RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	TPO3	Q06451	622 aa		3.79	□□□□□ -1.8
RSA1	YPL193W	TGS1	Q12052	315 aa		3.79	□□□□□ -1.8
RSA1	YPL193W	NOP1	P15646	327 aa	Known RBP	3.78	□□□□□ -1.8
RSA1	YPL193W	LOT5	P34234	306 aa		3.78	□□□□□ -1.8
RSA1	YPL193W	EHT1	P38295	451 aa		3.78	□□□□□ -1.8
RSA1	YPL193W	FLO5	P38894	1075 aa		3.78	□□□□□ -1.8
RSA1	YPL193W	SAP4	P53036	818 aa		3.78	□□□□□ -1.8
RSA1	YPL193W	YPL071C	Q02864	156 aa		3.78	□□□□□ -1.8
RSA1	YPL193W	NUP53	Q03790	475 aa		3.78	□□□□□ -1.8
RSA1	YPL193W	YLR001C	Q07895	862 aa		3.78	□□□□□ -1.8
RSA1	YPL193W	VTH1	P40438	1549 aa		3.78	□□□□□ -1.8
RSA1	YPL193W	VTH2	P40890	1549 aa		3.78	□□□□□ -1.8
RSA1	YPL193W	ULS1	Q08562	1619 aa		3.77	□□□□□ -1.81
RSA1	YPL193W	SWI6	P09959	803 aa		3.77	□□□□□ -1.81
RSA1	YPL193W	BRN1	P38170	754 aa		3.77	□□□□□ -1.81
RSA1	YPL193W	TSC11	P40061	1430 aa		3.77	□□□□□ -1.81
RSA1	YPL193W	MGM1	P32266	881 aa		3.76	□□□□□ -1.81
RSA1	YPL193W	YMR124W	P39523	943 aa	Known RBP	3.76	□□□□□ -1.81
RSA1	YPL193W	PRM2	P40534	656 aa		3.76	□□□□□ -1.81
RSA1	YPL193W	TFB2	Q02939	513 aa		3.76	□□□□□ -1.81
RSA1	YPL193W	MRPL1	Q04599	285 aa		3.76	□□□□□ -1.81
RSA1	YPL193W	POL1	P13382	1468 aa		3.75	□□□□□ -1.81
RSA1	YPL193W	YOR1	P53049	1477 aa		3.75	□□□□□ -1.81
RSA1	YPL193W	HOP1	P20050	605 aa		3.75	□□□□□ -1.81
RSA1	YPL193W	CAP1	P28495	268 aa	Known RBP	3.75	□□□□□ -1.81
RSA1	YPL193W	YPT10	P38146	199 aa		3.75	□□□□□ -1.81
RSA1	YPL193W	YHR033W	P38690	423 aa		3.75	□□□□□ -1.81
RSA1	YPL193W	SAE2	P46946	345 aa		3.75	□□□□□ -1.81
RSA1	YPL193W	HLR1	Q04429	423 aa		3.75	□□□□□ -1.81
RSA1	YPL193W	POB3	Q04636	552 aa	Known RBP	3.75	□□□□□ -1.81
RSA1	YPL193W	SNA4	Q07549	140 aa		3.75	□□□□□ -1.81
RSA1	YPL193W	PCL8	Q08966	492 aa		3.75	□□□□□ -1.81
RSA1	YPL193W	AIM44	Q99299	758 aa		3.75	□□□□□ -1.81
RSA1	YPL193W	SMC4	Q12267	1418 aa		3.75	□□□□□ -1.81
RSA1	YPL193W	GLN4	P13188	809 aa	Known RBP	3.74	□□□□□ -1.81
RSA1	YPL193W	CCL1	P37366	393 aa		3.74	□□□□□ -1.81
RSA1	YPL193W	YAT2	P40017	923 aa		3.74	□□□□□ -1.81
RSA1	YPL193W	YIL092W	P40497	633 aa		3.74	□□□□□ -1.81
RSA1	YPL193W	TDA10	P42938	290 aa		3.74	□□□□□ -1.81
RSA1	YPL193W	RET2	P43621	546 aa		3.74	□□□□□ -1.81
RSA1	YPL193W	SNT2	P53127	1403 aa		3.74	□□□□□ -1.81
RSA1	YPL193W	YNL193W	P53870	558 aa		3.74	□□□□□ -1.81
RSA1	YPL193W	BUD7	Q08754	746 aa		3.74	□□□□□ -1.81
RSA1	YPL193W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.74	□□□□□ -1.81	not detected
RSA1	YPL193W	AIM41	Q12032	185 aa		3.74	□□□□□ -1.81
RSA1	YPL193W	RPS21B	Q3E754	87 aa	Known RBP	3.74	□□□□□ -1.81
RSA1	YPL193W	BI2	P03873	423 aa		3.73	□□□□□ -1.81
RSA1	YPL193W	YER190C-B	P0CX94	160 aa		3.73	□□□□□ -1.81
RSA1	YPL193W	YEL077W-A	P0CX95	160 aa		3.73	□□□□□ -1.81
RSA1	YPL193W	YGR296C-B	P0CX96	160 aa		3.73	□□□□□ -1.81
RSA1	YPL193W	YPL283W-B	P0CX97	160 aa		3.73	□□□□□ -1.81
RSA1	YPL193W	YPR204C-A	P0CX98	160 aa		3.73	□□□□□ -1.81
RSA1	YPL193W	OAF1	P39720	1047 aa	Predicted RBP	3.73	□□□□□ -1.81
RSA1	YPL193W	SPN1	Q06505	410 aa	Predicted RBP	3.73	□□□□□ -1.81
RSA1	YPL193W	ARR3	Q06598	404 aa		3.73	□□□□□ -1.81
RSA1	YPL193W	YCG1	Q06680	1035 aa		3.73	□□□□□ -1.81
RSA1	YPL193W	AHA1	Q12449	350 aa	Known RBP	3.73	□□□□□ -1.81
RSA1	YPL193W	STU1	P38198	1513 aa		3.73	□□□□□ -1.81
RSA1	YPL193W	DNF3	Q12674	1656 aa		3.72	□□□□□ -1.81
RSA1	YPL193W	SNQ2	P32568	1501 aa	Known RBP	3.72	□□□□□ -1.81
RSA1	YPL193W	SEC65	P29478	273 aa		3.72	□□□□□ -1.81
RSA1	YPL193W	IRC7	P43623	340 aa		3.72	□□□□□ -1.81
RSA1	YPL193W	COP1	P53622	1201 aa	Known RBP	3.72	□□□□□ -1.81
RSA1	YPL193W	NSE5	Q03718	556 aa		3.72	□□□□□ -1.81
RSA1	YPL193W	USO1	P25386	1790 aa		3.71	□□□□□ -1.81
RSA1	YPL193W	LRO1	P40345	661 aa		3.71	□□□□□ -1.82
RSA1	YPL193W	IES1	P43579	692 aa		3.71	□□□□□ -1.82
RSA1	YPL193W	LYS20	P48570	428 aa	Known RBP	3.71	□□□□□ -1.82
RSA1	YPL193W	HRD3	Q05787	833 aa		3.71	□□□□□ -1.82
RSA1	YPL193W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.71	□□□□□ -1.82	not detected
RSA1	YPL193W	MYO4	P32492	1471 aa		3.71	□□□□□ -1.82
RSA1	YPL193W	PDR10	P51533	1564 aa		3.71	□□□□□ -1.82
RSA1	YPL193W	YPK1	P12688	680 aa	Known RBP	3.7	□□□□□ -1.82
RSA1	YPL193W	ATO2	P32907	282 aa		3.7	□□□□□ -1.82
RSA1	YPL193W	CFD1	P40558	293 aa		3.7	□□□□□ -1.82
RSA1	YPL193W	SDA1	P53313	767 aa	Known RBP	3.7	□□□□□ -1.82
RSA1	YPL193W	USA1	Q03714	838 aa		3.7	□□□□□ -1.82
RSA1	YPL193W	PDR15	Q04182	1529 aa	Known RBP	3.7	□□□□□ -1.82
RSA1	YPL193W	ARO1	P08566	1588 aa	Known RBP	3.69	□□□□□ -1.82
RSA1	YPL193W	YJU2	P28320	278 aa	Predicted RBP	3.69	□□□□□ -1.82
RSA1	YPL193W	CKB2	P38930	258 aa		3.69	□□□□□ -1.82
RSA1	YPL193W	MGS1	P40151	587 aa		3.69	□□□□□ -1.82
RSA1	YPL193W	YGR153W	P48238	217 aa		3.69	□□□□□ -1.82
RSA1	YPL193W	YDL183C	P48569	320 aa		3.69	□□□□□ -1.82
RSA1	YPL193W	SRL1	Q08673	210 aa		3.69	□□□□□ -1.82
RSA1	YPL193W	NDD1	Q08887	554 aa		3.69	□□□□□ -1.82
RSA1	YPL193W	CHC1	P22137	1653 aa	Known RBP	3.68	□□□□□ -1.82
RSA1	YPL193W	YCP4	P25349	247 aa	Known RBP	3.68	□□□□□ -1.82
RSA1	YPL193W	MTC7	P32633	139 aa		3.68	□□□□□ -1.82
RSA1	YPL193W	YIR016W	P40572	265 aa		3.68	□□□□□ -1.82
RSA1	YPL193W	YJR096W	P47137	282 aa		3.68	□□□□□ -1.82
RSA1	YPL193W	RPL15B	P54780	204 aa	Predicted RBP	3.68	□□□□□ -1.82
RSA1	YPL193W	CYK3	Q07533	885 aa		3.68	□□□□□ -1.82
RSA1	YPL193W	IQG1	Q12280	1495 aa		3.67	□□□□□ -1.82
RSA1	YPL193W	PDR12	Q02785	1511 aa		3.67	□□□□□ -1.82
RSA1	YPL193W	GDB1	Q06625	1536 aa		3.67	□□□□□ -1.82
RSA1	YPL193W	YEL076C-A	P0CX16	216 aa		3.67	□□□□□ -1.82
RSA1	YPL193W	YLR464W	P0CX17	216 aa		3.67	□□□□□ -1.82
RSA1	YPL193W	COQ3	P27680	312 aa		3.67	□□□□□ -1.82
RSA1	YPL193W	PRP19	P32523	503 aa	Known RBP	3.67	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 78.5 ms