RNA–Protein interactions for RNA: snR85

snR85, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR85, Length 171 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR85	snR85	MNN2	P38069	597 aa		0.97	□□□□□ -2.25
snR85	snR85	CAP1	P28495	268 aa	Known RBP	0.96	□□□□□ -2.26
snR85	snR85	NIC96	P34077	839 aa		0.96	□□□□□ -2.26
snR85	snR85	MTC2	P34246	357 aa		0.96	□□□□□ -2.26
snR85	snR85	RAD26	P40352	1085 aa		0.96	□□□□□ -2.26
snR85	snR85	GSM1	P42950	618 aa		0.96	□□□□□ -2.26
snR85	snR85	TAF8	Q03750	510 aa		0.96	□□□□□ -2.26
snR85	snR85	RAD33	Q04231	177 aa		0.96	□□□□□ -2.26
snR85	snR85	YPS7	Q06325	596 aa		0.96	□□□□□ -2.26
snR85	snR85	YLL056C	Q12177	298 aa		0.96	□□□□□ -2.26
snR85	snR85	PRP22	P24384	1145 aa	Known RBP	0.95	□□□□□ -2.26
snR85	snR85	MNN4	P36044	1178 aa		0.95	□□□□□ -2.26
snR85	snR85	EFM2	P38347	419 aa		0.95	□□□□□ -2.26
snR85	snR85	NAT1	P12945	854 aa	Known RBP	0.94	□□□□□ -2.26
snR85	snR85	PDA1	P16387	420 aa	Known RBP	0.94	□□□□□ -2.26
snR85	snR85	HNM1	P19807	563 aa		0.94	□□□□□ -2.26
snR85	snR85	BET3	P36149	193 aa		0.94	□□□□□ -2.26
snR85	snR85	YJR061W	P40355	935 aa		0.94	□□□□□ -2.26
snR85	snR85	YJL107C	P42947	387 aa		0.94	□□□□□ -2.26
snR85	snR85	CRT10	Q08226	957 aa		0.94	□□□□□ -2.26
snR85	snR85	CRG1	P38892	291 aa	RIP-Chip data	0.93	□□□□□ -2.26	not detected
snR85	snR85	ASG1	P40467	964 aa		0.93	□□□□□ -2.26
snR85	snR85	SMK1	P41808	388 aa		0.93	□□□□□ -2.26
snR85	snR85	PSP1	P50896	841 aa	Known RBP	0.93	□□□□□ -2.26
snR85	snR85	YMR254C	Q04838	102 aa		0.93	□□□□□ -2.26
snR85	snR85	PPT2	Q12036	173 aa		0.93	□□□□□ -2.26
snR85	snR85	PCK1	P10963	549 aa		0.92	□□□□□ -2.26
snR85	snR85	IMG2	P25642	146 aa	Predicted RBP	0.92	□□□□□ -2.26
snR85	snR85	ASF1	P32447	279 aa		0.92	□□□□□ -2.26
snR85	snR85	CIR1	P42940	261 aa		0.92	□□□□□ -2.26
snR85	snR85	YJR039W	P47107	1121 aa		0.92	□□□□□ -2.26
snR85	snR85	RNY1	Q02933	434 aa	Known RBP	0.92	□□□□□ -2.26
snR85	snR85	YOR389W	Q08912	624 aa		0.92	□□□□□ -2.26
snR85	snR85	DAP1	Q12091	152 aa		0.92	□□□□□ -2.26
snR85	snR85	IME1	P21190	360 aa		0.91	□□□□□ -2.26
snR85	snR85	ERV46	P39727	415 aa		0.91	□□□□□ -2.26
snR85	snR85	NUG1	P40010	520 aa	Known RBP	0.91	□□□□□ -2.26
snR85	snR85	BUD8	P41698	603 aa		0.91	□□□□□ -2.26
snR85	snR85	MAL11	P53048	616 aa		0.91	□□□□□ -2.26
snR85	snR85	SNP1	Q00916	300 aa	Predicted RBP	0.91	□□□□□ -2.26
snR85	snR85	COG8	Q04632	607 aa		0.91	□□□□□ -2.26
snR85	snR85	LYS21	Q12122	440 aa	Known RBP	0.91	□□□□□ -2.26
snR85	snR85	OSH2	Q12451	1283 aa		0.91	□□□□□ -2.26
snR85	snR85	YPK1	P12688	680 aa	Known RBP	0.9	□□□□□ -2.27
snR85	snR85	HSP60	P19882	572 aa	Known RBP	0.9	□□□□□ -2.27
snR85	snR85	RPS2	P25443	254 aa	Known RBP	0.9	□□□□□ -2.27
snR85	snR85	HEM3	P28789	327 aa		0.9	□□□□□ -2.27
snR85	snR85	YEL025C	P39991	1188 aa		0.9	□□□□□ -2.27
snR85	snR85	FTR1	P40088	404 aa		0.9	□□□□□ -2.27
snR85	snR85	YGL242C	P53066	181 aa		0.9	□□□□□ -2.27
snR85	snR85	ACS1	Q01574	713 aa		0.9	□□□□□ -2.27
snR85	snR85	IZH1	Q03419	316 aa		0.9	□□□□□ -2.27
snR85	snR85	DIN7	Q12086	430 aa		0.9	□□□□□ -2.27
snR85	snR85	CIT1	P00890	479 aa		0.89	□□□□□ -2.27
snR85	snR85	CIT2	P08679	460 aa		0.89	□□□□□ -2.27
snR85	snR85	PXA1	P41909	870 aa		0.89	□□□□□ -2.27
snR85	snR85	ESBP6	P53918	673 aa		0.89	□□□□□ -2.27
snR85	snR85	NHX1	Q04121	633 aa		0.89	□□□□□ -2.27
snR85	snR85	HLR1	Q04429	423 aa		0.89	□□□□□ -2.27
snR85	snR85	ARR3	Q06598	404 aa		0.89	□□□□□ -2.27
snR85	snR85	RTC1	Q08281	1341 aa		0.89	□□□□□ -2.27
snR85	snR85	GLN4	P13188	809 aa	Known RBP	0.88	□□□□□ -2.27
snR85	snR85	GDA1	P32621	518 aa		0.88	□□□□□ -2.27
snR85	snR85	KES1	P35844	434 aa	Known RBP	0.88	□□□□□ -2.27
snR85	snR85	YNL092W	P53934	400 aa		0.88	□□□□□ -2.27
snR85	snR85	GPD1	Q00055	391 aa	Known RBP	0.88	□□□□□ -2.27
snR85	snR85	ARP9	Q05123	467 aa		0.88	□□□□□ -2.27
snR85	snR85	RAD34	Q06665	692 aa		0.88	□□□□□ -2.27
snR85	snR85	YLR112W	Q12130	139 aa		0.88	□□□□□ -2.27
snR85	snR85	STO1	P34160	861 aa	Known RBP	0.87	□□□□□ -2.27
snR85	snR85	CDS1	P38221	457 aa		0.87	□□□□□ -2.27
snR85	snR85	PRE4	P30657	266 aa		0.86	□□□□□ -2.27
snR85	snR85	NOP2	P40991	618 aa	Known RBP	0.86	□□□□□ -2.27
snR85	snR85	CAF16	P43569	289 aa		0.86	□□□□□ -2.27
snR85	snR85	MTD1	Q02046	320 aa	Known RBP	0.86	□□□□□ -2.27
snR85	snR85	DCS2	Q12123	353 aa		0.86	□□□□□ -2.27
snR85	snR85	GRX1	P25373	110 aa	Known RBP	0.85	□□□□□ -2.27
snR85	snR85	ARN1	P38731	627 aa		0.85	□□□□□ -2.27
snR85	snR85	BEM4	P39011	633 aa		0.85	□□□□□ -2.27
snR85	snR85	ATG27	P46989	271 aa		0.85	□□□□□ -2.27
snR85	snR85	VPS25	P47142	202 aa		0.85	□□□□□ -2.27
snR85	snR85	MSH1	P25846	959 aa		0.84	□□□□□ -2.27
snR85	snR85	YEL045C	P32616	141 aa		0.84	□□□□□ -2.27
snR85	snR85	RAD24	P32641	659 aa		0.84	□□□□□ -2.27
snR85	snR85	YKU70	P32807	602 aa		0.84	□□□□□ -2.27
snR85	snR85	VAC8	P39968	578 aa		0.84	□□□□□ -2.27
snR85	snR85	LRO1	P40345	661 aa		0.84	□□□□□ -2.27
snR85	snR85	ORC5	P50874	479 aa		0.84	□□□□□ -2.27
snR85	snR85	ALD6	P54115	500 aa	Known RBP	0.84	□□□□□ -2.27
snR85	snR85	GAL11	P19659	1081 aa		0.83	□□□□□ -2.28
snR85	snR85	PRS1	P32895	427 aa	Known RBP	0.83	□□□□□ -2.28
snR85	snR85	PBP2	P38151	413 aa	Known RBP RIP-Chip data	0.83	□□□□□ -2.28	not detected
snR85	snR85	RTA1	P53047	317 aa		0.83	□□□□□ -2.28
snR85	snR85	BAR1	P12630	587 aa		0.82	□□□□□ -2.28
snR85	snR85	RRP43	P25359	394 aa	Predicted RBP	0.82	□□□□□ -2.28
snR85	snR85	RIM2	P38127	377 aa		0.82	□□□□□ -2.28
snR85	snR85	YGR125W	P53273	1036 aa		0.82	□□□□□ -2.28
snR85	snR85	PPN1	Q04119	674 aa		0.82	□□□□□ -2.28
snR85	snR85	MSN2	P33748	704 aa		0.81	□□□□□ -2.28
snR85	snR85	EHT1	P38295	451 aa		0.81	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms