RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Trav6-3Q5R1E6 112 aa12.2□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Mbnl3Q8R003 342 aaKnown RBP12.2□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Icam4Q9ERM2 262 aa12.2□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Crim1Q9JLL0 1037 aa12.2□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Trbv19A0A0B4J1H4 117 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Ccl2P10148 148 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Pex7P97865 318 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Lhx2Q9Z0S2 406 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Col9a3A2ACT7 680 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Tac3P55099 116 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Wipf2Q6PEV3 440 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 SergefQ80YD6 464 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Hcfc2Q9D968 241 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Ighv7-4A0A0A6YXL5 121 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Trbv3A0A0A6YYE2 117 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Mtatp8P03930 67 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 RhogP84096 191 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Tff3Q62395 81 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Gpbar1Q80SS6 329 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Rnd1Q8BLR7 232 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Dock1Q8BUR4 1865 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Ighv8-6A0A0A6YXA3 118 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Trbv13-3A0A0B4J1H2 113 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Igh-VJ558P01758 117 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Olfr322Q5NCC8 327 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Wdr31Q9JHB4 367 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Mmp17Q9R0S3 578 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Kiaa0100Q5SYL3 2234 aa12.19□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Tmem141A2AJB2 108 aa12.18□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Rnase2bO35292 155 aa12.18□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Foxl1Q64731 336 aa12.18□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Tm2d3Q8BJ83 261 aa12.18□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Errfi1Q99JZ7 461 aa12.18□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Gm10306Q9CUK2 115 aa12.18□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Crybb3Q9JJU9 211 aa12.18□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 9830107B12RikD3Z5D6 160 aa12.18□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 PigyP0C1P0 71 aa12.18□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Id3P41133 119 aa12.18□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 NracQ8BNX7 165 aa12.18□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Efemp2Q9WVJ9 443 aa12.18□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Supt4h1bQ9Z199 117 aa12.18□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Gm27027S4R1M6 97 aa12.18□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Tmem196V9GX04 182 aa12.18□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 NgfP01139 241 aa12.18□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Mpv17P19258 176 aa12.18□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Tdgf1P51865 171 aa12.18□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Tmem89Q9DA04 169 aa12.18□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Defa7P50705 93 aa12.17□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Gm21370Q3T9V6 190 aa12.17□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Plxna1P70206 1894 aa12.17□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Ighv7-2A0A0A6YX91 119 aa12.17□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Znf385cA2A5E6 429 aa12.17□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Gm11444F6QMA6 170 aa12.17□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Zfp27P10077 819 aa12.17□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Defb46Q4QY34 57 aa12.17□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Hapln4Q80WM4 400 aa12.17□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Spink2Q8BMY7 86 aa12.17□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Rln3Q8CHK2 141 aa12.17□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 CklfQ9DAS1 152 aa12.17□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Ighv5-4A0A075B5P9 117 aa12.17□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Trav16d-dv11A0A075B617 117 aa12.17□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Hoxb2P0C1T1 354 aa12.17□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Defa16P50714 93 aa12.17□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Gpr82Q8BZR0 328 aa12.17□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Lyzl1Q9CPX3 148 aa12.17□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Sbf2E9PXF8 1872 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Trav7n-5A0A075B604 112 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Gm29289A0A087WPY7 166 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Gm4064A0A087WR82 380 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Gm10352B2RWR6 380 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Gm12169F2Z474 250 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 H3BKT1 185 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Spint5J3KMK8 105 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Gm21693J3QK27 380 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Rbmy1a1O35698 380 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Efna2P52801 209 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Il25Q8VHH8 169 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 HilpdaQ9JLS0 64 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Foxc2Q61850 494 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Vmn1r216Q8R257 298 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Tspan13Q9D8C2 204 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Myo7aP97479 2215 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Mbd6Q3TY92 1003 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Gm20379A0A087WR34 119 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Trav7-5A0A0G2JFX6 112 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 BokO35425 213 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Clpsl2Q3UW21 102 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Dmrt3Q80WT2 476 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 PifoQ9D9W1 207 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Kif26bQ7TNC6 2112 aa12.16□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 TcraP01849 138 aa12.15□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Gm4894Q8CA09 118 aa12.15□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Rhno1Q8K3A4 235 aa12.15□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Ckap5A2AGT5 2032 aaKnown RBP12.15□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Gm12888Q3UW77 119 aa12.15□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Slc25a39Q9D8K8 359 aa12.15□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Zdhhc16Q9ESG8 361 aa12.15□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Zfp36l2P23949 484 aaKnown RBP12.15□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Znf260Q62513 407 aa12.15□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Gm10277Q6R5C6 214 aa12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms