RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 FMP46P36141 133 aaKnown RBP2.03□□□□□ -2.08
snR55snR55 FTH1P38310 465 aa2.03□□□□□ -2.08
snR55snR55 MET30P39014 640 aa2.03□□□□□ -2.08
snR55snR55 RET2P43621 546 aa2.03□□□□□ -2.08
snR55snR55 HOS2P53096 452 aaPredicted RBP2.03□□□□□ -2.08
snR55snR55 RAD33Q04231 177 aa2.03□□□□□ -2.08
snR55snR55 YOL098CQ12496 1037 aa2.03□□□□□ -2.08
snR55snR55 RPS21BQ3E754 87 aaKnown RBP2.03□□□□□ -2.08
snR55snR55 YFL068WP0CX99 160 aa2.02□□□□□ -2.09
snR55snR55 YLL066W-AP0CY00 160 aa2.02□□□□□ -2.09
snR55snR55 YLL067W-AP0CY01 160 aa2.02□□□□□ -2.09
snR55snR55 HMG2P12684 1045 aa2.02□□□□□ -2.09
snR55snR55 YPK1P12688 680 aaKnown RBP2.02□□□□□ -2.09
snR55snR55 GLN4P13188 809 aaKnown RBP2.02□□□□□ -2.09
snR55snR55 CDC26P14724 124 aa2.02□□□□□ -2.09
snR55snR55 RTT107P38850 1070 aa2.02□□□□□ -2.09
snR55snR55 BFA1P47113 574 aa2.02□□□□□ -2.09
snR55snR55 AIM41Q12032 185 aa2.02□□□□□ -2.09
snR55snR55 GET3Q12154 354 aaKnown RBP2.02□□□□□ -2.09
snR55snR55 Q0010Q9ZZX9 128 aa2.02□□□□□ -2.09
snR55snR55 VPS33P20795 691 aa2.01□□□□□ -2.09
snR55snR55 THI4P32318 326 aa2.01□□□□□ -2.09
snR55snR55 TOM71P38825 639 aaKnown RBP2.01□□□□□ -2.09
snR55snR55 YJL193WP39542 402 aa2.01□□□□□ -2.09
snR55snR55 YIL169CP40442 995 aa2.01□□□□□ -2.09
snR55snR55 PFA4Q12006 378 aa2.01□□□□□ -2.09
snR55snR55 MF(ALPHA)2P32435 120 aa2□□□□□ -2.09
snR55snR55 CDC5P32562 705 aa2□□□□□ -2.09
snR55snR55 YKL091CP33324 310 aaKnown RBP2□□□□□ -2.09
snR55snR55 YHR033WP38690 423 aa2□□□□□ -2.09
snR55snR55 TDA3P38758 523 aa2□□□□□ -2.09
snR55snR55 HXT6P39003 570 aaKnown RBP2□□□□□ -2.09
snR55snR55 HXT7P39004 570 aa2□□□□□ -2.09
snR55snR55 MGS1P40151 587 aa2□□□□□ -2.09
snR55snR55 NNF1P47149 201 aa2□□□□□ -2.09
snR55snR55 VTC3Q02725 835 aa2□□□□□ -2.09
snR55snR55 ARA2Q04212 335 aa2□□□□□ -2.09
snR55snR55 RAD34Q06665 692 aa2□□□□□ -2.09
snR55snR55 SEC65P29478 273 aa1.99□□□□□ -2.09
snR55snR55 YBR139WP38109 508 aa1.99□□□□□ -2.09
snR55snR55 FAT1P38225 669 aa1.99□□□□□ -2.09
snR55snR55 SKP2P42843 763 aa1.99□□□□□ -2.09
snR55snR55 CRT10Q08226 957 aa1.99□□□□□ -2.09
snR55snR55 RTC1Q08281 1341 aa1.98□□□□□ -2.09
snR55snR55 RRP43P25359 394 aaPredicted RBP1.98□□□□□ -2.09
snR55snR55 RMA1P36001 430 aaKnown RBP1.98□□□□□ -2.09
snR55snR55 OAF3P36023 863 aa1.98□□□□□ -2.09
snR55snR55 ERV46P39727 415 aa1.98□□□□□ -2.09
snR55snR55 YND1P40009 630 aa1.98□□□□□ -2.09
snR55snR55 VID28P40547 921 aa1.98□□□□□ -2.09
snR55snR55 YNL193WP53870 558 aa1.98□□□□□ -2.09
snR55snR55 YML119WQ03208 357 aa1.98□□□□□ -2.09
snR55snR55 ECM16Q04217 1267 aaKnown RBP1.98□□□□□ -2.09
snR55snR55 LYS21Q12122 440 aaKnown RBP1.98□□□□□ -2.09
snR55snR55 ILS1P09436 1072 aaKnown RBP1.97□□□□□ -2.09
snR55snR55 PCK1P10963 549 aa1.97□□□□□ -2.09
snR55snR55 SEC18P18759 758 aaKnown RBP1.97□□□□□ -2.09
snR55snR55 AMD2P22580 549 aa1.97□□□□□ -2.09
snR55snR55 CNA1P23287 553 aa1.97□□□□□ -2.09
snR55snR55 PPZ1P26570 692 aa1.97□□□□□ -2.09
snR55snR55 DSS4P32601 143 aa1.97□□□□□ -2.09
snR55snR55 YJR096WP47137 282 aa1.97□□□□□ -2.09
snR55snR55 ECM9Q02202 377 aa1.97□□□□□ -2.09
snR55snR55 TFB2Q02939 513 aa1.97□□□□□ -2.09
snR55snR55 DIG1Q03063 452 aaKnown RBP1.97□□□□□ -2.09
snR55snR55 RPL42AP0CX27 106 aaKnown RBP1.96□□□□□ -2.1
snR55snR55 RPL42BP0CX28 106 aaKnown RBP1.96□□□□□ -2.1
snR55snR55 KES1P35844 434 aaKnown RBP1.96□□□□□ -2.1
snR55snR55 SCO2P38072 301 aa1.96□□□□□ -2.1
snR55snR55 SDH8P38345 138 aa1.96□□□□□ -2.1
snR55snR55 CKB2P38930 258 aa1.96□□□□□ -2.1
snR55snR55 MNN1P39106 762 aa1.96□□□□□ -2.1
snR55snR55 VPS8P39702 1274 aa1.96□□□□□ -2.1
snR55snR55 CIR1P42940 261 aa1.96□□□□□ -2.1
snR55snR55 YPT11P48559 417 aa1.96□□□□□ -2.1
snR55snR55 BET4Q00618 327 aa1.96□□□□□ -2.1
snR55snR55 ACS1Q01574 713 aa1.96□□□□□ -2.1
snR55snR55 MTD1Q02046 320 aaKnown RBP1.96□□□□□ -2.1
snR55snR55 HFI1Q12060 488 aa1.96□□□□□ -2.1
snR55snR55 TUF1P02992 437 aaKnown RBP1.95□□□□□ -2.1
snR55snR55 CHO2P05374 869 aaKnown RBP1.95□□□□□ -2.1
snR55snR55 RPS21AP0C0V8 87 aaKnown RBP1.95□□□□□ -2.1
snR55snR55 BET2P20133 325 aa1.95□□□□□ -2.1
snR55snR55 SFP1P32432 683 aa1.95□□□□□ -2.1
snR55snR55 VRG4P40107 337 aa1.95□□□□□ -2.1
snR55snR55 YGR153WP48238 217 aa1.95□□□□□ -2.1
snR55snR55 NOP7P53261 605 aaKnown RBP1.95□□□□□ -2.1
snR55snR55 LCB4Q12246 624 aa1.95□□□□□ -2.1
snR55snR55 RRI1Q12468 440 aa1.95□□□□□ -2.1
snR55snR55 APM4Q99186 491 aa1.95□□□□□ -2.1
snR55snR55 DHH1P39517 506 aaKnown RBP1.94□□□□□ -2.1
snR55snR55 SAP1P39955 897 aaKnown RBP1.94□□□□□ -2.1
snR55snR55 UBP7P40453 1071 aa1.94□□□□□ -2.1
snR55snR55 NOP2P40991 618 aaKnown RBP1.94□□□□□ -2.1
snR55snR55 YJL107CP42947 387 aa1.94□□□□□ -2.1
snR55snR55 SAD1P43589 448 aa1.94□□□□□ -2.1
snR55snR55 COG2P53271 262 aa1.94□□□□□ -2.1
snR55snR55 YNL058CP53947 316 aa1.94□□□□□ -2.1
snR55snR55 POB3Q04636 552 aaKnown RBP1.94□□□□□ -2.1
snR55snR55 SMA2Q04658 369 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms