RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Olfr779E9PUS9 130 aa12.26□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Tmem241Q3UME2 297 aa12.26□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 SlaQ60898 281 aa12.26□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Klk13Q8CGR6 276 aa12.26□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 St6galnac6Q9JM95 333 aa12.26□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Tmem136Q3TYE7 245 aa12.25□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Cela3bQ9CQ52 269 aa12.25□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Brca1P48754 1812 aa12.25□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Igkv14-126A0A075B5K0 117 aa12.25□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Igkv9-123A0A140T8N8 117 aa12.25□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 CfdP03953 259 aa12.25□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Hist1h2bmP10854 126 aa12.25□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Adra2aQ01338 450 aa12.25□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 SnrpcQ62241 159 aa12.25□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Hist1h2bhQ64478 126 aa12.25□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Hist2h2bbQ64525 126 aa12.25□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Hist1h2bcQ6ZWY9 126 aaKnown RBP12.25□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Asphd1Q2TA57 360 aa12.25□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Vamp8O70404 101 aa12.25□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Olfr498Q8VEW2 330 aa12.25□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Sh3bgrl3Q91VW3 93 aa12.25□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Gm14214V9GX35 225 aa12.25□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Igh-3P01867 404 aa12.24□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Pax9P47242 342 aa12.24□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Mrps21P58059 87 aa12.24□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 BC106179Q8C9L1 186 aa12.24□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Ighv5-9A0A075B5Q2 117 aa12.24□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Nhlrc1Q8BR37 401 aa12.24□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Gm21616B6ZB74 166 aa12.24□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Ucp1P12242 307 aa12.24□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Hs3st6Q5GFD5 342 aa12.24□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Psme4Q5SSW2 1843 aa12.24□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Ighv7-2A0A0A6YX91 119 aa12.24□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Zfp72Q0VFY0 435 aa12.24□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Reg1P43137 165 aa12.24□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Gm10803Q3TZS6 135 aa12.24□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Gm4894Q8CA09 118 aa12.24□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Ms4a8Q99N10 290 aa12.24□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Igh-VJ558P01758 117 aa12.23□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Gm10842Q3U587 122 aa12.23□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Pgpep1lQ9CWB5 130 aa12.23□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 P01655 112 aa12.23□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 P01726 129 aa12.23□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Saa3P04918 122 aa12.23□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 RhogP84096 191 aa12.23□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Gng5Q80SZ7 68 aa12.23□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Malrd1A2AJX4 2123 aa12.23□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Ighv1-22A0A075B5U7 117 aa12.23□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Gm12355A2A4X6 163 aa12.23□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Ly6lH3BJG9 140 aa12.23□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Smad7O35253 426 aa12.23□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 P18526 117 aa12.23□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Timp3P39876 211 aa12.23□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Neurog3P70661 214 aa12.23□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Srsf3P84104 164 aaKnown RBP12.23□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Olfr484Q8VFD3 321 aa12.23□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Sod1P08228 154 aaKnown RBP12.22□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Zfp36l2P23949 484 aaKnown RBP12.22□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 UngP97931 306 aa12.22□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Spsb3Q571F5 354 aa12.22□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Slc17a9Q8VCL5 447 aa12.22□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Ndufa7Q9Z1P6 113 aaKnown RBP12.22□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Thap8E9Q695 213 aa12.22□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Egr1P08046 533 aa12.22□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Trav7n-4A0A075B620 113 aa12.22□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Folr2Q05685 251 aa12.22□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Gm10912Q3UXH0 145 aa12.22□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Trav19A0A0B4J1K4 119 aa12.22□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Zfp950A0A0U1RQ46 609 aa12.22□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Rnf217D3YYI7 515 aa12.22□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Smlr1J3QMJ4 66 aa12.22□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Dnase2P56542 353 aa12.22□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Supt4h1aP63271 117 aa12.22□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 AdmP97297 184 aa12.22□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Olfr1323Q8VF35 309 aa12.22□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Itgb1bp1O35671 200 aa12.21□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 YrdcQ3U5F4 280 aa12.21□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Lypd1Q8BLC3 141 aa12.21□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Q91WE4 72 aa12.21□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Nat6Q9R123 314 aa12.21□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Trdv1A0A075B657 112 aa12.21□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Colca2F8VPY8 239 aa12.21□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Sec11aQ9R0P6 179 aa12.21□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Opn3Q9WUK7 400 aa12.21□□□□□ -0.45
Pcdh20-201ENSMUST00000061628 Zfp646Q6NV66 1788 aa12.21□□□□□ -0.46
Pcdh20-201ENSMUST00000061628 4931422A03RikA2BHN9 113 aa12.21□□□□□ -0.46
Pcdh20-201ENSMUST00000061628 Cited2O35740 269 aa12.21□□□□□ -0.46
Pcdh20-201ENSMUST00000061628 Olfr1381Q7TQT4 311 aa12.21□□□□□ -0.46
Pcdh20-201ENSMUST00000061628 Thy1P01831 162 aa12.21□□□□□ -0.46
Pcdh20-201ENSMUST00000061628 SeleQ00690 612 aa12.21□□□□□ -0.46
Pcdh20-201ENSMUST00000061628 Gm10447Q3UQ92 135 aa12.21□□□□□ -0.46
Pcdh20-201ENSMUST00000061628 EpopQ7TNS8 369 aa12.21□□□□□ -0.46
Pcdh20-201ENSMUST00000061628 Rhno1Q8K3A4 235 aa12.21□□□□□ -0.46
Pcdh20-201ENSMUST00000061628 Prss58Q8BW11 241 aa12.2□□□□□ -0.46
Pcdh20-201ENSMUST00000061628 RetnlgQ8K426 117 aa12.2□□□□□ -0.46
Pcdh20-201ENSMUST00000061628 Dkk2Q9QYZ8 259 aa12.2□□□□□ -0.46
Pcdh20-201ENSMUST00000061628 Dock8Q8C147 2100 aa12.2□□□□□ -0.46
Pcdh20-201ENSMUST00000061628 Ighv1-7A0A075B5T7 117 aa12.2□□□□□ -0.46
Pcdh20-201ENSMUST00000061628 Trav21-dv12A0A075B6C4 109 aa12.2□□□□□ -0.46
Pcdh20-201ENSMUST00000061628 Il1f10Q8R459 152 aa12.2□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms