RNA–Protein interactions for RNA: YPR057W

BRR1, Transcript of snRNP protein component of spliceosomal snRNPs, yeastyeast

Gene BRR1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR1YPR057W LAM1P38851 1228 aa9.63□□□□□ -0.87
BRR1YPR057W REV7P38927 245 aa9.63□□□□□ -0.87
BRR1YPR057W TDA10P42938 290 aa9.63□□□□□ -0.87
BRR1YPR057W VPS25P47142 202 aa9.63□□□□□ -0.87
BRR1YPR057W CEG1Q01159 459 aaPredicted RBP9.63□□□□□ -0.87
BRR1YPR057W ARA2Q04212 335 aa9.63□□□□□ -0.87
BRR1YPR057W MRI1Q06489 411 aaKnown RBP9.63□□□□□ -0.87
BRR1YPR057W PMT7Q06644 662 aa9.63□□□□□ -0.87
BRR1YPR057W MRN1Q08925 612 aaKnown RBP RIP-Chip data9.63□□□□□ -0.87not detected
BRR1YPR057W ERR1P0CX10 437 aa9.62□□□□□ -0.87
BRR1YPR057W ERR2P0CX11 437 aa9.62□□□□□ -0.87
BRR1YPR057W MET16P18408 261 aaPredicted RBP9.62□□□□□ -0.87
BRR1YPR057W KES1P35844 434 aaKnown RBP9.62□□□□□ -0.87
BRR1YPR057W ETR1P38071 380 aa9.62□□□□□ -0.87
BRR1YPR057W RFS1P38234 210 aaKnown RBP9.62□□□□□ -0.87
BRR1YPR057W YAT2P40017 923 aa9.62□□□□□ -0.87
BRR1YPR057W FIR1P40020 876 aa9.62□□□□□ -0.87
BRR1YPR057W MRX1P40050 688 aa9.62□□□□□ -0.87
BRR1YPR057W MAF1P41910 395 aa9.62□□□□□ -0.87
BRR1YPR057W ERR3P42222 437 aa9.62□□□□□ -0.87
BRR1YPR057W YFL052WP43551 465 aa9.62□□□□□ -0.87
BRR1YPR057W YJL132WP47014 750 aa9.62□□□□□ -0.87
BRR1YPR057W MTD1Q02046 320 aaKnown RBP9.62□□□□□ -0.87
BRR1YPR057W YMR160WQ03823 816 aa9.62□□□□□ -0.87
BRR1YPR057W GRX8Q05926 109 aa9.62□□□□□ -0.87
BRR1YPR057W ECM22Q05958 814 aaPredicted RBP9.62□□□□□ -0.87
BRR1YPR057W AAD15Q08361 143 aa9.62□□□□□ -0.87
BRR1YPR057W SAM3Q08986 587 aa9.62□□□□□ -0.87
BRR1YPR057W SPE3Q12074 293 aaKnown RBP9.62□□□□□ -0.87
BRR1YPR057W PUF2Q12221 1075 aaKnown RBP RIP-Chip data9.62□□□□□ -0.87not detected
BRR1YPR057W SSC1P0CS90 654 aaKnown RBP9.61□□□□□ -0.87
BRR1YPR057W GPA2P10823 449 aa9.61□□□□□ -0.87
BRR1YPR057W PMI40P29952 429 aaKnown RBP9.61□□□□□ -0.87
BRR1YPR057W UTR2P32623 467 aa9.61□□□□□ -0.87
BRR1YPR057W GCS1P35197 352 aa9.61□□□□□ -0.87
BRR1YPR057W YBR062CP38239 180 aa9.61□□□□□ -0.87
BRR1YPR057W TFG1P41895 735 aaPredicted RBP9.61□□□□□ -0.87
BRR1YPR057W YNL144CP53907 740 aa9.61□□□□□ -0.87
BRR1YPR057W YET3Q07451 203 aa9.61□□□□□ -0.87
BRR1YPR057W HOS1Q12214 470 aa9.61□□□□□ -0.87
BRR1YPR057W HIS1P00498 297 aaKnown RBP9.6□□□□□ -0.87
BRR1YPR057W GID7P25569 745 aa9.6□□□□□ -0.87
BRR1YPR057W URA10P30402 227 aa9.6□□□□□ -0.87
BRR1YPR057W TSA1P34760 196 aaKnown RBP9.6□□□□□ -0.87
BRR1YPR057W YEL028WP39989 153 aa9.6□□□□□ -0.87
BRR1YPR057W EDC3P39998 551 aaKnown RBP9.6□□□□□ -0.87
BRR1YPR057W ATM1P40416 690 aa9.6□□□□□ -0.87
BRR1YPR057W RPS10BP46784 105 aaKnown RBP9.6□□□□□ -0.87
BRR1YPR057W LIA1P47120 325 aaKnown RBP9.6□□□□□ -0.87
BRR1YPR057W ARP9Q05123 467 aa9.6□□□□□ -0.87
BRR1YPR057W RPS10AQ08745 105 aaPredicted RBP9.6□□□□□ -0.87
BRR1YPR057W YLR053CQ12026 108 aa9.6□□□□□ -0.87
BRR1YPR057W LCB4Q12246 624 aa9.6□□□□□ -0.87
BRR1YPR057W PRP16P15938 1071 aaPredicted RBP9.59□□□□□ -0.87
BRR1YPR057W ADY2P25613 283 aa9.59□□□□□ -0.87
BRR1YPR057W NIP1P32497 812 aaKnown RBP9.59□□□□□ -0.87
BRR1YPR057W WHI3P34761 661 aaKnown RBP9.59□□□□□ -0.87
BRR1YPR057W YBR225WP38321 900 aa9.59□□□□□ -0.87
BRR1YPR057W LIN1P38852 340 aaPredicted RBP9.59□□□□□ -0.87
BRR1YPR057W COP1P53622 1201 aaKnown RBP9.59□□□□□ -0.87
BRR1YPR057W BIO4P53630 237 aa9.59□□□□□ -0.87
BRR1YPR057W TEP1P53916 434 aa9.59□□□□□ -0.87
BRR1YPR057W PNG1Q02890 363 aa9.59□□□□□ -0.87
BRR1YPR057W BUD22Q04347 519 aaKnown RBP9.59□□□□□ -0.87
BRR1YPR057W NOB1Q08444 459 aaKnown RBP9.59□□□□□ -0.87
BRR1YPR057W YOL087CQ99247 1116 aa9.59□□□□□ -0.87
BRR1YPR057W PRC1P00729 532 aa9.58□□□□□ -0.88
BRR1YPR057W MAS1P10507 462 aa9.58□□□□□ -0.88
BRR1YPR057W AMS1P22855 1083 aa9.58□□□□□ -0.88
BRR1YPR057W PGS1P25578 521 aa9.58□□□□□ -0.88
BRR1YPR057W RAD27P26793 382 aa9.58□□□□□ -0.88
BRR1YPR057W DAL1P32375 460 aa9.58□□□□□ -0.88
BRR1YPR057W PEX5P35056 612 aa9.58□□□□□ -0.88
BRR1YPR057W FUI1P38196 639 aa9.58□□□□□ -0.88
BRR1YPR057W OAF1P39720 1047 aaPredicted RBP9.58□□□□□ -0.88
BRR1YPR057W DPH1P40487 425 aaKnown RBP9.58□□□□□ -0.88
BRR1YPR057W YJL107CP42947 387 aa9.58□□□□□ -0.88
BRR1YPR057W YFL012WP43580 148 aa9.58□□□□□ -0.88
BRR1YPR057W CNN1P43618 361 aa9.58□□□□□ -0.88
BRR1YPR057W SNG1P46950 547 aa9.58□□□□□ -0.88
BRR1YPR057W RTT101P47050 842 aa9.58□□□□□ -0.88
BRR1YPR057W MRX6P48564 524 aa9.58□□□□□ -0.88
BRR1YPR057W NRD1P53617 575 aaKnown RBP RIP-Chip data9.58□□□□□ -0.88not detected
BRR1YPR057W SLU7Q02775 382 aaKnown RBP9.58□□□□□ -0.88
BRR1YPR057W VPS16Q03308 798 aa9.58□□□□□ -0.88
BRR1YPR057W HER2Q03557 464 aa9.58□□□□□ -0.88
BRR1YPR057W INP2Q03824 705 aa9.58□□□□□ -0.88
BRR1YPR057W SHE9Q04172 456 aa9.58□□□□□ -0.88
BRR1YPR057W SLP1Q12232 587 aa9.58□□□□□ -0.88
BRR1YPR057W SVS1Q12254 260 aa9.58□□□□□ -0.88
BRR1YPR057W HSP60P19882 572 aaKnown RBP9.57□□□□□ -0.88
BRR1YPR057W HEM12P32347 362 aaPredicted RBP9.57□□□□□ -0.88
BRR1YPR057W SRP101P32916 621 aa9.57□□□□□ -0.88
BRR1YPR057W YKR051WP36142 418 aa9.57□□□□□ -0.88
BRR1YPR057W CDC27P38042 758 aa9.57□□□□□ -0.88
BRR1YPR057W HEK2P38199 381 aaKnown RBP RIP-Chip data9.57□□□□□ -0.88not detected
BRR1YPR057W PFK26P40433 827 aaKnown RBP9.57□□□□□ -0.88
BRR1YPR057W EMW1P42842 904 aaKnown RBP9.57□□□□□ -0.88
BRR1YPR057W BFA1P47113 574 aa9.57□□□□□ -0.88
BRR1YPR057W TAF6P53040 516 aa9.57□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms