88-202ENSMUST00000108530 Olfr1189A2AV11 306 aa11.72□□□□□ -0.53
Nup88-202ENSMUST00000108530 Gm17660B9UIU9 90 aa11.72□□□□□ -0.53
Nup88-202ENSMUST00000108530 Prss32E9Q409 334 aa11.72□□□□□ -0.53
Nup88-202ENSMUST00000108530 Fut9O88819 359 aa11.72□□□□□ -0.53
Nup88-202ENSMUST00000108530 1700009N14RikQ14AA6 216 aaKnown RBP11.72□□□□□ -0.53
Nup88-202ENSMUST00000108530 C1qtnf9Q4ZJN1 333 aa11.72□□□□□ -0.53
Nup88-202ENSMUST00000108530 Hist3h2bbQ8CGP0 126 aa11.72□□□□□ -0.53
Nup88-202ENSMUST00000108530 Hist3h2baQ9D2U9 126 aa11.72□□□□□ -0.53
Nup88-202ENSMUST00000108530 Tmem239Q9DA47 151 aa11.72□□□□□ -0.53
Nup88-202ENSMUST00000108530 Btbd17Q9DB72 478 aa11.72□□□□□ -0.53
Nup88-202ENSMUST00000108530 Gpa33Q9JKA5 319 aa11.72□□□□□ -0.53
Nup88-202ENSMUST00000108530 Mast4Q811L6 2618 aa11.72□□□□□ -0.53
Nup88-202ENSMUST00000108530 Irf2bp2E9Q1P8 570 aa11.72□□□□□ -0.53
Nup88-202ENSMUST00000108530 Gm37988J3QM41 62 aa11.72□□□□□ -0.53
Nup88-202ENSMUST00000108530 Hoxb4P10284 250 aa11.72□□□□□ -0.53
Nup88-202ENSMUST00000108530 PpoxP51175 477 aa11.72□□□□□ -0.53
Nup88-202ENSMUST00000108530 Gm10447Q3UQ92 135 aa11.72□□□□□ -0.53
Nup88-202ENSMUST00000108530 Zfp493E9Q1L8 384 aa11.71□□□□□ -0.53
Nup88-202ENSMUST00000108530 Gm21775J3KMK6 180 aa11.71□□□□□ -0.53
Nup88-202ENSMUST00000108530 Cela2aP05208 271 aa11.71□□□□□ -0.53
Nup88-202ENSMUST00000108530 Ccl21aP84444 133 aa11.71□□□□□ -0.53
Nup88-202ENSMUST00000108530 Ccl21bP86792 133 aa11.71□□□□□ -0.53
Nup88-202ENSMUST00000108530 Ccl21cP86793 133 aa11.71□□□□□ -0.53
Nup88-202ENSMUST00000108530 Pilrb2Q2YFS1 225 aa11.71□□□□□ -0.53
Nup88-202ENSMUST00000108530 Vwc2lQ505H4 222 aa11.71□□□□□ -0.53
Nup88-202ENSMUST00000108530 Fam206aQ80ZQ9 193 aaKnown RBP11.71□□□□□ -0.53
Nup88-202ENSMUST00000108530 Olfr127Q8VF25 323 aa11.71□□□□□ -0.53
Nup88-202ENSMUST00000108530 Shisal2bQ9D1Y9 158 aa11.71□□□□□ -0.53
Nup88-202ENSMUST00000108530 Ms4a4bQ9ES61 226 aa11.71□□□□□ -0.53
Nup88-202ENSMUST00000108530 Pla2g2dQ9WVF6 144 aa11.71□□□□□ -0.53
Nup88-202ENSMUST00000108530 Trav9-1A0A075B601 112 aa11.71□□□□□ -0.54
Nup88-202ENSMUST00000108530 Igkv4-57A0A0A6YYE7 117 aa11.71□□□□□ -0.54
Nup88-202ENSMUST00000108530 Khdc1bP0C7A0 126 aa11.71□□□□□ -0.54
Nup88-202ENSMUST00000108530 Ptbp1P17225 527 aaKnown RBP11.71□□□□□ -0.54
Nup88-202ENSMUST00000108530 Zfp36l1P23950 338 aa11.71□□□□□ -0.54
Nup88-202ENSMUST00000108530 AdtrpQ8C138 230 aa11.71□□□□□ -0.54
Nup88-202ENSMUST00000108530 Olfr346Q8VGJ7 309 aa11.71□□□□□ -0.54
Nup88-202ENSMUST00000108530 Mrpl27Q99N92 148 aa11.71□□□□□ -0.54
Nup88-202ENSMUST00000108530 Olfr609E9Q4X7 319 aa11.7□□□□□ -0.54
Nup88-202ENSMUST00000108530 Zfp708F8VPP0 541 aa11.7□□□□□ -0.54
Nup88-202ENSMUST00000108530 Gstp1P19157 210 aa11.7□□□□□ -0.54
Nup88-202ENSMUST00000108530 Olfr495Q8VF12 330 aa11.7□□□□□ -0.54
Nup88-202ENSMUST00000108530 Pth2Q91W27 100 aa11.7□□□□□ -0.54
Nup88-202ENSMUST00000108530 Rpp25lQ99JH1 163 aa11.7□□□□□ -0.54
Nup88-202ENSMUST00000108530 PigpQ9JHG1 132 aa11.7□□□□□ -0.54
Nup88-202ENSMUST00000108530 Ighv1-20A0A0A6YX66 117 aa11.7□□□□□ -0.54
Nup88-202ENSMUST00000108530 Gm21616B6ZB74 166 aa11.7□□□□□ -0.54
Nup88-202ENSMUST00000108530 Ifna5P07349 189 aa11.7□□□□□ -0.54
Nup88-202ENSMUST00000108530 Gpr183Q3U6B2 357 aa11.7□□□□□ -0.54
Nup88-202ENSMUST00000108530 Spint3Q3UW09 88 aa11.7□□□□□ -0.54
Nup88-202ENSMUST00000108530 Fam173aQ501J2 229 aa11.7□□□□□ -0.54
Nup88-202ENSMUST00000108530 HaaoQ78JT3 286 aa11.7□□□□□ -0.54
Nup88-202ENSMUST00000108530 Olfr958Q8VEY3 312 aa11.7□□□□□ -0.54
Nup88-202ENSMUST00000108530 Vmn1r61W4VSP5 300 aa11.7□□□□□ -0.54
Nup88-202ENSMUST00000108530 Olfr39E9PVX1 319 aa11.69□□□□□ -0.54
Nup88-202ENSMUST00000108530 1700067P10RikG3X8U2 183 aa11.69□□□□□ -0.54
Nup88-202ENSMUST00000108530 Prok1Q14A28 105 aa11.69□□□□□ -0.54
Nup88-202ENSMUST00000108530 Slc25a31Q3V132 320 aa11.69□□□□□ -0.54
Nup88-202ENSMUST00000108530 Smug1Q6P5C5 279 aa11.69□□□□□ -0.54
Nup88-202ENSMUST00000108530 Olfr1295Q8VF48 312 aa11.69□□□□□ -0.54
Nup88-202ENSMUST00000108530 Tbx19Q99ME7 446 aa11.69□□□□□ -0.54
Nup88-202ENSMUST00000108530 Oxld1Q9CR10 201 aa11.69□□□□□ -0.54
Nup88-202ENSMUST00000108530 Mrps11Q9DCA2 191 aaKnown RBP11.69□□□□□ -0.54
Nup88-202ENSMUST00000108530 Olfr959Q9EQ86 311 aa11.69□□□□□ -0.54
Nup88-202ENSMUST00000108530 Gm5129F6YHA9 99 aa11.69□□□□□ -0.54
Nup88-202ENSMUST00000108530 Brs3O54798 399 aa11.69□□□□□ -0.54
Nup88-202ENSMUST00000108530 Gpm6bP35803 328 aa11.69□□□□□ -0.54
Nup88-202ENSMUST00000108530 Col8a1Q00780 744 aa11.69□□□□□ -0.54
Nup88-202ENSMUST00000108530 Gata4Q08369 441 aa11.69□□□□□ -0.54
Nup88-202ENSMUST00000108530 Psg22Q810J1 475 aa11.69□□□□□ -0.54
Nup88-202ENSMUST00000108530 Tusc5Q8C838 173 aa11.69□□□□□ -0.54
Nup88-202ENSMUST00000108530 EppinQ9DA01 134 aa11.69□□□□□ -0.54
Nup88-202ENSMUST00000108530 Arpc1aQ9R0Q6 370 aa11.69□□□□□ -0.54
Nup88-202ENSMUST00000108530 Unc79Q0KK59 2596 aa11.69□□□□□ -0.54
Nup88-202ENSMUST00000108530 Akap6E9Q9K8 2307 aa11.68□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 48.2 ms